##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545736_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 833149 Sequences flagged as poor quality 0 Sequence length 50 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.536398651381685 31.0 31.0 33.0 30.0 34.0 2 31.731906297673046 31.0 31.0 34.0 30.0 34.0 3 31.719629982152053 31.0 31.0 34.0 30.0 34.0 4 35.6386948793073 37.0 35.0 37.0 33.0 37.0 5 27.00608654634405 35.0 22.0 37.0 0.0 37.0 6 31.292414682127685 35.0 26.0 37.0 17.0 37.0 7 15.072474431344213 0.0 0.0 32.0 0.0 37.0 8 25.142580738859436 17.0 17.0 35.0 17.0 37.0 9 33.2673915470102 32.0 32.0 37.0 28.0 39.0 10 36.15031524973324 37.0 35.0 39.0 32.0 39.0 11 37.10594623530725 39.0 37.0 39.0 34.0 39.0 12 36.90568673790642 39.0 35.0 39.0 33.0 39.0 13 36.279579042884286 39.0 35.0 39.0 32.0 39.0 14 37.576386696737316 40.0 35.0 41.0 33.0 41.0 15 37.90252643884828 40.0 35.0 41.0 33.0 41.0 16 38.00968734284024 40.0 35.0 41.0 33.0 41.0 17 38.05100648263396 40.0 35.0 41.0 34.0 41.0 18 38.020450123567336 40.0 36.0 41.0 34.0 41.0 19 37.92870182884454 40.0 36.0 41.0 34.0 41.0 20 37.886744147805494 40.0 35.0 41.0 34.0 41.0 21 37.72809425444908 40.0 35.0 41.0 33.0 41.0 22 37.60251887717563 39.0 35.0 41.0 33.0 41.0 23 37.48865809116977 39.0 35.0 41.0 33.0 41.0 24 37.3171305492775 39.0 35.0 41.0 33.0 41.0 25 37.135105485333355 38.0 35.0 41.0 33.0 41.0 26 36.880615592168986 38.0 35.0 40.0 33.0 41.0 27 36.65405347662903 38.0 35.0 40.0 32.0 41.0 28 36.69254599117325 38.0 35.0 40.0 32.0 41.0 29 36.68934128229164 38.0 35.0 40.0 32.0 41.0 30 36.44706889163883 38.0 35.0 40.0 32.0 41.0 31 36.145819055175004 38.0 35.0 40.0 31.0 41.0 32 35.74427503363744 38.0 35.0 40.0 30.0 41.0 33 35.4326561035301 38.0 34.0 40.0 29.0 41.0 34 35.1069364543437 38.0 34.0 40.0 27.0 41.0 35 34.871309933757345 38.0 34.0 40.0 24.0 41.0 36 34.65297323768017 38.0 34.0 40.0 23.0 41.0 37 34.46448834482187 37.0 34.0 40.0 23.0 41.0 38 34.32618295166891 37.0 33.0 40.0 23.0 41.0 39 34.31724457449988 37.0 34.0 40.0 23.0 41.0 40 34.0661646356174 37.0 33.0 40.0 23.0 40.0 41 33.90837773315457 37.0 33.0 40.0 22.0 40.0 42 33.90333781832541 37.0 33.0 40.0 21.0 40.0 43 33.76178210620189 36.0 33.0 40.0 21.0 41.0 44 33.52568388127454 36.0 33.0 40.0 20.0 40.0 45 33.32292903190186 36.0 33.0 39.0 20.0 40.0 46 33.3255300072376 36.0 33.0 39.0 20.0 40.0 47 33.19251538440303 35.0 33.0 39.0 20.0 40.0 48 33.16781992176669 35.0 33.0 39.0 20.0 40.0 49 33.05562270374207 35.0 33.0 39.0 18.0 40.0 50 33.0739027472877 35.0 33.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 4.0 14 5.0 15 22.0 16 36.0 17 138.0 18 357.0 19 743.0 20 1421.0 21 2513.0 22 3993.0 23 6428.0 24 9982.0 25 14757.0 26 18539.0 27 18881.0 28 17626.0 29 18292.0 30 21250.0 31 28212.0 32 39707.0 33 78435.0 34 73123.0 35 85149.0 36 98993.0 37 188176.0 38 87260.0 39 19103.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.76700566165236 22.65045027960185 27.597824638810103 18.98471941993569 2 34.556123814587785 23.567093040980666 29.628913915758165 12.247869228673384 3 27.760100534238173 22.615162473939236 36.82150491688761 12.803232074934975 4 25.84003581592248 25.358729350932425 34.99914181016841 13.802093022976683 5 16.441836934329874 47.870068859231665 25.292114615753004 10.39597959068546 6 19.176161766982858 38.99434554923549 31.865008539889022 9.96448414389263 7 37.70418016465242 55.645868866193204 5.739429561819074 0.9105214073353025 8 84.43555714524052 3.0251491629948544 11.086612358653735 1.452681333110884 9 81.31258634409932 4.25410100714278 12.14056549308707 2.2927471556708343 10 54.74963061829277 19.64678586903423 16.59499081196761 