##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545729_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 347182 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.056762735395267 31.0 31.0 33.0 30.0 33.0 2 31.209838067641755 31.0 31.0 33.0 30.0 34.0 3 31.15557834219516 31.0 31.0 34.0 28.0 34.0 4 35.07604944956824 35.0 35.0 37.0 32.0 37.0 5 32.78537769815255 35.0 35.0 37.0 28.0 37.0 6 33.98604766376137 35.0 35.0 37.0 28.0 37.0 7 15.09755690099141 0.0 0.0 35.0 0.0 37.0 8 24.834858950060774 17.0 17.0 35.0 17.0 37.0 9 32.80484299301231 32.0 32.0 37.0 27.0 39.0 10 35.663366764405986 37.0 35.0 37.0 32.0 39.0 11 36.5857763363308 37.0 35.0 39.0 33.0 39.0 12 36.115510020680794 37.0 35.0 39.0 32.0 39.0 13 35.42056039771647 37.0 35.0 39.0 30.0 39.0 14 36.413924108968786 38.0 35.0 40.0 30.0 41.0 15 36.97549124090535 39.0 35.0 41.0 32.0 41.0 16 37.17759273234211 39.0 35.0 41.0 32.0 41.0 17 37.18621645131372 39.0 35.0 41.0 32.0 41.0 18 37.09418114994441 38.0 35.0 40.0 32.0 41.0 19 36.98776722295511 38.0 35.0 40.0 32.0 41.0 20 37.06954853650247 39.0 35.0 40.0 32.0 41.0 21 36.83780553139275 38.0 35.0 40.0 32.0 41.0 22 36.9046494345905 38.0 35.0 40.0 32.0 41.0 23 36.918656497168634 38.0 35.0 40.0 32.0 41.0 24 36.75676446359546 38.0 35.0 40.0 32.0 41.0 25 36.50669965608816 38.0 35.0 40.0 31.0 41.0 26 36.37386730878905 38.0 35.0 40.0 31.0 41.0 27 36.24494069392998 38.0 34.0 40.0 31.0 41.0 28 36.25220201508143 38.0 35.0 40.0 31.0 41.0 29 36.356614110178526 38.0 35.0 40.0 31.0 41.0 30 36.095926632141065 38.0 35.0 40.0 30.0 41.0 31 35.91418621933165 38.0 34.0 40.0 30.0 41.0 32 35.739234752953784 38.0 34.0 40.0 30.0 41.0 33 35.52231682518103 38.0 34.0 40.0 29.0 41.0 34 35.4040416841887 38.0 34.0 40.0 29.0 41.0 35 35.24877153769493 38.0 34.0 40.0 27.0 41.0 36 35.00213144690681 37.0 34.0 40.0 26.0 41.0 37 34.793215086035566 37.0 34.0 40.0 25.0 41.0 38 34.808417487081705 37.0 34.0 40.0 25.0 41.0 39 34.74965291979423 37.0 34.0 40.0 25.0 41.0 40 34.56216336100374 37.0 33.0 40.0 24.0 41.0 41 34.48977193518097 37.0 33.0 40.0 23.0 41.0 42 34.46215817640316 37.0 33.0 40.0 23.0 41.0 43 34.37244442396207 37.0 33.0 40.0 23.0 41.0 44 34.13876007396697 36.0 33.0 40.0 23.0 41.0 45 34.00913929869636 36.0 33.0 40.0 23.0 41.0 46 34.02761087844416 36.0 33.0 40.0 23.0 41.0 47 34.04139327499698 36.0 33.0 40.0 23.0 41.0 48 34.0764210126101 36.0 33.0 40.0 23.0 41.0 49 34.010251107488294 36.0 33.0 40.0 23.0 41.0 50 33.840619617376476 36.0 33.0 40.0 23.0 41.0 51 33.6446964416358 35.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 6.0 15 20.0 16 45.0 17 131.0 18 208.0 19 461.0 20 808.0 21 1250.0 22 1870.0 23 2798.0 24 3950.0 25 5280.0 26 6236.0 27 6828.0 28 7207.0 29 8214.0 30 10251.0 31 13628.0 32 18695.0 33 29837.0 34 37625.0 35 35175.0 36 35721.0 37 56154.0 38 55917.0 39 8865.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.443634750649515 24.807449694972668 30.59663231388724 15.152283240490577 2 31.367409600728145 24.07354067895225 32.43658945452241 12.12246026579719 3 29.74491765126072 22.962884020484932 33.852849514087715 13.439348814166632 4 26.34209146787564 28.048401126786526 31.00045509271794 14.609052312619895 5 21.10823717819472 37.29023970136701 29.19102948885599 12.410493631582282 6 19.68103185072959 40.5478970683964 29.199670489829543 10.571400591044466 7 37.804091225927614 57.46092827393126 4.056085856985673 0.6788946431554631 8 89.62964669827352 2.66171633322004 6.486223364114499 1.222413604391933 9 86.40223283465157 3.7095817179462065 8.003583135070366 1.8846023123318605 10 62.86184191576753 17.841938810191774 11.522486764866843 7.773732509173863 11 59.717669694857456 15.190015611408425 