SRR1545743_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545743_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	505262
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1710	0.3384382755877149	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1702	0.33685493862590105	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCATTA	25	3.8876908E-5	45.000004	20
ACCGGGT	20	7.0295297E-4	45.0	4
CGTTCGA	20	7.0295297E-4	45.0	14
TAGCCCG	35	1.2101191E-7	45.0	11
TGCGTAA	40	6.8012014E-9	45.0	1
CGTTTTA	805	0.0	44.16149	1
GTACGGG	85	0.0	42.35294	3
AGGCGAT	325	0.0	42.23077	7
TACGGGA	80	0.0	42.1875	4
ATTCGGC	55	6.002665E-11	40.909092	17
CCGCTCG	55	6.002665E-11	40.909092	19
CGTTTTT	1310	0.0	40.70611	1
TACGAAG	50	1.0786607E-9	40.500004	2
CGTAAAG	50	1.0786607E-9	40.500004	2
TACCTGG	315	0.0	40.0	10
CATATGC	310	0.0	39.919353	33
TATGGGC	85	0.0	39.705883	4
CGACGGT	125	0.0	39.6	28
CGGTCTA	125	0.0	39.6	31
ACGACGG	125	0.0	39.6	27