9.008592700705396 11 50.2167079357954 17.000800577087652 22.036634503552186 10.745856983564765 12 44.355211372755655 19.33051591011932 25.2550264118423 11.059246305282729 13 21.25490158423043 42.07614724377032 25.145322145258532 11.523629026740716 14 13.319466265938026 44.08887245858784 29.919138113350673 12.672523162123461 15 11.825375773121015 21.57321199449318 53.895881769047314 12.70553046333849 16 13.093576299077355 14.683207925593141 52.85249097100279 19.370724804326716 17 14.435833206305235 15.448017101382828 33.438436582171974 36.67771311013996 18 19.94949282781351 20.90094328865545 38.07170146036303 21.077862423168003 19 28.523589417979256 22.402595454114447 29.00897678566499 20.064838342241302 20 30.635096483342117 21.113870388129854 28.018757749214124 20.232275379313904 21 20.526220399952468 27.187093785145272 31.25635390548389 21.03033190941836 22 21.26282333652204 23.84783514113322 28.246208061223143 26.6431334611216 23 17.741484416352897 29.709211677623088 27.91289433222629 24.636409573797724 24 18.433557502919644 22.141657734690913 43.82169335857092 15.603091403818524 25 16.007340823790223 23.237860214679486 40.46683126307539 20.2879676984549 26 14.704692678020379 33.74354407194872 31.222146338770134 20.32961691126077 27 16.137569630402247 32.543638652870015 33.18241995129323 18.136371765434514 28 13.514029303281886 26.925675959522245 43.50434316070715 16.05595157648872 29 13.382240151521515 23.600460421845312 42.35376865362618 20.66353077300699 30 17.686992362710633 29.234626699425913 34.99061992512743 18.087761012736017 31 29.691087668592292 24.834453381087897 27.180732378002016 18.293726572317798 32 30.487703880098277 24.63628954724785 28.770243977967922 16.10576259468594 33 28.06592818331415 25.31395944782986 27.07006789901926 19.550044469836728 34 18.41711386558707 25.768980098397765 31.46676044741097 24.3471455886042 35 19.878197057189052 24.30357595100036 32.884033948309366 22.93419304350122 36 30.53271383630059 23.80678606107671 27.08135039470731 18.57914970791539 37 20.416276080268954 32.788132734960975 28.498263815956086 18.29732736881398 38 20.00914602310031 33.89225696724115 24.585998422851134 21.512598586807403 39 20.186665290362228 31.76958743274012 27.013175314379538 21.03057196251811 40 23.198491506321197 25.78962466497589 26.26456972282269 24.74731410588022 41 16.825921893922935 23.84075357469072 27.815432773729547 31.517891757656795 42 21.254301451481066 25.469753909564798 24.03987762092975 29.236067018024386 43 21.65783071215353 25.755417098262136 26.254487492633373 26.332264696950965 44 19.03993163287719 30.27117598412769 28.763282438075304 21.925609944919817 45 16.537378068028648 37.88421998946167 23.44094513706432 22.137456805445368 46 21.329558098251333 32.34955572172565 27.1759313160071 19.14495486401592 47 21.918768431577064 27.523408177888946 27.475877664139308 23.08194572639468 48 23.04089664633817 23.398575764959208 31.45619811102216 22.104329477680462 49 20.395871566790575 23.289951737324298 33.340975023675234 22.973201672209893 50 18.398629776906652 32.46190057240661 27.958384394628094 21.18108525605864 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 490.0 1 793.5 2 1097.0 3 7299.5 4 13502.0 5 10166.0 6 6830.0 7 7263.0 8 7696.0 9 8261.0 10 8826.0 11 8983.0 12 9140.0 13 8604.5 14 8069.0 15 7554.0 16 7039.0 17 6375.0 18 5711.0 19 5235.5 20 4760.0 21 4459.5 22 4159.0 23 4284.5 24 4410.0 25 4803.0 26 5196.0 27 6475.5 28 7755.0 29 9133.0 30 10511.0 31 11480.5 32 12450.0 33 14187.0 34 15924.0 35 16776.5 36 17629.0 37 23688.0 38 29747.0 39 42461.5 40 55176.0 41 67595.0 42 80014.0 43 82997.0 44 85980.0 45 83958.5 46 81937.0 47 76025.5 48 70114.0 49 66658.0 50 63202.0 51 57201.0 52 51200.0 53 44482.0 54 37764.0 55 34152.5 56 30541.0 57 28320.5 58 26100.0 59 23367.0 60 20634.0 61 18356.0 62 16078.0 63 13444.5 64 10811.0 65 8947.0 66 7083.0 67 6273.0 68 5463.0 69 4786.5 70 4110.0 71 3581.0 72 3052.0 73 2333.0 74 1614.0 75 1167.0 76 720.0 77 545.5 78 371.0 79 247.5 80 124.0 81 83.5 82 43.0 83 47.5 84 52.0 85 34.5 86 17.0 87 11.0 88 5.0 89 3.