##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545741_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 334929 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.059358849188932 31.0 31.0 33.0 30.0 33.0 2 31.2218171612491 31.0 31.0 33.0 30.0 34.0 3 31.15497015785435 31.0 31.0 34.0 28.0 34.0 4 35.10961427645859 35.0 35.0 37.0 33.0 37.0 5 32.886796903224266 35.0 35.0 37.0 28.0 37.0 6 34.04727270555849 35.0 35.0 37.0 28.0 37.0 7 15.120649451077691 0.0 0.0 35.0 0.0 37.0 8 24.822807221829105 17.0 17.0 35.0 17.0 37.0 9 32.72919633713414 32.0 32.0 37.0 27.0 39.0 10 35.619859731465475 37.0 35.0 37.0 32.0 39.0 11 36.584947854619934 37.0 35.0 39.0 33.0 39.0 12 36.273672927695124 37.0 35.0 39.0 32.0 39.0 13 35.755258577190986 37.0 35.0 39.0 31.0 39.0 14 36.79515061401073 39.0 35.0 40.0 31.0 41.0 15 37.23765932481212 39.0 35.0 41.0 32.0 41.0 16 37.357660877379985 39.0 35.0 41.0 32.0 41.0 17 37.33910172006605 39.0 35.0 41.0 32.0 41.0 18 37.242967912602374 39.0 35.0 41.0 32.0 41.0 19 37.12952297352573 39.0 35.0 40.0 32.0 41.0 20 37.20603172612703 39.0 35.0 40.0 32.0 41.0 21 37.03898736747191 39.0 35.0 40.0 32.0 41.0 22 37.092318073382714 39.0 35.0 41.0 32.0 41.0 23 37.096542849380015 39.0 35.0 40.0 32.0 41.0 24 36.89350578779383 38.0 35.0 40.0 32.0 41.0 25 36.642127137393295 38.0 35.0 40.0 31.0 41.0 26 36.50522349512882 38.0 35.0 40.0 31.0 41.0 27 36.3744495101947 38.0 35.0 40.0 31.0 41.0 28 36.32468373894169 38.0 35.0 40.0 31.0 41.0 29 36.38285726228544 38.0 35.0 40.0 31.0 41.0 30 36.172108118437045 38.0 35.0 40.0 30.0 41.0 31 35.99843548931266 38.0 35.0 40.0 30.0 41.0 32 35.83481573706666 38.0 34.0 40.0 30.0 41.0 33 35.60201117251716 38.0 34.0 40.0 29.0 41.0 34 35.41670921299738 38.0 34.0 40.0 27.0 41.0 35 35.231592367337555 38.0 34.0 40.0 27.0 41.0 36 35.040074164972275 38.0 34.0 40.0 25.0 41.0 37 34.824589689158 38.0 34.0 40.0 25.0 41.0 38 34.78822078709219 37.0 34.0 40.0 25.0 41.0 39 34.71034159478576 37.0 34.0 40.0 24.0 41.0 40 34.49538857489199 37.0 33.0 40.0 23.0 41.0 41 34.42526625045905 37.0 33.0 40.0 23.0 41.0 42 34.385893726730146 37.0 33.0 40.0 23.0 41.0 43 34.29262918409573 37.0 33.0 40.0 23.0 41.0 44 34.06145481579678 36.0 33.0 40.0 23.0 41.0 45 33.96481642377937 36.0 33.0 40.0 23.0 41.0 46 33.981055686429066 36.0 33.0 40.0 23.0 41.0 47 33.97131332312222 36.0 33.0 40.0 23.0 41.0 48 33.94957438740748 36.0 33.0 40.0 23.0 41.0 49 33.86873635904923 36.0 33.0 40.0 23.0 41.0 50 33.70714987355529 36.0 33.0 40.0 23.0 41.0 51 33.50275132938623 35.0 33.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 4.0 15 11.0 16 41.0 17 95.0 18 253.0 19 395.0 20 694.0 21 1206.0 22 1800.0 23 2724.0 24 3777.0 25 5128.0 26 6140.0 27 6667.0 28 7000.0 29 7999.0 30 9782.0 31 12721.0 32 17187.0 33 26912.0 34 34527.0 35 34298.0 36 36926.0 37 56501.0 38 52842.0 39 9296.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.785330622310997 24.88467705095707 28.895079255603427 15.43491307112851 2 32.889358640189414 24.33291832000215 30.319261694269535 12.458461345538906 3 30.21744907129571 22.775274759725196 33.73162670297287 13.275649466006229 4 27.04901635869095 26.983629366223887 30.762639245929734 15.204715029155432 5 20.69453525971176 36.82601387159667 29.165285776985574 13.314165091706004 6 20.756040832534655 40.54202532477033 28.951509125814724 9.750424716880294 7 37.07561901179056 57.55369048365474 4.703683467242311 0.6670070373123855 8 87.48391450128236 3.5201490465143355 7.550854061607088 1.445082390596216 9 83.14000877797982 4.883423053841262 9.309137160413103 2.667431007765825 10 57.512189150536386 19.35514691173353 13.681705674934092 9.450958262795996 11 