##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545735_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 320071 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.006011166272483 31.0 31.0 33.0 30.0 33.0 2 31.15727135541802 31.0 31.0 33.0 30.0 34.0 3 31.04050351328299 31.0 31.0 34.0 28.0 34.0 4 35.00849811448085 35.0 35.0 37.0 32.0 37.0 5 32.78455717637649 35.0 35.0 37.0 28.0 37.0 6 33.98096672300833 35.0 35.0 37.0 28.0 37.0 7 15.722177266918901 0.0 0.0 35.0 0.0 37.0 8 25.11658038372736 17.0 17.0 35.0 17.0 37.0 9 32.80580246257862 32.0 32.0 37.0 27.0 39.0 10 35.60031368040216 37.0 35.0 37.0 32.0 39.0 11 36.529151344545426 37.0 35.0 39.0 32.0 39.0 12 36.194566205623126 37.0 35.0 39.0 32.0 39.0 13 35.67975230495734 37.0 35.0 39.0 31.0 39.0 14 36.69422409402914 39.0 35.0 40.0 31.0 41.0 15 37.13649471523506 39.0 35.0 41.0 32.0 41.0 16 37.2809657857163 39.0 35.0 41.0 32.0 41.0 17 37.23982178954044 39.0 35.0 41.0 32.0 41.0 18 37.14706424512061 39.0 35.0 40.0 32.0 41.0 19 37.01921448678574 38.0 35.0 40.0 32.0 41.0 20 37.035254677868345 39.0 35.0 40.0 32.0 41.0 21 36.8714941372383 38.0 35.0 40.0 32.0 41.0 22 36.88965260832753 38.0 35.0 40.0 32.0 41.0 23 36.88500676412421 38.0 35.0 40.0 32.0 41.0 24 36.699160498764336 38.0 35.0 40.0 32.0 41.0 25 36.44586982263311 38.0 35.0 40.0 31.0 41.0 26 36.31273373720206 38.0 35.0 40.0 31.0 41.0 27 36.18092235785185 38.0 35.0 40.0 31.0 41.0 28 36.12068572285524 38.0 35.0 40.0 31.0 41.0 29 36.1630575716013 38.0 35.0 40.0 31.0 41.0 30 35.87779898834946 38.0 34.0 40.0 30.0 41.0 31 35.666336531582054 38.0 34.0 40.0 30.0 41.0 32 35.39504672400811 38.0 34.0 40.0 29.0 41.0 33 35.073236875568234 38.0 34.0 40.0 26.0 41.0 34 34.81951192079257 38.0 34.0 40.0 24.0 41.0 35 34.590275282671655 37.0 34.0 40.0 23.0 41.0 36 34.34225531210263 37.0 33.0 40.0 22.0 41.0 37 34.175873478072056 37.0 33.0 40.0 22.0 41.0 38 34.13065226152947 37.0 33.0 40.0 22.0 41.0 39 34.07670485611005 37.0 33.0 40.0 22.0 41.0 40 33.90091261001465 37.0 33.0 40.0 21.0 41.0 41 33.76776402735643 37.0 33.0 40.0 20.0 41.0 42 33.71721274342255 36.0 33.0 40.0 19.0 41.0 43 33.61084884291298 36.0 33.0 40.0 18.0 41.0 44 33.38623305454102 36.0 33.0 40.0 18.0 41.0 45 33.3097375269862 36.0 33.0 40.0 18.0 41.0 46 33.32141306147698 36.0 32.0 40.0 18.0 41.0 47 33.28956700232136 36.0 32.0 40.0 18.0 41.0 48 33.292278900618925 36.0 32.0 40.0 18.0 41.0 49 33.20865058065242 36.0 32.0 40.0 18.0 41.0 50 33.052650818099735 35.0 32.0 40.0 18.0 41.0 51 32.8740185771282 35.0 32.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 3.0 15 13.0 16 32.0 17 112.0 18 283.0 19 523.0 20 902.0 21 1480.0 22 2217.0 23 3287.0 24 4741.0 25 6279.0 26 7445.0 27 7385.0 28 7411.0 29 7918.0 30 9612.0 31 12261.0 32 16688.0 33 25891.0 34 32458.0 35 31458.0 36 33799.0 37 50989.0 38 48018.0 39 8864.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.51697904527433 23.465731040925295 27.92942815812742 18.08786175567296 2 33.806561669129664 23.674747165472663 30.113631038113418 12.405060127284258 3 28.251231757953704 22.66184690271846 36.10823848458623 12.978682854741605 4 26.373523374501286 26.16919371014556 33.427583254965306 14.029699660387852 5 20.408284411896112 36.16635059096263 30.510730431685467 12.91463456545579 6 19.356017883532093 39.79304591793696 31.104036291947722 9.746899906583227 7 37.159880151591366 55.745756410296465 6.432010397693013 0.662353040419157 8 85.20047114546459 3.4695426952144994 9.923423240468521 1.4065629188523796 9 81.96243958371736 4.422768698195088 10.990998872125248 2.623792845962302 10 55.54705049817071 20.01649633987459 15.519056709292625 8.917396452662066 11 