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 833149.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.701001256306952 #Duplication Level Percentage of deduplicated Percentage of total 1 75.8391519960797 18.733029887324186 2 6.110309008778312 3.0186150100451354 3 2.591281428711192 1.9202173747812006 4 1.6846891046114163 1.6645403075797292 5 1.2388668327178096 1.5300625595679815 6 1.0246415242269957 1.5185802946317173 7 0.7904273063465911 1.3667042120960526 8 0.7178228376193231 1.4184754251072575 9 0.6634059089739655 1.4748111171906637 >10 8.13098194143518 44.74890150803981 >50 1.1085608509508784 17.900571921401582 >100 0.09784386036587149 3.355422889388938 >500 0.0 0.0 >1k 0.002017399182801474 1.350067492845768 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4633 0.55608300556083 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2369 0.2843428966487387 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1931 0.23177126780443832 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1904 0.22853055095787186 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011282495688046196 0.0 2 0.0 0.0 0.0 0.033967513614011416 0.0 3 0.0 0.0 0.0 0.045129982752184786 0.0 4 0.0 0.0 0.0 0.06529444313082054 0.0 5 0.0 0.0 0.0 0.11714591267588391 0.0 6 0.0 0.0 0.0 0.19228253289627667 0.0 7 0.0 0.0 0.0 0.2440139758914672 0.0 8 0.0 0.0 0.0 0.5716864570442982 0.0 9 0.0 0.0 0.0 0.7182388744390259 0.0 10 0.0 0.0 0.0 1.003782036586493 0.0 11 0.0 0.0 0.0 1.1811812772985384 0.0 12 0.0 0.0 0.0 1.3930281378240867 0.0 13 0.0 0.0 0.0 1.4650440677477858 0.0 14 0.0 0.0 0.0 1.4859286874256585 0.0 15 0.0 0.0 0.0 1.528538112630514 0.0 16 0.0 0.0 0.0 1.6178378657359007 0.0 17 0.0 0.0 0.0 1.7249015482224668 0.0 18 0.0 0.0 0.0 1.8990600720879458 0.0 19 0.0 0.0 0.0 1.966875072766096 0.0 20 0.0 0.0 0.0 2.050773631127205 0.0 21 0.0 0.0 0.0 2.145234525877124 0.0 22 0.0 0.0 0.0 2.2364547037804763 0.0 23 0.0 0.0 0.0 2.343638412816915 0.0 24 0.0 0.0 0.0 2.4276569977278974 0.0 25 0.0 0.0 0.0 2.4862299540658395 0.0 26 0.0 0.0 0.0 2.5500840785981858 0.0 27 0.0 0.0 0.0 2.6126179110819314 0.0 28 0.0 0.0 0.0 2.678512486962116 0.0 29 0.0 0.0 0.0 2.76133080637437 0.0 30 0.0 0.0 0.0 2.8637134534158957 0.0 31 0.0 0.0 0.0 2.9581743481658145 0.0 32 0.0 0.0 0.0 3.041232720677814 0.0 33 0.0 0.0 0.0 3.1272917569366343 0.0 34 0.0 0.0 0.0 3.2235530499346456 0.0 35 0.0 0.0 0.0 3.339498697111801 0.0 36 0.0 0.0 0.0 3.4363601228591762 0.0 37 0.0 0.0 0.0 3.5355020530541355 0.0 38 0.0 0.0 0.0 3.628042523006089 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTT 25 4.4417826E-5 44.0 24 CATGCGC 20 7.855234E-4 44.0 35 CGACGCA 20 7.855234E-4 44.0 17 TCATTAC 20 7.855234E-4 44.0 37 CGATTAC 35 1.4454417E-7 44.0 10 TAGCCGT 20 7.855234E-4 44.0 44 CATTACC 20 7.855234E-4 44.0 38 ATCCGGC 30 2.5268746E-6 44.0 16 TGGCACG 25 4.4417826E-5 44.0 32 AATGCGC 30 2.5268746E-6 44.0 34 CTACGTT 20 7.855234E-4 44.0 41 ATATACG 25 4.4417826E-5 44.0 1 GTAGACC 25 4.4417826E-5 44.0 16 TACGAAC 20 7.855234E-4 44.0 12 CGCTACG 20 7.855234E-4 44.0 33 CGCTAAG 20 7.855234E-4 44.0 2 GTGTCGT 20 7.855234E-4 44.0 27 ACGTGAC 25 4.4417826E-5 44.0 25 GTCCGTT 25 4.4417826E-5 44.0 9 ATAAGTC 20 7.855234E-4 44.0 44 >>END_MODULE