##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545731_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 391071 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.03293263883029 31.0 31.0 33.0 30.0 33.0 2 31.18553919876442 31.0 31.0 33.0 30.0 34.0 3 31.10610860943409 31.0 31.0 34.0 28.0 34.0 4 35.072280992454054 35.0 35.0 37.0 32.0 37.0 5 32.83653607656922 35.0 35.0 37.0 28.0 37.0 6 34.024261579099445 35.0 35.0 37.0 28.0 37.0 7 15.24677360377016 0.0 0.0 35.0 0.0 37.0 8 24.90069066742356 17.0 17.0 35.0 17.0 37.0 9 32.76631609094001 32.0 32.0 37.0 27.0 39.0 10 35.57256610692176 37.0 35.0 37.0 32.0 39.0 11 36.52543911463647 37.0 35.0 39.0 32.0 39.0 12 36.24950967982796 37.0 35.0 39.0 32.0 39.0 13 35.775818201809905 37.0 35.0 39.0 31.0 39.0 14 36.81475997964564 39.0 35.0 40.0 31.0 41.0 15 37.26064065093039 39.0 35.0 41.0 32.0 41.0 16 37.37192223407003 39.0 35.0 41.0 32.0 41.0 17 37.34534649718338 39.0 35.0 41.0 32.0 41.0 18 37.246597165220635 39.0 35.0 40.0 32.0 41.0 19 37.14852801665171 39.0 35.0 40.0 32.0 41.0 20 37.22971532023597 39.0 35.0 40.0 32.0 41.0 21 37.03472003804936 39.0 35.0 40.0 32.0 41.0 22 37.08922932152985 39.0 35.0 40.0 32.0 41.0 23 37.0789600865316 39.0 35.0 40.0 32.0 41.0 24 36.888465265898006 38.0 35.0 40.0 32.0 41.0 25 36.62020451529262 38.0 35.0 40.0 31.0 41.0 26 36.50335361098113 38.0 35.0 40.0 31.0 41.0 27 36.391338145758695 38.0 35.0 40.0 31.0 41.0 28 36.3266465680145 38.0 35.0 40.0 31.0 41.0 29 36.37629228452123 38.0 35.0 40.0 31.0 41.0 30 36.11781492363279 38.0 35.0 40.0 30.0 41.0 31 35.94661838898819 38.0 34.0 40.0 30.0 41.0 32 35.781062773767424 38.0 34.0 40.0 29.0 41.0 33 35.542118950267344 38.0 34.0 40.0 29.0 41.0 34 35.3633534575563 38.0 34.0 40.0 27.0 41.0 35 35.17041662511411 38.0 34.0 40.0 26.0 41.0 36 34.93309910476614 38.0 34.0 40.0 25.0 41.0 37 34.731391486456424 38.0 34.0 40.0 24.0 41.0 38 34.67339434527234 38.0 33.0 40.0 24.0 41.0 39 34.59009233617425 37.0 33.0 40.0 23.0 41.0 40 34.420297081604105 37.0 33.0 40.0 23.0 41.0 41 34.32893771207786 37.0 33.0 40.0 23.0 41.0 42 34.28196414461824 37.0 33.0 40.0 23.0 41.0 43 34.184255544389636 37.0 33.0 40.0 23.0 41.0 44 33.9066435506596 36.0 33.0 40.0 22.0 41.0 45 33.83999324930767 36.0 33.0 40.0 22.0 41.0 46 33.83823397797331 36.0 33.0 40.0 22.0 41.0 47 33.8026368613372 36.0 33.0 40.0 22.0 41.0 48 33.79884215398227 36.0 33.0 40.0 22.0 41.0 49 33.72131403249026 36.0 33.0 40.0 22.0 41.0 50 33.550414119175294 36.0 33.0 40.0 21.0 41.0 51 33.35064988199074 35.0 32.0 40.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 1.0 14 6.0 15 15.0 16 50.0 17 130.0 18 287.0 19 514.0 20 900.0 21 1482.0 22 2359.0 23 3376.0 24 4865.0 25 6416.0 26 7578.0 27 7940.0 28 8321.0 29 9437.0 30 11380.0 31 14764.0 32 19715.0 33 30329.0 34 39482.0 35 39606.0 36 43224.0 37 65614.0 38 62007.0 39 11271.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.04339365486063 24.66125077032048 29.08730128288725 16.208054291931646 2 32.783561041345436 24.563058881891013 30.255119914286666 12.39826016247689 3 28.846680014626504 23.00502977720158 34.77143536595656 13.376854842215351 4 26.81252253427127 27.231628016395998 31.480217147269933 14.475632302062797 5 20.553812479063904 36.994049673844394 29.874370638579695 12.57776720851201 6 19.850103945319393 40.45505803294031 29.581840637633576 10.112997384106723 7 37.495237437703125 57.1195511812433 4.776370531182318 0.608840849871251 8 87.77715555487366 2.9214643888194214 7.865835104111529 1.4355449521953814 9 83.35570778707702 4.6523521304315585 9.601837006579368 2.3901030759120467 10 54.000424475351025 21.383329369858668 14.500180274170162 10.116065880620143 11 49.111030989257706 18.173170600734906 