51.34329570626517 17.210243977117575 20.94316573510252 10.503294581514727 12 44.922532813032106 19.68063335947337 24.149329367546578 11.24750445994795 13 21.645509902490385 43.13667904933593 23.8784519684695 11.33935907970419 14 13.306422637477311 45.3402526314474 28.841413311421526 12.511911419653766 15 11.81550343517532 21.87733346663709 53.535309353237245 12.77185374495034 16 12.96149916737224 15.001359073455578 52.39899897210306 19.638142787069118 17 14.377747437287352 15.778374173230315 32.804596480155965 37.03928190932636 18 20.02336981482234 21.059702378534762 37.752561150494735 21.164366656148168 19 29.2132058199587 22.502194825523087 28.16031443023579 20.124284924282428 20 31.577368771303867 21.338078113918474 27.20896301133186 19.8755901034458 21 20.739148501426246 28.11657413511377 30.243602200761703 20.900675162698278 22 21.17373957653146 24.217751686344595 27.333622852429617 27.274885884694335 23 17.907901684313792 30.297027846946456 26.955269299624145 24.839801169115603 24 18.058180841125875 22.59436187595877 43.767789021810785 15.579668261104567 25 15.760878055181507 23.869703909445093 40.31605487532454 20.053363160048864 26 14.567705290388695 34.47797519925266 30.69600182459517 20.258317685763473 27 16.0892426992761 33.92403560460023 32.131620796635744 17.855100899487926 28 13.544494815212873 27.804143455670772 42.86798866501495 15.783373064101403 29 13.325793339602775 24.067160098853066 41.925072874455985 20.681973687088178 30 17.76824517060277 30.403254277957075 34.118367487213774 17.710133064226376 31 30.279844159577095 25.366246863977054 26.202936223525402 18.150972752920445 32 31.752329951791946 24.382715085090496 28.07470842406841 15.79024653904915 33 29.10916640370418 25.318132539342837 26.12826529113853 19.44443576581446 34 18.66742066603972 25.768345148420195 30.589462962905106 24.974771222634978 35 20.08616838139038 24.108400948539543 32.815531553936474 22.989899116133607 36 31.316489153968963 24.11839873028172 26.429760896801024 18.135351218948294 37 20.422656223150486 33.840304182509506 27.87475278922489 17.862286805115115 38 19.67969606743504 34.818524639845535 24.07590815787747 21.425871134841955 39 20.43484101964877 32.66337781304773 26.37539795857794 20.526383208725562 40 23.89563565583886 25.79833849364672 25.658057118576817 24.6479687319376 41 16.780651792883454 23.93000303057759 27.30581652195919 31.983528654579764 42 20.963161298586876 25.179100886990696 23.66443695305104 30.19330086137138 43 21.37994382496384 25.353749636799332 26.130139875215185 27.136166663021644 44 18.728032217851663 30.058955669210896 29.25132236285074 21.9616897500867 45 16.369493018736467 38.86325221591459 23.047073930471676 21.72018083487726 46 21.135623033639412 33.35353718393731 26.551296431104348 18.959543351318924 47 21.49897991383162 27.88725001640261 26.89871934664496 23.715050723120807 48 22.632165988171373 23.779099012406622 31.817003102436647 21.771731896985354 49 20.373292175798493 23.61101130686629 33.695648777927396 22.32004773940782 50 18.51807880126597 33.63628694883323 27.232395312290087 20.613238937610717 51 17.962577053216318 34.019326961830345 25.339377825544958 22.67871815940838 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 219.0 1 281.5 2 344.0 3 2328.5 4 4313.0 5 3359.5 6 2406.0 7 2514.0 8 2622.0 9 2772.0 10 2922.0 11 2888.0 12 2854.0 13 2743.0 14 2632.0 15 2495.5 16 2359.0 17 2188.0 18 2017.0 19 1909.0 20 1801.0 21 1697.0 22 1593.0 23 1585.0 24 1577.0 25 1668.5 26 2186.5 27 2613.0 28 3229.5 29 3846.0 30 4281.5 31 4717.0 32 5189.0 33 5661.0 34 6213.5 35 6766.0 36 8479.0 37 10192.0 38 14474.0 39 18756.0 40 23351.0 41 27946.0 42 30148.0 43 32350.0 44 31660.5 45 30971.0 46 29833.0 47 28695.0 48 26310.0 49 23925.0 50 22637.0 51 21349.0 52 19211.0 53 17073.0 54 15280.5 55 13488.0 56 12444.5 57 11401.0 58 10020.0 59 8639.0 60 7641.0 61 6643.0 62 5778.5 63 4914.0 64 4090.0 65 3266.0 66 2787.0 67 2308.0 68 2024.0 69 1740.0 70 1593.0 71 1446.0 72 1204.5 73 963.0 74 754.5 75 398.0 76 250.0 77 175.0 78 100.0 79 69.5 80 39.0 81 30.5 82 22.0 83 18.0 84 14.0 85 12.0 86 10.0 87 5.