##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545727_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 443174 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.005322965697445 31.0 31.0 33.0 30.0 33.0 2 31.17279668933647 31.0 31.0 33.0 30.0 34.0 3 31.108239653048237 31.0 31.0 34.0 28.0 34.0 4 35.08695455960864 35.0 35.0 37.0 32.0 37.0 5 32.83046613745391 35.0 35.0 37.0 28.0 37.0 6 34.00239860641644 35.0 35.0 37.0 28.0 37.0 7 15.521346017591284 0.0 0.0 35.0 0.0 37.0 8 25.01229313994052 17.0 17.0 35.0 17.0 37.0 9 32.69570191392094 32.0 32.0 37.0 27.0 39.0 10 35.48413038671041 37.0 34.0 37.0 32.0 39.0 11 36.43986109293415 37.0 35.0 39.0 32.0 39.0 12 36.372325542563416 37.0 35.0 39.0 32.0 39.0 13 36.146870078118305 38.0 35.0 39.0 32.0 39.0 14 37.16152572127426 39.0 36.0 40.0 32.0 41.0 15 37.46029776115025 39.0 36.0 41.0 32.0 41.0 16 37.47674051275571 39.0 36.0 41.0 32.0 41.0 17 37.430158357665384 39.0 36.0 41.0 32.0 41.0 18 37.35628443906908 39.0 36.0 40.0 32.0 41.0 19 37.315363717185576 39.0 36.0 40.0 32.0 41.0 20 37.43130463429714 39.0 35.0 41.0 32.0 41.0 21 37.295969528898354 39.0 35.0 41.0 32.0 41.0 22 37.3408954496428 39.0 35.0 41.0 32.0 41.0 23 37.33153343833347 39.0 35.0 41.0 32.0 41.0 24 37.15704215500007 39.0 35.0 40.0 32.0 41.0 25 36.90669353346541 39.0 35.0 40.0 31.0 41.0 26 36.783200277994645 38.0 35.0 40.0 31.0 41.0 27 36.71699152026066 38.0 35.0 40.0 31.0 41.0 28 36.63057850866702 38.0 35.0 40.0 31.0 41.0 29 36.605315293767234 38.0 35.0 40.0 31.0 41.0 30 36.32914837061741 38.0 35.0 40.0 30.0 41.0 31 36.195322830310445 38.0 35.0 40.0 30.0 41.0 32 36.09825486152166 38.0 35.0 40.0 30.0 41.0 33 35.903441988925344 38.0 35.0 40.0 29.0 41.0 34 35.719498436280105 38.0 35.0 40.0 28.0 41.0 35 35.512730891252644 38.0 34.0 40.0 27.0 41.0 36 35.33557699684548 38.0 34.0 40.0 26.0 41.0 37 35.2289710136425 38.0 34.0 40.0 26.0 41.0 38 35.077470699995935 38.0 34.0 40.0 25.0 41.0 39 34.970661636287325 38.0 34.0 40.0 25.0 41.0 40 34.811586419780944 38.0 34.0 40.0 24.0 41.0 41 34.66702920297671 38.0 34.0 40.0 24.0 41.0 42 34.62587155383664 38.0 33.0 40.0 24.0 41.0 43 34.57473588252019 38.0 33.0 40.0 23.0 41.0 44 34.35745779310158 37.0 33.0 40.0 23.0 41.0 45 34.260279258259736 37.0 33.0 40.0 23.0 41.0 46 34.23655268585251 37.0 33.0 40.0 23.0 41.0 47 34.14214281523736 37.0 33.0 40.0 23.0 41.0 48 34.073979971749246 37.0 33.0 40.0 23.0 41.0 49 33.984529778371474 36.0 33.0 40.0 23.0 41.0 50 33.865788606732345 36.0 33.0 40.0 23.0 41.0 51 33.69854052809957 36.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 4.0 14 5.0 15 23.0 16 48.0 17 132.0 18 261.0 19 503.0 20 820.0 21 1427.0 22 2194.0 23 3338.0 24 4625.0 25 6348.0 26 7544.0 27 8161.0 28 9090.0 29 10572.0 30 12627.0 31 16565.0 32 21516.0 33 31477.0 34 39954.0 35 44358.0 36 55016.0 37 81464.0 38 69919.0 39 15183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.909764562000476 23.491675955719423 27.206469693619212 14.392089788660886 2 34.451028264293484 23.076263499212498 29.612748040273118 12.859960196220898 3 31.777811875245387 22.850392847955884 32.0932635939834 13.278531682815329 4 27.47115128595089 26.992332582687613 29.733693763623315 15.802822367738178 5 21.364746126803468 36.172699661983785 28.098895693339408 14.36365851787334 6 20.91842030444024 41.08837612314802 28.274673153208447 9.718530419203294 7 38.7062417921629 56.10437435409117 4.371646351094604 0.8177375026513288 8 87.38441334554825 3.327812552180408 7.506983712943449 1.7807903893278936 9 82.39314580729014 5.001195918533127 9.449335926746604 3.1563223474301285 10 46.77846624576352 24.734754295152694 15.436826167600085 13.049953291483707 11 39.679674349126984 