SRR1545737_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545737_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	268067
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1001	0.37341410915927736	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	778	0.29022595097494286	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	649	0.24210365319117982	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCACGAC	40	6.7811925E-9	45.000004	25
TTGATAA	40	6.7811925E-9	45.000004	1
CGGAATT	20	7.0235983E-4	45.000004	17
AGGTACT	20	7.0235983E-4	45.000004	7
TCCATAT	20	7.0235983E-4	45.000004	41
CGCGGTG	20	7.0235983E-4	45.000004	23
GTTTCGA	20	7.0235983E-4	45.000004	25
CGACGGT	40	6.7811925E-9	45.000004	28
GCGAATC	20	7.0235983E-4	45.000004	27
GAGTATA	20	7.0235983E-4	45.000004	1
GAGTACG	20	7.0235983E-4	45.000004	1
GGGTACC	20	7.0235983E-4	45.000004	7
GCGTTGG	20	7.0235983E-4	45.000004	2
CTGGTAA	20	7.0235983E-4	45.000004	1
GTTACGG	20	7.0235983E-4	45.000004	2
CTACGGG	20	7.0235983E-4	45.000004	3
CGAGGCA	20	7.0235983E-4	45.000004	5
AACGCGG	20	7.0235983E-4	45.000004	2
TCGTCCG	20	7.0235983E-4	45.000004	34
CTCATGT	20	7.0235983E-4	45.000004	21