SRR1545731_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545731_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	391071
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1194	0.30531540308537325	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1063	0.2718176494805291	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	917	0.2344842752339089	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCTCAC	60	0.0	45.000004	22
AGGCGAT	260	0.0	45.000004	7
CTACGGG	30	2.1618143E-6	45.000004	3
TCGTAAG	30	2.1618143E-6	45.000004	2
CGGTCTA	60	0.0	45.000004	31
TCACGAA	20	7.027572E-4	45.0	34
CGTATGA	45	3.8380676E-10	45.0	15
CGCGGAT	20	7.027572E-4	45.0	39
ATTCGGT	25	3.88607E-5	45.0	38
GTTAGCG	25	3.88607E-5	45.0	1
TAACGTG	20	7.027572E-4	45.0	32
CACGAGG	35	1.2091732E-7	45.0	3
GAATAAC	20	7.027572E-4	45.0	9
CGCGAAG	20	7.027572E-4	45.0	2
GCGTTAG	20	7.027572E-4	45.0	2
TCGATAG	20	7.027572E-4	45.0	2
CTCGGTA	25	3.88607E-5	45.0	21
AATGACC	20	7.027572E-4	45.0	9
CGCTATG	25	3.88607E-5	45.0	24
GTATGAC	45	3.8380676E-10	45.0	16