##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545743_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 505262 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.931823489595498 31.0 31.0 33.0 30.0 33.0 2 31.097375223151552 31.0 31.0 33.0 30.0 34.0 3 31.043553641477097 31.0 31.0 34.0 28.0 34.0 4 35.029066108276496 35.0 35.0 37.0 32.0 37.0 5 32.708272143957 35.0 35.0 37.0 28.0 37.0 6 33.91651064200355 35.0 35.0 37.0 28.0 37.0 7 15.41309261333724 0.0 0.0 35.0 0.0 37.0 8 24.94874144503248 17.0 17.0 35.0 17.0 37.0 9 32.611071087871245 32.0 32.0 37.0 27.0 39.0 10 35.338891505793036 37.0 34.0 37.0 32.0 39.0 11 36.315804473718586 37.0 35.0 39.0 32.0 39.0 12 36.30825393558194 37.0 35.0 39.0 32.0 39.0 13 36.14349782884919 37.0 35.0 39.0 32.0 39.0 14 37.15962609497647 39.0 36.0 40.0 32.0 41.0 15 37.42094992301024 39.0 36.0 41.0 32.0 41.0 16 37.41692033044242 39.0 36.0 41.0 32.0 41.0 17 37.35269820410005 39.0 36.0 41.0 32.0 41.0 18 37.29092233336368 39.0 36.0 40.0 32.0 41.0 19 37.25476287549826 39.0 36.0 40.0 32.0 41.0 20 37.369459805012056 39.0 35.0 40.0 32.0 41.0 21 37.25251255784128 39.0 35.0 40.0 32.0 41.0 22 37.29875787215346 39.0 35.0 40.0 32.0 41.0 23 37.27212614445575 39.0 35.0 40.0 32.0 41.0 24 37.084726339997864 39.0 35.0 40.0 32.0 41.0 25 36.82448907695414 39.0 35.0 40.0 31.0 41.0 26 36.70243556808151 38.0 35.0 40.0 31.0 41.0 27 36.621889237662835 38.0 35.0 40.0 31.0 41.0 28 36.49252071202663 38.0 35.0 40.0 30.0 41.0 29 36.44000142500327 38.0 35.0 40.0 30.0 41.0 30 36.130197798369956 38.0 35.0 40.0 30.0 41.0 31 36.02241609303688 38.0 35.0 40.0 30.0 41.0 32 35.94573310480503 38.0 35.0 40.0 29.0 41.0 33 35.760154137853235 38.0 34.0 40.0 29.0 41.0 34 35.546461043973224 38.0 34.0 40.0 27.0 41.0 35 35.36620208921312 38.0 34.0 40.0 26.0 41.0 36 35.147683775941985 38.0 34.0 40.0 25.0 41.0 37 35.023162240580135 38.0 34.0 40.0 25.0 41.0 38 34.87563679833433 38.0 34.0 40.0 24.0 41.0 39 34.76999853541331 38.0 34.0 40.0 24.0 41.0 40 34.60552940850489 38.0 33.0 40.0 23.0 41.0 41 34.41978814951451 38.0 33.0 40.0 23.0 41.0 42 34.38061243473683 37.0 33.0 40.0 23.0 41.0 43 34.29449473738377 37.0 33.0 40.0 23.0 41.0 44 34.051941369032306 37.0 33.0 40.0 22.0 41.0 45 34.00683803650384 37.0 33.0 40.0 23.0 41.0 46 33.96099449394571 37.0 33.0 40.0 23.0 41.0 47 33.87327366791882 37.0 33.0 40.0 22.0 41.0 48 33.79200098166891 36.0 33.0 40.0 22.0 41.0 49 33.640833864410936 36.0 32.0 40.0 22.0 41.0 50 33.515722536030815 36.0 32.0 40.0 21.0 41.0 51 33.35716915184597 36.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 3.0 14 12.0 15 25.0 16 75.0 17 186.0 18 400.0 19 683.0 20 1161.0 21 1960.0 22 2807.0 23 4078.0 24 5875.0 25 7699.0 26 9110.0 27 10246.0 28 11036.0 29 12660.0 30 15110.0 31 19429.0 32 25107.0 33 35311.0 34 44533.0 35 50795.0 36 63198.0 37 91047.0 38 75999.0 39 16716.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.73635856248837 23.985575800277875 27.518990147685756 14.759075489547996 2 34.390078810597274 23.404491135292186 29.673120084233528 12.532309969877014 3 31.567384841923595 22.723854158832445 32.79170014764617 12.917060851597784 4 28.204970886391617 26.843499016351913 29.404150717845397 15.547379379411078 5 21.248382027542146 35.854863417395336 28.613471822539594 14.283282732522927 6 19.7562848581528 42.09519021814425 28.11986652469412 10.028658399008831 7 38.09211854443833 56.35650415032201 4.678760722159988 0.8726165830796696 8 86.82327188666474 3.234163661625058 8.00594543029161 1.9366190214185908 9 81.64694752425474 5.079938724859578 9.833314201345045 3.439799549540634 10 43.95145488875079 25.822840427342648 16.817611457026256 13.408093226880311 11 36.75301130898425 23.812002485839027 23.051209075687463 