SRR1545735_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545735_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	320071
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1276	0.3986615469692662	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1109	0.3464856235022854	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	956	0.2986837295475066	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAGGC	25	3.8844788E-5	45.0	4
GTGCACT	20	7.0256507E-4	45.0	39
CTCACGA	80	0.0	45.0	24
CATATAG	20	7.0256507E-4	45.0	2
AGTTTCG	20	7.0256507E-4	45.0	31
CTCAACT	20	7.0256507E-4	45.0	23
ATAGGCC	35	1.2082637E-7	45.0	5
ACGTTAG	25	3.8844788E-5	45.0	2
TATGGGT	20	7.0256507E-4	45.0	4
CCGTGAG	20	7.0256507E-4	45.0	24
TGTATGA	20	7.0256507E-4	45.0	1
GTGATAC	25	3.8844788E-5	45.0	9
AAGGTAC	20	7.0256507E-4	45.0	6
CGATTCT	35	1.2082637E-7	45.0	10
AGGAACG	20	7.0256507E-4	45.0	7
GGATAGT	25	3.8844788E-5	45.0	8
GTCAGAC	20	7.0256507E-4	45.0	44
GCCGATG	20	7.0256507E-4	45.0	9
TACTGAC	45	3.8380676E-10	45.0	20
GTGTATG	20	7.0256507E-4	45.0	1