20.5333558356411 12.182442574366291 12 44.19120824607297 19.819930396270756 23.96981622262965 12.019045135026632 13 20.409081726847557 43.10675043662148 24.010985217518048 12.473182619012915 14 14.251120640497506 45.129145347008595 26.972595769054724 13.647138243439173 15 12.867740129030278 21.868407527021947 51.06285047983614 14.201001864111632 16 13.787010542842603 16.08787151182266 50.15610976012028 19.96900818521445 17 14.039650089114254 17.17386356953085 30.471960334568404 38.314526006786494 18 20.772187147602352 21.993704467986632 36.280112818388474 20.953995566022538 19 29.101109517197642 22.834472512663943 26.704613740215972 21.359804229922442 20 31.536728624725434 21.895001163471594 25.17675818457518 21.391512027227794 21 21.05193174640922 27.753783839763113 29.30618736751127 21.8880970463164 22 21.642617325242732 24.10789856573359 25.739571586745118 28.50991252227856 23 18.2023213176124 29.3381508728594 25.703516752712424 26.75601105681577 24 18.42862293547719 22.70227145454406 42.437306780610164 16.431798829368578 25 16.117277936742944 24.267204676388687 38.620608534000226 20.99490885286815 26 15.579523922765942 34.03192770622214 28.65771177100833 21.73083660000358 27 16.56399988748846 33.816877242239904 29.92960357582127 19.68951929445037 28 13.714900874777214 28.027135737500352 41.04753356807332 17.210429819649118 29 13.992344101199015 22.96565073861268 39.7135047088636 23.328500451324697 30 17.848165678355084 30.27966788639403 33.515397459796304 18.356768975454585 31 29.208762603210157 25.91933434082302 25.781251997719085 19.090651058247733 32 30.70414323741725 24.622383147817146 26.983846922937264 17.689626691828337 33 27.9184598193167 27.208102876459773 25.003132423524114 19.870304880699415 34 18.43066859981947 27.275865507797814 28.695812269383307 25.597653622999406 35 19.883601698924235 24.74537871639677 31.731578153327654 23.63944143135134 36 32.11488450946248 23.99206282235195 25.935443947518483 17.95760872066709 37 20.21730069475875 32.643433033899214 28.99754775986969 18.14171851147234 38 20.21551073845926 32.50407215058135 25.169854067419983 22.110563043539408 39 20.445392268923037 32.092637909740176 27.665564565002263 19.79640525633453 40 24.328574606657103 25.856941578383463 25.898366281314644 23.916117533644783 41 17.519069427290695 23.55659202548898 27.95681602573446 30.96752252148587 42 22.26552211746716 25.188265046500508 24.139606363038936 28.406606472993396 43 21.993960176029418 25.902713318041993 25.98326135151929 26.1200651544093 44 19.193445691447334 29.895594406130854 29.291356301029737 21.619603601392072 45 17.123233377059407 38.25903736150213 22.564956235568477 22.052773025869982 46 22.27063627832286 32.599451250540184 25.639078325930587 19.49083414520637 47 21.35801427362295 27.742532685880565 27.11911647757057 23.780336562925914 48 22.299019871072005 23.900007926949325 31.163650590302016 22.637321611676654 49 20.78599538191275 24.03553318962541 32.625789178947045 22.552682249514795 50 20.026031078755523 32.64292161781365 26.968760148412947 20.362287155017885 51 18.393079517530065 33.68160768760659 24.44441035003874 23.480902444824597 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 330.0 1 431.0 2 532.0 3 2316.5 4 4101.0 5 3160.0 6 2219.0 7 2285.0 8 2351.0 9 2466.5 10 2582.0 11 2582.5 12 2583.0 13 2528.0 14 2473.0 15 2351.5 16 2230.0 17 2037.0 18 1844.0 19 1737.5 20 1631.0 21 1650.0 22 1669.0 23 1764.0 24 1859.0 25 2147.0 26 2826.0 27 3217.0 28 3956.5 29 4696.0 30 5681.0 31 6666.0 32 7646.5 33 8627.0 34 9159.0 35 9691.0 36 11131.5 37 12572.0 38 16872.0 39 21172.0 40 27387.0 41 33602.0 42 37405.0 43 41208.0 44 39796.5 45 38385.0 46 36536.0 47 34687.0 48 32043.0 49 29399.0 50 27235.0 51 25071.0 52 22723.0 53 20375.0 54 18574.0 55 16773.0 56 15282.5 57 13792.0 58 12399.5 59 11007.0 60 9942.5 61 8878.0 62 7859.5 63 6841.0 64 5829.0 65 4817.0 66 4161.0 67 3505.0 68 3073.5 69 2642.0 70 2231.0 71 1820.0 72 1536.0 73 1252.0 74 962.0 75 550.5 76 429.0 77 322.5 78 216.0 79 187.0 80 158.0 81 100.5 82 43.0 83 29.0 84 15.0 85 8.