16.383777129489253 12 33.48163922875656 21.70161223286137 28.688086576865075 16.128661961516997 13 24.173003313132593 29.780193246276188 28.637023959846573 17.409779480744643 14 19.297117139226778 33.21821154173478 30.116850267781864 17.367821051256577 15 17.626300810272692 24.242868056572632 40.07920643151474 18.05162470163994 16 20.44483851942161 19.213398197370868 38.967308050080945 21.374455233126575 17 19.98111870673037 20.125004453135205 30.241340136404478 29.652536703729947 18 22.447957693236383 23.869794284945236 32.92846087772284 20.75378714409554 19 27.688209285479616 24.97793224109472 26.366122922365033 20.96773555106064 20 28.350439969758263 24.277701469732534 25.828975858069676 21.542882702439524 21 24.518368687928245 25.832340449113527 29.222462801477256 20.426828061480975 22 23.447439150381385 23.073771627393313 27.613990365394585 25.864798856830713 23 22.014915034180287 27.280697934932768 27.014895242468263 23.68949178841868 24 21.329132212594654 25.358131029050273 33.86540052487621 19.447336233478868 25 22.720489567788594 24.231190946479252 31.097331681385104 21.95098780434705 26 19.87305595908657 28.39378381908792 27.75668860907806 23.976471612747446 27 20.26948395090072 27.55619856628838 30.082808523102866 22.091508959708033 28 19.37984649548155 26.78926972540979 33.550118552355016 20.280765226753644 29 19.898389350475597 25.681131769260308 32.72143956996568 21.69903931029842 30 22.076863092811255 26.181070414953034 31.294457133130933 20.44760935910478 31 27.777469906701867 24.90391123812992 26.60184221255507 20.716776642613137 32 27.30345840375884 25.391381105248367 26.9388950683012 20.366265422691594 33 26.58046716357058 24.676702384109632 26.545237916170223 22.197592536149564 34 21.349715593098235 26.42668556115441 28.804066009317935 23.419532836429415 35 22.093290213790073 24.99297394223195 29.55159897241431 23.362136871563663 36 27.79369911056046 25.78088199785458 25.705277657927965 20.720141233656992 37 21.77464365022503 30.34247578484034 26.688134076973924 21.194746487960703 38 22.944729665005482 30.05292303794863 25.173870190119185 21.8284771069267 39 21.98641496886764 27.56827151062221 25.652037952586976 24.793275567923175 40 23.86108593165526 24.78041095510844 27.907303537570606 23.451199575665694 41 21.018996085199362 24.105513575135276 27.966084922277943 26.909405417387415 42 22.320301150690135 26.571956727400835 25.440464551064597 25.667277570844433 43 22.289623997054996 25.743475662131726 26.62856102378568 25.338339317027604 44 21.899727270208327 26.708915374597737 28.81752437349336 22.573832981700583 45 20.952100098562727 29.86668302781527 26.069049324904704 23.1121675487173 46 22.825781475749217 27.874053461372515 27.81507415954495 21.48509090333332 47 22.4932807137683 27.619532044760938 27.448729570005266 22.438457671465496 48 22.087154783063045 26.571758810280606 28.732420011795863 22.60866639486049 49 22.22074883921609 26.399966749923802 29.581088623328096 21.798195787532013 50 20.579620078296013 27.828532523720366 29.141514699304523 22.4503326986791 51 20.93369380638164 29.046118647355236 27.396479450265403 22.62370809599772 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 278.0 1 539.0 2 800.0 3 3621.5 4 6443.0 5 4577.0 6 2711.0 7 2710.5 8 2710.0 9 2715.5 10 2721.0 11 2655.0 12 2589.0 13 2550.0 14 2511.0 15 2346.5 16 2182.0 17 2127.0 18 2072.0 19 2072.0 20 2072.0 21 2138.5 22 2205.0 23 2446.5 24 2688.0 25 2902.5 26 3889.0 27 4661.0 28 5565.5 29 6470.0 30 7934.5 31 9399.0 32 10769.0 33 12139.0 34 12900.0 35 13661.0 36 14997.5 37 16334.0 38 19628.5 39 22923.0 40 26795.5 41 30668.0 42 32481.5 43 34295.0 44 35827.5 45 37360.0 46 38623.0 47 39886.0 48 38615.5 49 37345.0 50 35862.5 51 34380.0 52 32211.0 53 30042.0 54 28720.0 55 27398.0 56 26636.5 57 25875.0 58 24317.5 59 22760.0 60 20560.0 61 18360.0 62 16055.0 63 13750.0 64 12149.5 65 10549.0 66 9068.0 67 7587.0 68 6423.0 69 5259.0 70 4495.5 71 3732.0 72 3143.0 73 2554.0 74 1984.5 75 1034.0 76 653.0 77 510.0 78 367.0 79 278.5 80 190.0 81 132.5 82 75.0 83 56.0 84 37.0 85 28.5 86 20.0 87 17.0 88 14.0 89 9.0 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 505262.