53.05452797458566 17.564319602064916 18.053079906487643 11.328072516861782 12 46.597637111148934 20.103962332315206 22.13484051843824 11.163560038097627 13 21.039981608042304 44.47957626840315 22.560005254845056 11.920436868709487 14 13.59332873534391 46.466265984731095 27.11798620006031 12.822419079864689 15 12.655219464423803 21.381247965986823 53.22023473631725 12.743297833272127 16 13.683795670127102 15.100812410988599 52.33168820854569 18.883703710338608 17 14.34542843408603 16.190297048031074 29.519689247571872 39.94458527031102 18 20.96593606406134 21.936589545844047 35.968817271720276 21.128657118374342 19 30.161914913309985 22.882163085310616 26.273329571341986 20.68259243003741 20 32.59198218129812 20.90502763272216 24.99843250360524 21.50455768237447 21 21.466340627416557 27.336241412359037 29.65106037398971 21.546357586234695 22 22.79289043349486 23.379880511989107 25.242961941187538 28.584267113328497 23 19.65491193655969 29.63852040283165 24.528183585177754 26.17838407543091 24 19.473082354767726 22.103192019801213 41.94053067963658 16.483194945794484 25 17.035849388974977 22.967554317482215 38.74821230768312 21.24838398585969 26 15.925763370744248 34.24606409119545 28.244792179835127 21.583380358225178 27 17.306951622582698 34.23591268597225 29.58627052300637 18.870865168438684 28 14.477098131245727 28.38721042370174 41.14304822813193 15.992643216920602 29 14.03521343329482 24.326946905164977 40.242558870686025 21.395280790854184 30 18.138471138659238 29.554024882885628 33.080443914979 19.227060063476138 31 30.769207802250627 25.608113958480754 24.832427171131794 18.79025106813683 32 31.469953333393047 24.976935410191416 27.313251465235915 16.239859791179622 33 29.204099973427205 25.459425729035107 25.364480233124038 19.97199406441365 34 19.42172818716803 27.751254743542663 28.581579976651767 24.245437092637545 35 20.296540460814082 24.913936983659223 31.937515115143807 22.852007440382888 36 33.62921693851533 22.695556371648916 24.862284245317664 18.81294244451809 37 20.55241558658701 33.08551961759059 28.123871029382347 18.23819376644005 38 21.363632292217154 33.38558321315861 23.162819582657818 22.087964911966417 39 21.731471446187104 30.82384624801077 26.252429619411878 21.19225268639025 40 24.471455144224596 25.107410824383674 25.55765550310663 24.8634785282851 41 17.365770058728867 23.752198227086936 27.730354791612548 31.151676922571646 42 23.329123485873126 24.99395394247736 23.828333766260908 27.8485888053886 43 22.750194817409064 25.791734964723865 25.044710968593343 26.413359249273725 44 19.94004699503477 30.19296627046329 28.35705477877401 21.509931955727932 45 16.933439624517437 38.47024294701265 22.275467337853694 22.320850090616222 46 22.048255003299207 32.52898375476593 26.56085319575194 18.861908046182922 47 23.798476692075038 26.951085155361287 26.093888555484895 23.156549597078786 48 23.990756249832053 23.030552744014404 30.42734430282239 22.551346703331156 49 21.675340146717662 23.547080127429993 32.82665878439908 21.950920941453266 50 20.01857110014361 33.810150808081715 25.766953593149594 20.40432449862508 51 19.540559342427798 34.12096295035664 23.5918657387088 22.74661196850676 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 247.0 1 319.0 2 391.0 3 1897.5 4 3404.0 5 2608.0 6 1812.0 7 1884.5 8 1957.0 9 2077.0 10 2197.0 11 2183.5 12 2170.0 13 2067.0 14 1964.0 15 1822.5 16 1681.0 17 1570.5 18 1460.0 19 1437.5 20 1415.0 21 1399.0 22 1383.0 23 1372.0 24 1361.0 25 1726.0 26 2294.5 27 2498.0 28 3096.0 29 3694.0 30 4291.0 31 4888.0 32 5549.0 33 6210.0 34 6388.5 35 6567.0 36 7802.5 37 9038.0 38 13283.5 39 17529.0 40 23658.5 41 29788.0 42 32608.5 43 35429.0 44 34071.5 45 32714.0 46 31289.5 47 29865.0 48 27966.0 49 26067.0 50 24349.0 51 22631.0 52 20176.5 53 17722.0 54 16022.0 55 14322.0 56 13174.0 57 12026.0 58 11384.5 59 10743.0 60 9870.5 61 8998.0 62 7706.0 63 6414.0 64 5511.0 65 4608.0 66 3948.5 67 3289.0 68 2853.5 69 2418.0 70 1985.5 71 1553.0 72 1318.5 73 1084.0 74 838.0 75 462.0 76 332.0 77 248.0 78 164.0 79 134.0 80 104.0 81 82.5 82 61.0 83 45.5 84 30.0 85 20.5 86 11.0 87 6.0 88 1.0 89 3.0 90 5.0 91 3.