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 391071.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.975176071078565 #Duplication Level Percentage of deduplicated Percentage of total 1 71.92703888398633 22.279526937027903 2 7.320836558270474 4.535284027600334 3 3.672359940889073 3.412559872962441 4 2.393777512654339 2.9659071971782653 5 1.7251778943489928 2.671884451569631 6 1.3942040651056926 2.5911429837397386 7 1.1853255900653936 2.570096819768146 8 0.9840279033772301 2.438435005277119 9 0.8297774934077349 2.3132253562310536 >10 8.4264288134513 50.37934542775345 >50 0.12702329265667306 2.49385237631822 >100 0.01154757205969755 0.5378095740344078 >500 8.248265756926822E-4 0.2342856909214023 >1k 0.0016496531513853644 0.5766442796178899 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1194 0.30531540308537325 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1063 0.2718176494805291 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 917 0.2344842752339089 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006648409112411813 0.0 2 0.0 0.0 0.0 0.033753461647629206 0.0 3 0.0 0.0 0.0 0.04500461553017227 0.0 4 0.0 0.0 0.0 0.07313250023652994 0.0 5 0.0 0.0 0.0 0.12964397769203034 0.0 6 0.0 0.0 0.0 0.20533355835641098 0.0 7 0.0 0.0 0.0 0.2541737945283593 0.0 8 0.0 0.0 0.0 0.630576033507982 0.0 9 0.0 0.0 0.0 0.8128958680137366 0.0 10 0.0 0.0 0.0 1.1026130804892207 0.0 11 0.0 0.0 0.0 1.328147574225652 0.0 12 0.0 0.0 0.0 1.5498464473203075 0.0 13 0.0 0.0 0.0 1.6401113864234371 0.0 14 0.0 0.0 0.0 1.6595451976751026 0.0 15 0.0 0.0 0.0 1.7048055212480597 0.0 16 0.0 0.0 0.0 1.8037645338058819 0.0 17 0.0 0.0 0.0 1.9282943506422108 0.0 18 0.0 0.0 0.0 2.149226099608511 0.0 19 0.0 0.0 0.0 2.226705636572387 0.0 20 0.0 0.0 0.0 2.319016240017797 0.0 21 0.0 0.0 0.0 2.4225779973457504 0.0 22 0.0 0.0 0.0 2.5215370099035725 0.0 23 0.0 0.0 0.0 2.6358385050284987 0.0 24 0.0 0.0 0.0 2.721756407404282 0.0 25 0.0 0.0 0.0 2.7895190387423257 0.0 26 0.0 0.0 0.0 2.86086158267936 0.0 27 0.0 0.0 0.0 2.9357840392153856 0.0 28 0.0 0.0 0.0 3.015309240521542 0.0 29 0.0 0.0 0.0 3.099181478555045 0.0 30 0.0 0.0 0.0 3.2106701852093353 0.0 31 2.557080427850697E-4 0.0 0.0 3.311674862109438 0.0 32 2.557080427850697E-4 0.0 0.0 3.3970813483996514 0.0 33 2.557080427850697E-4 0.0 0.0 3.490926200101772 0.0 34 2.557080427850697E-4 0.0 0.0 3.583492511589967 0.0 35 2.557080427850697E-4 0.0 0.0 3.7123693651536422 0.0 36 2.557080427850697E-4 0.0 0.0 3.8200224511661567 0.0 37 2.557080427850697E-4 0.0 0.0 3.9138673028682773 0.0 38 2.557080427850697E-4 0.0 0.0 4.0102692349982485 0.0 39 2.557080427850697E-4 0.0 0.0 4.105904042999865 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCTCAC 60 0.0 45.000004 22 AGGCGAT 260 0.0 45.000004 7 CTACGGG 30 2.1618143E-6 45.000004 3 TCGTAAG 30 2.1618143E-6 45.000004 2 CGGTCTA 60 0.0 45.000004 31 TCACGAA 20 7.027572E-4 45.0 34 CGTATGA 45 3.8380676E-10 45.0 15 CGCGGAT 20 7.027572E-4 45.0 39 ATTCGGT 25 3.88607E-5 45.0 38 GTTAGCG 25 3.88607E-5 45.0 1 TAACGTG 20 7.027572E-4 45.0 32 CACGAGG 35 1.2091732E-7 45.0 3 GAATAAC 20 7.027572E-4 45.0 9 CGCGAAG 20 7.027572E-4 45.0 2 GCGTTAG 20 7.027572E-4 45.0 2 TCGATAG 20 7.027572E-4 45.0 2 CTCGGTA 25 3.88607E-5 45.0 21 AATGACC 20 7.027572E-4 45.0 9 CGCTATG 25 3.88607E-5 45.0 24 GTATGAC 45 3.8380676E-10 45.0 16 >>END_MODULE