##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545728_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1157468 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.522643390573215 31.0 31.0 33.0 30.0 34.0 2 31.7133691816966 31.0 31.0 34.0 30.0 34.0 3 31.76613867510808 31.0 31.0 34.0 30.0 34.0 4 35.67728870258184 37.0 35.0 37.0 35.0 37.0 5 27.018523190273942 35.0 22.0 37.0 0.0 37.0 6 31.294496262531663 35.0 25.0 37.0 17.0 37.0 7 15.105904439690773 0.0 0.0 32.0 0.0 37.0 8 25.14972508959211 17.0 17.0 35.0 17.0 37.0 9 33.185317434261684 32.0 32.0 37.0 28.0 39.0 10 36.018039375602605 37.0 35.0 39.0 32.0 39.0 11 36.99893560772306 39.0 37.0 39.0 34.0 39.0 12 37.068348325828445 39.0 35.0 39.0 34.0 39.0 13 36.64738290820999 39.0 35.0 39.0 33.0 39.0 14 37.94673891632425 40.0 37.0 41.0 33.0 41.0 15 38.19268610449706 40.0 37.0 41.0 33.0 41.0 16 38.25539885335923 40.0 37.0 41.0 34.0 41.0 17 38.273145348294726 40.0 37.0 41.0 34.0 41.0 18 38.242754011342 40.0 37.0 41.0 34.0 41.0 19 38.19640197396386 40.0 37.0 41.0 34.0 41.0 20 38.231139003410895 40.0 37.0 41.0 34.0 41.0 21 38.09525706110234 40.0 36.0 41.0 34.0 41.0 22 38.011410250650556 40.0 36.0 41.0 34.0 41.0 23 37.92384325095813 40.0 36.0 41.0 34.0 41.0 24 37.78089675049332 40.0 35.0 41.0 33.0 41.0 25 37.60564006953108 39.0 35.0 41.0 33.0 41.0 26 37.35843496321281 39.0 35.0 40.0 33.0 41.0 27 37.163410997107476 39.0 35.0 40.0 33.0 41.0 28 37.200586106916134 39.0 35.0 40.0 33.0 41.0 29 37.13148700439235 39.0 35.0 40.0 33.0 41.0 30 36.925571160498606 39.0 35.0 40.0 32.0 41.0 31 36.74096735287714 38.0 35.0 40.0 32.0 41.0 32 36.54109228073692 38.0 35.0 40.0 31.0 41.0 33 36.3294829749073 38.0 35.0 40.0 31.0 41.0 34 36.07576278566665 38.0 35.0 40.0 30.0 41.0 35 35.88378598803595 38.0 35.0 40.0 30.0 41.0 36 35.701559783942194 38.0 35.0 40.0 29.0 41.0 37 35.591600804514684 38.0 35.0 40.0 29.0 41.0 38 35.40233768881731 38.0 34.0 40.0 28.0 41.0 39 35.33438419031887 38.0 34.0 40.0 27.0 41.0 40 35.09048111913245 38.0 34.0 40.0 27.0 41.0 41 34.88397346622109 38.0 34.0 40.0 26.0 41.0 42 34.88792519534017 38.0 34.0 40.0 26.0 41.0 43 34.78349811830651 37.0 34.0 40.0 26.0 41.0 44 34.57087366562186 37.0 34.0 40.0 25.0 40.0 45 34.38626726613608 37.0 33.0 40.0 25.0 40.0 46 34.31913798048844 37.0 33.0 39.0 24.0 40.0 47 34.13576530841458 36.0 33.0 39.0 24.0 40.0 48 34.03342727401535 36.0 33.0 39.0 24.0 40.0 49 33.909723638148094 36.0 33.0 39.0 24.0 40.0 50 33.990578573230536 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 10.0 14 9.0 15 24.0 16 48.0 17 163.0 18 349.0 19 753.0 20 1424.0 21 2507.0 22 4153.0 23 6060.0 24 9435.0 25 13709.0 26 17365.0 27 19041.0 28 20138.0 29 22641.0 30 27541.0 31 36915.0 32 51107.0 33 88015.0 34 94421.0 35 120759.0 36 164337.0 37 294950.0 38 127813.0 39 33777.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.15604751060072 22.928409251918843 26.98078910172895 14.934754135751485 2 34.907833305110806 23.350969530043166 28.937387469891174 12.803809694954849 3 31.179004516755537 23.29723154333424 32.342233219406495 13.18153072050372 4 26.893270483503645 26.446001098950468 31.135893173720568 15.524835243825317 5 17.37490798881697 47.84451924372855 23.25757601938023 11.522996748074245 6 20.89975705591861 40.34910684355852 28.901360555972172 9.849775544550692 7 39.48541125974973 55.34641130467538 4.137133812770634 1.031043622804259 8 86.7450331240259 3.185228446920347 8.231329073460346 1.838409355593416 9 81.96563533505893 4.808340273769987 10.167797295475987 3.058227095695086 10 46.60413938009517 24.119198111740452 16.094354228367436 13.182308279796937 11 39.553490895644636 22.76926878324066 22.159230319974288 15.51801000114042 12 34.760097039399795 21.62634301769034 