23.33643219141917 21.538267136610003 15.44562632284385 12 34.976329838844336 22.115467062598437 27.133135066587844 15.775068031969383 13 23.387653607838004 32.44572109374648 27.868060851945287 16.298564446470234 14 18.463853926448753 35.01310997486314 30.798512548118794 15.724523550569302 15 17.116978884140316 23.743270137688583 42.56003285391291 16.579718124258193 16 19.970485633182452 19.473164039406644 40.72373379304743 19.832616534363478 17 20.54227007902088 19.397121672300273 29.59943498490435 30.461173263774498 18 23.411571978500547 22.708913429036905 32.92408850699725 20.955426085465305 19 28.853452594240636 23.96372530879519 26.84995058374363 20.33287151322054 20 30.29442160415548 24.07812732696413 25.49608054624143 20.131370522638964 21 25.69735589181676 25.74880295324184 29.182668658359923 19.37117249658148 22 23.911150022338855 22.674615388086846 27.813680405438944 25.600554184135348 23 22.089743531885897 27.98359109514547 26.952393416581298 22.974271956387334 24 21.712465081435283 25.15783868187213 33.75604164504236 19.373654591650233 25 21.965638778448195 24.05037299119533 32.42857207327145 21.555416157085027 26 20.170858398732776 29.266157310672558 28.052638467058085 22.51034582353658 27 20.163637758532765 28.773348617021753 30.195363446411566 20.867650178033912 28 18.93048779937451 26.54126821519313 35.07854702667576 19.449696958756608 29 19.77755915283839 25.58227693862907 34.16536168638052 20.47480222215202 30 22.697405533718136 26.69402988442463 30.863498309918903 19.745066271938335 31 29.230505399684997 24.270828162301942 26.38828090095538 20.110385537057677 32 29.281952461110084 25.44147445472884 26.91132602544373 18.365247058717344 33 28.17200467536453 24.717153984665167 26.524796129736856 20.586045210233454 34 21.976695383754464 26.976537432250087 28.438942717758714 22.607824466236735 35 22.685671993393115 25.502398606416442 30.12857252456146 21.683356875628988 36 29.25013651522878 25.26186102975355 25.73661812290432 19.751384332113346 37 22.500643088267815 30.565872546674672 26.414681366686676 20.518802998370845 38 23.085514944468763 30.983090163231598 24.137923253620475 21.793471638679165 39 22.588870285711707 28.80493891789681 25.39002739330376 23.216163403087727 40 24.535735399639872 25.338805976884927 26.864843154156155 23.26061546931905 41 20.38702631472063 24.75641621575273 27.346143952488188 27.510413517038458 42 22.582326580530445 26.218370211248853 25.615672399554125 25.583630808666573 43 23.036549978112433 25.77249567889813 26.31562320894276 24.87533113404667 44 21.51976424609747 27.39646278888202 29.302034866666364 21.781738098354143 45 20.842603582340118 31.36104554870096 25.612513369466622 22.1838374994923 46 23.531163831813238 29.21651540929748 27.111021855975302 20.141298902913977 47 22.423698141136438 27.306656076394376 27.178264067837915 23.09138171463127 48 22.803909976668308 26.471995198274268 29.185827688447425 21.538267136610003 49 21.929986867460634 25.86049723133577 30.261703078249173 21.947812822954415 50 20.74422235961496 30.317663039799264 27.380667638444496 21.55744696214128 51 21.399721102772272 30.680951499862356 25.812209199998193 22.107118197367175 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 298.0 1 495.5 2 693.0 3 2832.5 4 4972.0 5 3577.5 6 2183.0 7 2230.0 8 2277.0 9 2262.5 10 2248.0 11 2215.5 12 2183.0 13 2101.0 14 2019.0 15 1943.5 16 1868.0 17 1851.0 18 1834.0 19 1911.5 20 1989.0 21 2038.0 22 2087.0 23 2280.5 24 2474.0 25 2710.0 26 3262.0 27 3578.0 28 4348.0 29 5118.0 30 6231.5 31 7345.0 32 8776.0 33 10207.0 34 11065.5 35 11924.0 36 12990.0 37 14056.0 38 16936.5 39 19817.0 40 24677.0 41 29537.0 42 31939.5 43 34342.0 44 34884.5 45 35427.0 46 34853.0 47 34279.0 48 33373.5 49 32468.0 50 31534.5 51 30601.0 52 28675.0 53 26749.0 54 25439.5 55 24130.0 56 22847.5 57 21565.0 58 20409.5 59 19254.0 60 17327.5 61 15401.0 62 13663.0 63 11925.0 64 10183.5 65 8442.0 66 7072.0 67 5702.0 68 4871.0 69 4040.0 70 3532.0 71 3024.0 72 2523.0 73 2022.0 74 1539.0 75 792.5 76 529.0 77 404.0 78 279.0 79 215.0 80 151.0 81 109.5 82 68.0 83 48.5 84 29.0 85 26.0 86 23.0 87 15.0 88 7.0 89 6.0 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 443174.