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 320071.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.820394729963734 #Duplication Level Percentage of deduplicated Percentage of total 1 71.15801387754792 22.642760897838123 2 7.229145333720926 4.600685161585506 3 3.7898088665959673 3.6177964225860046 4 2.556318115681659 3.2537220598538994 5 1.9374575044763314 3.082533128248367 6 1.5135749631298057 2.889753166810843 7 1.3006346954912167 2.897069658701169 8 1.120685233816978 2.8528517206478354 9 0.9397360567269629 2.6912495040328404 >10 8.342656801373824 47.96181991354509 >50 0.09397360567154886 1.8291589418439576 >100 0.014995788139076947 0.6177785504453853 >500 9.997192092717963E-4 0.3041175562439693 >1k 0.0019994384185435927 0.7587033176170155 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1276 0.3986615469692662 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1109 0.3464856235022854 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 956 0.2986837295475066 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.01093507378050495 0.0 2 0.0 0.0 0.0 0.03499223609761584 0.0 3 0.0 0.0 0.0 0.0440527258014628 0.0 4 0.0 0.0 0.0 0.07154662559244668 0.0 5 0.0 0.0 0.0 0.12559713313608542 0.0 6 0.0 0.0 0.0 0.18589625426858417 0.0 7 0.0 0.0 0.0 0.222138213083972 0.0 8 0.0 0.0 0.0 0.5030133939032277 0.0 9 0.0 0.0 0.0 0.6204873293737951 0.0 10 0.0 0.0 0.0 0.885740976220901 0.0 11 0.0 0.0 0.0 1.0238353365347064 0.0 12 0.0 0.0 0.0 1.2222288179810106 0.0 13 0.0 0.0 0.0 1.2822155084340663 0.0 14 0.0 0.0 0.0 1.30346079463619 0.0 15 0.0 0.0 0.0 1.3384530307338058 0.0 16 0.0 0.0 0.0 1.4221844528245295 0.0 17 0.0 0.0 0.0 1.5137266419013282 0.0 18 0.0 0.0 0.0 1.6761905952116873 0.0 19 0.0 0.0 0.0 1.745862636727476 0.0 20 0.0 0.0 0.0 1.8152222475638218 0.0 21 0.0 0.0 0.0 1.8942672094629005 0.0 22 0.0 0.0 0.0 1.9698754338881062 0.0 23 0.0 0.0 0.0 2.05673116277326 0.0 24 0.0 0.0 0.0 2.1195297293413025 0.0 25 0.0 0.0 0.0 2.1682689153344104 0.0 26 0.0 0.0 0.0 2.228255605787466 0.0 27 0.0 0.0 0.0 2.288242296240522 0.0 28 0.0 0.0 0.0 2.3513532934880073 0.0 29 0.0 0.0 0.0 2.411652414620506 0.0 30 0.0 0.0 0.0 2.4981957128262167 0.0 31 0.0 0.0 0.0 2.571616922495321 0.0 32 0.0 0.0 0.0 2.648787300317742 0.0 33 0.0 0.0 0.0 2.7359554598823386 0.0 34 0.0 0.0 0.0 2.8096891002308864 0.0 35 0.0 0.0 0.0 2.918102545997607 0.0 36 0.0 0.0 0.0 3.0015215374088875 0.0 37 0.0 0.0 0.0 3.08306594474351 0.0 38 0.0 0.0 0.0 3.160861183924817 0.0 39 0.0 0.0 0.0 3.2464671900921984 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGGC 25 3.8844788E-5 45.0 4 GTGCACT 20 7.0256507E-4 45.0 39 CTCACGA 80 0.0 45.0 24 CATATAG 20 7.0256507E-4 45.0 2 AGTTTCG 20 7.0256507E-4 45.0 31 CTCAACT 20 7.0256507E-4 45.0 23 ATAGGCC 35 1.2082637E-7 45.0 5 ACGTTAG 25 3.8844788E-5 45.0 2 TATGGGT 20 7.0256507E-4 45.0 4 CCGTGAG 20 7.0256507E-4 45.0 24 TGTATGA 20 7.0256507E-4 45.0 1 GTGATAC 25 3.8844788E-5 45.0 9 AAGGTAC 20 7.0256507E-4 45.0 6 CGATTCT 35 1.2082637E-7 45.0 10 AGGAACG 20 7.0256507E-4 45.0 7 GGATAGT 25 3.8844788E-5 45.0 8 GTCAGAC 20 7.0256507E-4 45.0 44 GCCGATG 20 7.0256507E-4 45.0 9 TACTGAC 45 3.8380676E-10 45.0 20 GTGTATG 20 7.0256507E-4 45.0 1 >>END_MODULE