27.602663745347606 16.010896197562268 13 23.144916317340954 31.807618007582068 28.582647641230686 16.464818033846292 14 18.518092940798365 34.21761983916618 31.289072354484098 15.97521486555136 15 17.12418831449336 23.16089948059039 43.02304685745092 16.691865347465328 16 20.086343639737773 19.122947675443296 40.99033407403056 19.800374610788378 17 20.599532773260254 19.032405215522157 30.001520560395623 30.366541450821966 18 23.523069320274946 22.36580190553864 33.07659477411038 21.03453400007603 19 28.426099036863224 23.81819626978888 27.27652081958205 20.47918387376584 20 30.012319995023624 23.754090825837086 25.955101998500176 20.278487180639118 21 25.479149315575032 25.277243085769975 29.631920709687005 19.611686888967988 22 24.02243517747359 22.261695355724736 28.376335242097404 25.33953422470427 23 22.08769486499843 27.411988927555665 27.409569854198995 23.090746353246917 24 21.832396230392547 24.637570973884376 33.89216807721682 19.637864718506258 25 22.11179920308812 23.680136297504554 32.57256356115244 21.635500938254882 26 20.238399679299988 28.786540967007294 28.30013443136225 22.674924922330465 27 20.16729620170925 27.976237787999324 30.671431089239615 21.185034921051813 28 18.95076148973449 25.891774113841592 35.468626346473506 19.68883804995041 29 19.93869376950378 25.017883863743968 34.52389180521621 20.519530561536044 30 22.678639927842497 26.047631554392865 31.344279064302427 19.92944945346221 31 28.998901049532254 23.902863837272392 26.710803236028983 20.387431877166367 32 28.7519827761977 25.29694125453144 27.34788348360387 18.60319248566699 33 27.775886676780697 24.561024581241124 27.023122885470702 20.63996585650748 34 21.87153338148441 26.85344216859559 28.963824485860517 22.31119996405948 35 22.574792564459663 25.43750669564947 30.16515359387905 21.82254714601181 36 28.96373809038349 25.090628855398162 26.023527216303172 19.922105837915176 37 22.659373736466147 29.768339167907882 26.79979057736369 20.772496518262276 38 23.154419819813594 30.400667664246438 24.46322490124997 21.981687614689996 39 22.66481665151866 28.123455680848195 25.752677395832972 23.459050271800173 40 24.35877276952797 25.20916344987507 27.060532127022086 23.371531653574873 41 20.50363379376363 24.570441688236738 27.58693976852924 27.338984749470395 42 22.911994111284287 26.13653250025055 25.773325914841706 25.178147473623465 43 23.201505354791667 25.733324808979603 26.51753655392633 24.547633282302407 44 21.665134586874107 27.268140458310725 29.049442403591286 22.01728255122388 45 20.836601962214075 30.74780469092882 25.857475109463067 22.558118237394037 46 23.58043591701887 28.465668165340208 27.509961398500867 20.443934519140054 47 22.582308970960753 27.106408125321824 27.58287918110911 22.728403722608313 48 22.975926764282036 26.162278352403696 29.132036479626215 21.729758403688052 49 22.043373985285122 25.454613000100217 30.237380212671106 22.264632801943552 50 20.83478765719657 29.504746567507702 27.6966620243497 21.96380375094603 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 646.0 1 1291.5 2 1937.0 3 8936.0 4 15935.0 5 11237.0 6 6539.0 7 6576.5 8 6614.0 9 6671.5 10 6729.0 11 6623.0 12 6517.0 13 6341.5 14 6166.0 15 5777.0 16 5388.0 17 5286.0 18 5184.0 19 5295.5 20 5407.0 21 5559.0 22 5711.0 23 6156.0 24 6601.0 25 7081.0 26 7561.0 27 9064.0 28 10567.0 29 12827.0 30 15087.0 31 17919.0 32 20751.0 33 23633.0 34 26515.0 35 29178.5 36 31842.0 37 35373.5 38 38905.0 39 49179.5 40 59454.0 41 71216.0 42 82978.0 43 87279.0 44 91580.0 45 92693.0 46 93806.0 47 92609.0 48 91412.0 49 90057.0 50 88702.0 51 82188.5 52 75675.0 53 70578.0 54 65481.0 55 62504.5 56 59528.0 57 56931.0 58 54334.0 59 51261.5 60 48189.0 61 42558.0 62 36927.0 63 31702.0 64 26477.0 65 22512.5 66 18548.0 67 15647.5 68 12747.0 69 10896.5 70 9046.0 71 7299.5 72 5553.0 73 4230.5 74 2908.0 75 2327.0 76 1746.0 77 1342.0 78 938.0 79 702.0 80 466.0 81 343.0 82 220.0 83 145.0 84 70.0 85 50.0 86 30.0 87 30.5 88 31.0 89 21.0 90 11.0 91 8.0 92 5.0 93 3.