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.659555205402114 #Duplication Level Percentage of deduplicated Percentage of total 1 66.12837388689906 24.24236773150247 2 9.502312637910261 6.9670110945692265 3 5.284278257329584 5.811578714858397 4 3.7473862785006236 5.495100566106399 5 2.7012459975039134 4.951323838443309 6 2.2104005104581947 4.8619379723514715 7 1.778792639611441 4.5646822879558995 8 1.44871221195458 4.24873162487113 9 1.1889551072571634 3.922790885211489 >10 5.958538973453669 32.55807079895127 >50 0.033797499417863745 0.8317077788681926 >100 0.0153624997353926 0.8145870336910572 >500 6.14499989415704E-4 0.15814161992564216 >1k 0.001228999978831408 0.5719680526940248 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1305 0.2944667331567285 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1234 0.27844593771295245 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 702 0.1584027943877574 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0060924151687599005 0.0 2 0.0 0.0 0.0 0.025272240700041068 0.0 3 0.0 0.0 0.0 0.0331698159188039 0.0 4 0.0 0.0 0.0 0.047385451312577 0.0 5 0.0 0.0 0.0 0.08912977746889483 0.0 6 0.0 0.0 0.0 0.13696651879397256 0.0 7 0.0 0.0 0.0 0.16787988465027281 0.0 8 0.0 0.0 0.0 0.3756989354068605 0.0 9 0.0 0.0 0.0 0.46866467798201156 0.0 10 0.0 0.0 0.0 0.618492962132255 0.0 11 0.0 0.0 0.0 0.7536543208762246 0.0 12 0.0 0.0 0.0 0.8633177939139028 0.0 13 0.0 0.0 0.0 0.9136366303077347 0.0 14 0.0 0.0 0.0 0.9371037109577728 0.0 15 0.0 0.0 0.0 0.968017076814073 0.0 16 0.0 0.0 0.0 1.0330028386141785 0.0 17 0.0 0.0 0.0 1.1137837508518098 0.0 18 0.0 0.0 0.0 1.2277344790082452 0.0 19 0.0 0.0 0.0 1.275119930320822 0.0 20 0.0 0.0 0.0 1.3371723070396728 0.0 21 0.0 0.0 0.0 1.4087017740210392 0.0 22 0.0 0.0 0.0 1.4858723661586646 0.0 23 0.0 0.0 0.0 1.56304295829629 0.0 24 0.0 0.0 0.0 1.6302851701588992 0.0 25 0.0 0.0 0.0 1.6842143266527367 0.0 26 0.0 0.0 0.0 1.7435589632965833 0.0 27 0.0 0.0 0.0 1.8094473051216904 0.0 28 0.0 0.0 0.0 1.8784946770343025 0.0 29 0.0 0.0 0.0 1.9468651139281636 0.0 30 0.0 0.0 0.0 2.048631011747079 0.0 31 0.0 0.0 0.0 2.1375351442097235 0.0 32 0.0 0.0 0.0 2.2115467062598437 0.0 33 0.0 0.0 0.0 2.2945840685599785 0.0 34 0.0 0.0 0.0 2.390031906203884 0.0 35 0.0 0.0 0.0 2.5087211794915767 0.0 36 0.0 0.0 0.0 2.5996561170104746 0.0 37 0.0 0.0 0.0 2.688560249473119 0.0 38 0.0 0.0 0.0 2.7923569523482876 0.0 39 0.0 0.0 0.0 2.96610360716107 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTACGG 50 2.1827873E-11 45.000004 2 AATAGGC 50 2.1827873E-11 45.000004 4 ATCGAAG 25 3.8869126E-5 45.000004 2 TCGCAAC 40 6.7993824E-9 45.0 16 AATCTCG 20 7.0285896E-4 45.0 18 CTCGAGC 20 7.0285896E-4 45.0 36 CGACGCT 30 2.1624728E-6 44.999996 12 CGTACAT 30 2.1624728E-6 44.999996 35 CGTAAAG 30 2.1624728E-6 44.999996 2 CGTTTTA 730 0.0 43.150684 1 AGGATGC 85 0.0 42.35294 7 AGGCGAT 375 0.0 41.999996 7 CGTTTTT 1045 0.0 41.339714 1 CGACGGT 100 0.0 40.500004 28 CGGTCTA 100 0.0 40.500004 31 ATAACGC 50 1.0786607E-9 40.500004 11 GGTCTAA 100 0.0 40.500004 32 CGACGTC 45 1.9237632E-8 40.0 18 TAACGGG 45 1.9237632E-8 40.0 3 CGTCAGA 45 1.9237632E-8 40.0 31 >>END_MODULE