17.053879521403758 8.038435172330363 12 52.90193616028481 20.532458479990325 17.978754658939692 8.58685070078518 13 19.817271632745936 51.9399047185626 18.33389979895271 9.908923849738754 14 11.39056748333727 51.982821690064576 25.168355502301388 11.458255324296767 15 9.280435045595683 20.974877729836226 58.6695162767655 11.075170947802594 16 10.999130139235328 13.913451734248897 56.238226636173536 18.84919149034224 17 11.831546566354247 14.741835694246822 29.28723263302821 44.139385106370725 18 20.05835555990806 21.133296081018024 37.89395763605256 20.914390723021356 19 30.957826154581745 22.547251873657046 25.257933879060552 21.23698809270066 20 35.03609058073287 20.598994187486678 24.400746582484114 19.964168649296337 21 20.286766018975637 29.954893974918058 27.770448928803916 21.987891077302393 22 22.21946990339361 24.37280734600296 23.49142524670058 29.91629750390285 23 17.11839899533962 32.811896930140385 23.64293079710354 26.426773277416455 24 17.383965758593476 21.43573111509237 46.75847250145457 14.421830624859583 25 13.903946633177988 24.45720112217799 41.45577823735101 20.183074007293005 26 13.635211502900496 38.847636110167 27.76123186109879 19.755920525833712 27 14.942306916833244 39.00461429451988 28.604305522751755 17.44877326589512 28 11.482738160388498 29.431825382652328 43.88908411150348 15.196352345455697 29 11.806199630165159 23.31946932732688 42.197464154247626 22.676866888260335 30 16.479829023394068 33.27879901607802 32.807288396287824 17.434083564240083 31 32.66010334637164 26.590664262548174 23.27223185533812 17.47700053574206 32 34.45627941540748 24.89501183817133 25.648507123065134 15.00020162335605 33 30.212971870661498 27.77592156275383 23.552200286881234 18.45890627970344 34 17.832433709120863 26.501373919154798 28.781158009343805 26.885034362380537 35 19.19339136245543 24.60352207199682 33.08927306139143 23.113813504156322 36 34.807104054933724 23.66395723280585 24.827612030577622 16.701326681682808 37 19.458094025611928 35.26910957365301 28.623603758259357 16.649192642475704 38 19.30226797472219 35.538132737296294 23.601453992430482 21.558145295551036 39 19.91030640989452 34.26502526052618 26.2461763570692 19.578491972510097 40 25.259374045889476 25.04162082135595 23.586764290775445 26.112240841979133 41 14.875771209336888 23.033164161736497 28.03227125830256 34.05879337062405 42 21.39886284427188 24.32470577391685 22.728136827370083 31.548294554441185 43 22.294934645229304 25.93077982153453 24.33248267479305 27.441802858443122 44 18.978230438213963 32.192337160336656 27.764400228122426 21.06503217332696 45 15.517509548306077 42.59955873288362 19.768593993928256 22.11433772488205 46 21.003681066414735 36.19081634416531 24.973932980396448 17.83156960902351 47 20.97747003012829 27.497969364771212 26.65547176984982 24.869088835250675 48 22.602554279887784 22.2505775068984 33.09445766197556 22.052410551238253 49 20.961340161644326 22.82693227183437 33.940411657286376 22.271315909234925 50 17.849427677702185 36.79223001192458 25.09001042680784 20.26833188356539 51 16.356838776203837 37.7637665547177 22.654112252363316 23.22528241671515 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 319.0 1 346.0 2 373.0 3 1454.0 4 2535.0 5 2042.0 6 1549.0 7 1681.0 8 1813.0 9 1921.5 10 2030.0 11 2025.0 12 2020.0 13 1983.0 14 1946.0 15 1834.0 16 1722.0 17 1609.0 18 1496.0 19 1404.5 20 1313.0 21 1175.0 22 1037.0 23 1120.5 24 1204.0 25 1400.0 26 1787.5 27 1979.0 28 2675.5 29 3372.0 30 4234.5 31 5097.0 32 5903.5 33 6710.0 34 7551.5 35 8393.0 36 9999.5 37 11606.0 38 17191.5 39 22777.0 40 30111.5 41 37446.0 42 39582.5 43 41719.0 44 39023.0 45 36327.0 46 34540.0 47 32753.0 48 30167.0 49 27581.0 50 25091.0 51 22601.0 52 20142.5 53 17684.0 54 15371.5 55 13059.0 56 11668.5 57 10278.0 58 9226.0 59 8174.0 60 7215.5 61 6257.0 62 5371.5 63 4486.0 64 3609.0 65 2732.0 66 2184.0 67 1636.0 68 1447.5 69 1259.0 70 1090.5 71 922.0 72 774.0 73 626.0 74 484.5 75 260.5 76 178.0 77 140.5 78 103.0 79 80.5 80 58.0 81 44.0 82 30.0 83 28.0 84 26.0 85 16.0 86 6.0 87 4.5 88 3.0 89 4.5 90 6.0 91 3.