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 334929.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.802522325627223 #Duplication Level Percentage of deduplicated Percentage of total 1 69.09234150184517 19.900337086367557 2 7.1422647924700415 4.114304822813193 3 3.909068292076129 3.3777308026477257 4 2.729402496164531 3.144547053256063 5 2.054567317659742 2.958836051819938 6 1.6658373761247254 2.8788190930018005 7 1.2822905004768421 2.585324053754676 8 1.1568603060082099 2.6656395833146727 9 0.9837459053779491 2.5500927062153473 >10 9.844715346021479 51.96504333754318 >50 0.11402744951693826 2.1344822335480056 >100 0.02176887672596094 0.8730208491949041 >500 0.003109839532280134 0.8518223265229348 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1000 0.2985707418587223 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 997 0.2976750296331461 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 856 0.25557655503106624 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007165697804609335 0.0 2 0.0 0.0 0.0 0.032245640120742006 0.0 3 0.0 0.0 0.0 0.03941133792535134 0.0 4 0.0 0.0 0.0 0.059714148371744456 0.0 5 0.0 0.0 0.0 0.10778403781099875 0.0 6 0.0 0.0 0.0 0.15256964908980708 0.0 7 0.0 0.0 0.0 0.1797395865989508 0.0 8 0.0 0.0 0.0 0.3669434417443697 0.0 9 0.0 0.0 0.0 0.46815892323447655 0.0 10 0.0 0.0 0.0 0.6434199487055465 0.0 11 0.0 0.0 0.0 0.7944967440860601 0.0 12 0.0 0.0 0.0 0.9324364268247898 0.0 13 0.0 0.0 0.0 0.9888662970360882 0.0 14 0.0 0.0 0.0 1.0094676782243401 0.0 15 0.0 0.0 0.0 1.046191879472963 0.0 16 0.0 0.0 0.0 1.1172517160353388 0.0 17 0.0 0.0 0.0 1.2080172215603904 0.0 18 0.0 0.0 0.0 1.3489426117177072 0.0 19 0.0 0.0 0.0 1.3985053548662552 0.0 20 0.0 0.0 0.0 1.4573237910124235 0.0 21 0.0 0.0 0.0 1.5361464668631262 0.0 22 0.0 0.0 0.0 1.6072063034255022 0.0 23 0.0 0.0 0.0 1.6884175452110746 0.0 24 0.0 0.0 0.0 1.7499231180339714 0.0 25 0.0 0.0 0.0 1.7908273096686163 0.0 26 0.0 0.0 0.0 1.842778618752034 0.0 27 0.0 0.0 0.0 1.894431357093593 0.0 28 0.0 0.0 0.0 1.9457855246932931 0.0 29 0.0 0.0 0.0 1.997736833776711 0.0 30 0.0 0.0 0.0 2.0744695144344023 0.0 31 0.0 0.0 0.0 2.148813629157224 0.0 32 0.0 0.0 0.0 2.216887758301013 0.0 33 0.0 0.0 0.0 2.2795876140913447 0.0 34 0.0 0.0 0.0 2.3401974746886656 0.0 35 0.0 0.0 0.0 2.4375315365346086 0.0 36 0.0 0.0 0.0 2.5020228167760927 0.0 37 0.0 0.0 0.0 2.5733812240803275 0.0 38 0.0 0.0 0.0 2.640261070256681 0.0 39 0.0 0.0 0.0 2.7152023264632206 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTAGCAT 75 0.0 45.000004 29 CGGGTAT 25 3.8848662E-5 45.0 6 ATAGGCG 20 7.026121E-4 45.0 5 CGACGCT 20 7.026121E-4 45.0 12 TTTCGGC 20 7.026121E-4 45.0 41 ATTCGGC 20 7.026121E-4 45.0 17 GAATAAC 35 1.208482E-7 45.0 9 GCTCTAC 20 7.026121E-4 45.0 22 TCTACTC 25 3.8848662E-5 45.0 42 CGCTCAT 20 7.026121E-4 45.0 24 AGTGATA 20 7.026121E-4 45.0 1 TGATTCG 20 7.026121E-4 45.0 15 TTGCGTA 20 7.026121E-4 45.0 1 GTACTAA 20 7.026121E-4 45.0 1 TGTTACA 20 7.026121E-4 45.0 32 TCCAATA 20 7.026121E-4 45.0 37 CCGACGC 20 7.026121E-4 45.0 11 ATGGTCG 20 7.026121E-4 45.0 44 TGGATAG 35 1.208482E-7 45.0 1 ACCGTAT 25 3.8848662E-5 45.0 6 >>END_MODULE