SRR1545733_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545733_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	452718
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1207	0.26661188642819594	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1056	0.2332577896173777	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	925	0.20432145397355528	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGTTAA	20	7.0287497E-4	45.000004	1
ACACGTG	20	7.0287497E-4	45.000004	42
CGCATCG	20	7.0287497E-4	45.000004	21
CACGACC	20	7.0287497E-4	45.000004	27
ATCGTAG	20	7.0287497E-4	45.000004	2
CGTTAAG	20	7.0287497E-4	45.000004	2
ACGGCCT	20	7.0287497E-4	45.000004	44
ACGTGAC	20	7.0287497E-4	45.000004	25
ACTCGAT	20	7.0287497E-4	45.000004	19
GGCATAT	20	7.0287497E-4	45.000004	8
GCGGACC	20	7.0287497E-4	45.000004	14
CGGTAGT	20	7.0287497E-4	45.000004	12
ACTCAAG	20	7.0287497E-4	45.000004	2
CTTACGT	20	7.0287497E-4	45.000004	22
AACACGT	20	7.0287497E-4	45.000004	41
TCACGAC	100	0.0	45.0	25
CGGGTAT	35	1.2097553E-7	45.0	6
GTTAGGC	55	1.8189894E-12	45.0	4
CACGACG	95	0.0	45.0	26
TGGATAA	25	3.8870465E-5	45.0	1