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1157468.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.762958849575888 #Duplication Level Percentage of deduplicated Percentage of total 1 68.95745388935957 17.765480469230976 2 7.119676300235558 3.6684785509053888 3 3.7353099130807985 2.8869790674334053 4 2.5623946207905215 2.640594686872033 5 1.9733343873976252 2.5419466309489036 6 1.6068521849253887 2.4838360030550346 7 1.3897240912726883 2.5062383203005765 8 1.1933850942285398 2.45961048594457 9 1.0043719095840897 2.328803295865638 >10 10.062405526171448 52.01373391085314 >50 0.3521392900195875 5.611853609519752 >100 0.04110137944573084 1.9599062803335183 >500 3.702826977088403E-4 0.04817486841410315 >1k 0.001110848093126521 0.5946972865218199 >5k 3.702826977088403E-4 0.4896665338011712 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5133 0.4434679835641244 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2308 0.19940076097136164 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2134 0.1843679479691879 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1792 0.15482069482698443 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008985129610494632 0.0 2 0.0 0.0 0.0 0.03032481243541938 0.0 3 0.0 0.0 0.0 0.03982831490805793 0.0 4 0.0 0.0 0.0 0.052182868122488055 0.0 5 0.0 0.0 0.0 0.0885553639495865 0.0 6 0.0 0.0 0.0 0.16259628775914323 0.0 7 0.0 0.0 0.0 0.21106415036959986 0.0 8 0.0 0.0 0.0 0.4561681186866505 0.0 9 0.0 0.0 0.0 0.5685686342948574 0.0 10 0.0 0.0 0.0 0.7596754294719162 0.0 11 0.0 0.0 0.0 0.9210621805527237 0.0 12 0.0 0.0 0.0 1.0650834407517098 0.0 13 0.0 0.0 0.0 1.1263378339617165 0.0 14 0.0 0.0 0.0 1.1525156634999845 0.0 15 0.0 0.0 0.0 1.1851731538150514 0.0 16 0.0 0.0 0.0 1.2640522243379515 0.0 17 0.0 0.0 0.0 1.3545082887820656 0.0 18 0.0 0.0 0.0 1.4965424530095 0.0 19 0.0 0.0 0.0 1.5588335919437946 0.0 20 0.0 0.0 0.0 1.6276043916548881 0.0 21 0.0 0.0 0.0 1.7181468515760263 0.0 22 0.0 0.0 0.0 1.8057518652783489 0.0 23 0.0 0.0 0.0 1.9052794548099818 0.0 24 0.0 0.0 0.0 1.9808754972059703 0.0 25 0.0 0.0 0.0 2.048436760238728 0.0 26 0.0 0.0 0.0 2.115134068501246 0.0 27 0.0 0.0 0.0 2.1873606872932987 0.0 28 0.0 0.0 0.0 2.2627839387352395 0.0 29 0.0 0.0 0.0 2.3480562745579143 0.0 30 0.0 0.0 0.0 2.4589016715796896 0.0 31 0.0 0.0 0.0 2.555146232984411 0.0 32 0.0 0.0 0.0 2.638690659266606 0.0 33 8.639547702398684E-5 0.0 0.0 2.729492305618816 0.0 34 8.639547702398684E-5 0.0 0.0 2.8327349006624805 0.0 35 8.639547702398684E-5 0.0 0.0 2.958872297117501 0.0 36 8.639547702398684E-5 0.0 0.0 3.064274779086765 0.0 37 8.639547702398684E-5 0.0 0.0 3.1614696907387505 0.0 38 8.639547702398684E-5 0.0 0.0 3.294777911786762 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGTAA 30 2.5277313E-6 44.000004 1 ACTTACG 20 7.8565034E-4 44.000004 31 CGTACAT 20 7.8565034E-4 44.000004 35 TTACGTT 20 7.8565034E-4 44.000004 33 CGGTATC 20 7.8565034E-4 44.000004 33 AATCGCG 30 2.5277313E-6 44.000004 19 CCCGTAT 35 1.4460966E-7 44.0 34 TATTACG 25 4.44286E-5 44.0 1 GTCCGAT 25 4.44286E-5 44.0 42 CAATCGA 35 1.4460966E-7 44.0 29 CGTTTTA 2705 0.0 43.02403 1 CGTTATT 1525 0.0 41.980328 1 AGGCGAT 870 0.0 40.459766 7 CTACGGG 195 0.0 39.48718 3 GTTTTAT 3255 0.0 39.40399 2 ATATACG 45 2.3510438E-8 39.11111 1 ATAGGCG 130 0.0 38.92308 5 ATAACGC 85 0.0 38.82353 11 CCGTATG 40 4.1245767E-7 38.500004 35 TCAATCG 40 4.1245767E-7 38.500004 28 >>END_MODULE