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.05574358643023 #Duplication Level Percentage of deduplicated Percentage of total 1 68.52291522158606 28.13259237132134 2 9.853306979966163 8.09069689695748 3 5.332424206707291 6.567799227739446 4 3.589025968185196 5.894005194994036 5 2.6025176622312336 5.342414890986069 6 1.94094531345611 4.781217186272251 7 1.542137719670253 4.431952755562089 8 1.212673368477704 3.982976549625059 9 0.9907280821875218 3.6607570295550005 >10 4.362636012646442 26.009261095866815 >50 0.02773574493831414 0.7959201650950651 >100 0.021997314949867293 1.6405300688840705 >500 0.0 0.0 >1k 9.564049978203171E-4 0.6698765671412696 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1710 0.3384382755877149 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1702 0.33685493862590105 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008312519049522822 0.0 2 0.0 0.0 0.0 0.04472926917124185 0.0 3 0.0 0.0 0.0 0.060562638789380556 0.0 4 0.0 0.0 0.0 0.08055226793228068 0.0 5 0.0 0.0 0.0 0.1432919950441553 0.0 6 0.0 0.0 0.0 0.22562551705847658 0.0 7 0.0 0.0 0.0 0.2778756367983343 0.0 8 0.0 0.0 0.0 0.5777200739418361 0.0 9 0.0 0.0 0.0 0.7077516219308002 0.0 10 0.0 0.0 0.0 0.9054708250373074 0.0 11 0.0 0.0 0.0 1.087158741405449 0.0 12 0.0 0.0 0.0 1.2437111835047956 0.0 13 0.0 0.0 0.0 1.3151592639066465 0.0 14 0.0 0.0 0.0 1.3517739311485921 0.0 15 0.0 0.0 0.0 1.3915552723141658 0.0 16 0.0 0.0 0.0 1.48279506473869 0.0 17 0.0 0.0 0.0 1.5837327960543244 0.0 18 0.0 0.0 0.0 1.7470144202413798 0.0 19 0.0 0.0 0.0 1.81608749520051 0.0 20 0.0 0.0 0.0 1.8905043324057618 0.0 21 0.0 0.0 0.0 1.9890670582786751 0.0 22 0.0 0.0 0.0 2.0876297841515887 0.0 23 0.0 0.0 0.0 2.197473785877426 0.0 24 0.0 0.0 0.0 2.282973981815375 0.0 25 0.0 7.916684809069354E-4 0.0 2.353432476616092 0.0 26 0.0 7.916684809069354E-4 0.0 2.420328463252728 0.0 27 0.0 7.916684809069354E-4 0.0 2.508401581753625 0.0 28 0.0 7.916684809069354E-4 0.0 2.598255954336562 0.0 29 0.0 7.916684809069354E-4 0.0 2.689693663881313 0.0 30 0.0 7.916684809069354E-4 0.0 2.8082460188971266 0.0 31 0.0 7.916684809069354E-4 0.0 2.901662899644145 0.0 32 0.0 7.916684809069354E-4 0.0 3.0035902165609127 0.0 33 0.0 7.916684809069354E-4 0.0 3.1067050361990414 0.0 34 0.0 7.916684809069354E-4 0.0 3.21160110991921 0.0 35 0.0 7.916684809069354E-4 0.0 3.3424243263890814 0.0 36 0.0 7.916684809069354E-4 0.0 3.4451433117867563 0.0 37 0.0 7.916684809069354E-4 0.0 3.553206059430553 0.0 38 0.0 7.916684809069354E-4 0.0 3.676706342452035 0.0 39 0.0 7.916684809069354E-4 0.0 3.880956810526024 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCATTA 25 3.8876908E-5 45.000004 20 ACCGGGT 20 7.0295297E-4 45.0 4 CGTTCGA 20 7.0295297E-4 45.0 14 TAGCCCG 35 1.2101191E-7 45.0 11 TGCGTAA 40 6.8012014E-9 45.0 1 CGTTTTA 805 0.0 44.16149 1 GTACGGG 85 0.0 42.35294 3 AGGCGAT 325 0.0 42.23077 7 TACGGGA 80 0.0 42.1875 4 ATTCGGC 55 6.002665E-11 40.909092 17 CCGCTCG 55 6.002665E-11 40.909092 19 CGTTTTT 1310 0.0 40.70611 1 TACGAAG 50 1.0786607E-9 40.500004 2 CGTAAAG 50 1.0786607E-9 40.500004 2 TACCTGG 315 0.0 40.0 10 CATATGC 310 0.0 39.919353 33 TATGGGC 85 0.0 39.705883 4 CGACGGT 125 0.0 39.6 28 CGGTCTA 125 0.0 39.6 31 ACGACGG 125 0.0 39.6 27 >>END_MODULE