SRR1545725_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545725_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	404185
Sequences flagged as poor quality	0
Sequence length	51
%GC	43

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	1270	0.3142125511832453	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1193	0.2951618689461509	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1010	0.24988557220084864	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGGT	65	0.0	45.000004	28
CGGTCTA	60	0.0	45.000004	31
ATGCCTC	30	2.1619962E-6	45.000004	43
TTCGCGA	30	2.1619962E-6	45.000004	1
CCGCAGG	30	2.1619962E-6	45.000004	3
TCGCCAG	20	7.027852E-4	45.0	25
TTTAGCG	20	7.027852E-4	45.0	1
AGCGTAA	25	3.8863018E-5	45.0	1
AGTCCAC	20	7.027852E-4	45.0	16
TCCGCGT	20	7.027852E-4	45.0	29
TCACCGA	20	7.027852E-4	45.0	1
CGTATGG	25	3.8863018E-5	45.0	2
CGAGTGT	20	7.027852E-4	45.0	16
TTAGCCT	25	3.8863018E-5	45.0	28
CGTGCAG	25	3.8863018E-5	45.0	2
CGCATCG	20	7.027852E-4	45.0	21
CGACAAG	25	3.8863018E-5	45.0	2
CTGCGAA	35	1.2093187E-7	45.0	1
TCGTGAA	20	7.027852E-4	45.0	1
CGTAGTC	20	7.027852E-4	45.0	13