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 347182.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.840337344678005 #Duplication Level Percentage of deduplicated Percentage of total 1 71.62172706296747 18.507295885155337 2 6.088303813271209 3.1464764878363507 3 3.2303010711936953 2.5041620821355948 4 2.2505099595376366 2.3261574620804075 5 1.6831451406150726 2.174651911677449 6 1.3476307781480945 2.0893940354050615 7 1.1481056257175661 2.076720567310517 8 0.9942817651845329 2.0554060982424205 9 0.8371139076833903 1.9468175193414408 >10 10.483430495023018 57.00727572281973 >50 0.29092773622551915 4.759175302867084 >100 0.021178647464692966 0.7120184802207488 >500 0.0022293313120729436 0.3879809437125196 >1k 0.0011146656560364718 0.30646750119533844 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1064 0.30646750119533844 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 729 0.20997632365733243 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 618 0.1780046200551872 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008641000973552776 0.0 2 0.0 0.0 0.0 0.03341187043107074 0.0 3 0.0 0.0 0.0 0.04147680467305333 0.0 4 0.0 0.0 0.0 0.06307930710693527 0.0 5 0.0 0.0 0.0 0.09937151119585692 0.0 6 0.0 0.0 0.0 0.1509294836713885 0.0 7 0.0 0.0 0.0 0.18693365439452506 0.0 8 0.0 0.0 0.0 0.4798635873979642 0.0 9 0.0 0.0 0.0 0.600837601027703 0.0 10 0.0 0.0 0.0 0.8024609570772678 0.0 11 0.0 0.0 0.0 0.9712485094273321 0.0 12 0.0 0.0 0.0 1.108064358175251 0.0 13 0.0 0.0 0.0 1.1688393983559056 0.0 14 0.0 0.0 0.0 1.1910179675213577 0.0 15 0.0 0.0 0.0 1.2255819714155687 0.0 16 0.0 0.0 0.0 1.3076714806643202 0.0 17 0.0 0.0 0.0 1.4064669251286068 0.0 18 0.0 0.0 0.0 1.590808279231066 0.0 19 0.0 0.0 0.0 1.6512952860459356 0.0 20 0.0 0.0 0.0 1.7207113272001429 0.0 21 0.0 0.0 0.0 1.8076974036672409 0.0 22 0.0 0.0 0.0 1.870200644042606 0.0 23 0.0 0.0 0.0 1.973028555627884 0.0 24 0.0 0.0 0.0 2.0418685300505213 0.0 25 0.0 0.0 0.0 2.0844974681867146 0.0 26 0.0 0.0 0.0 2.1366315073938167 0.0 27 0.0 0.0 0.0 2.1884775132351333 0.0 28 0.0 0.0 0.0 2.244067952831656 0.0 29 0.0 0.0 0.0 2.3031147928176 0.0 30 0.0 0.0 0.0 2.387508568992632 0.0 31 0.0 0.0 0.0 2.4592288770731203 0.0 32 0.0 0.0 0.0 2.5200039172537747 0.0 33 0.0 0.0 0.0 2.5790507572397185 0.0 34 0.0 0.0 0.0 2.6588359995621893 0.0 35 0.0 0.0 0.0 2.7720331123157305 0.0 36 0.0 0.0 0.0 2.844905553859359 0.0 37 0.0 0.0 0.0 2.9125933948188556 0.0 38 0.0 0.0 0.0 2.991514537043971 0.0 39 0.0 0.0 0.0 3.0666912455138804 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 55 1.8189894E-12 45.000004 25 TTAGGCA 35 1.2086457E-7 45.000004 5 TTAGGAC 45 3.8380676E-10 45.000004 5 TTTACGG 35 1.2086457E-7 45.000004 2 TAGACGG 35 1.2086457E-7 45.000004 2 TAACGGG 35 1.2086457E-7 45.000004 3 GACGGTC 55 1.8189894E-12 45.000004 29 ACTAACC 55 1.8189894E-12 45.000004 14 CGGTCTA 55 1.8189894E-12 45.000004 31 TGAATTC 45 3.8380676E-10 45.000004 15 GGTCTAA 55 1.8189894E-12 45.000004 32 AGTACGG 35 1.2086457E-7 45.000004 2 ACGACGG 55 1.8189894E-12 45.000004 27 ATTTACG 25 3.885162E-5 45.0 1 CTTCGCA 20 7.026477E-4 45.0 28 TAGAGAT 25 3.885162E-5 45.0 4 TTGGCCG 25 3.885162E-5 45.0 36 ACTGCAA 25 3.885162E-5 45.0 1 GGTGTTA 25 3.885162E-5 45.0 1 GCGACCG 20 7.026477E-4 45.0 32 >>END_MODULE