##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545724_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1441008 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.474728800950444 31.0 31.0 33.0 30.0 34.0 2 31.656649373216528 31.0 31.0 34.0 30.0 34.0 3 31.71427431353608 31.0 31.0 34.0 30.0 34.0 4 35.632858388017276 37.0 35.0 37.0 33.0 37.0 5 27.151820114808523 35.0 26.0 37.0 0.0 37.0 6 31.35328048144077 35.0 27.0 37.0 17.0 37.0 7 14.97870032643816 0.0 0.0 32.0 0.0 37.0 8 25.069298019164364 17.0 17.0 35.0 17.0 37.0 9 33.101374870923685 32.0 32.0 37.0 28.0 39.0 10 35.91230860619788 37.0 35.0 39.0 32.0 39.0 11 36.907794405027595 38.0 37.0 39.0 34.0 39.0 12 37.060764409357894 39.0 37.0 39.0 34.0 39.0 13 36.7170910917913 39.0 35.0 39.0 33.0 39.0 14 38.04244320642217 40.0 37.0 41.0 33.0 41.0 15 38.26145517582137 40.0 37.0 41.0 33.0 41.0 16 38.2927291173956 40.0 37.0 41.0 34.0 41.0 17 38.30735082664357 40.0 37.0 41.0 34.0 41.0 18 38.27892003375415 40.0 37.0 41.0 34.0 41.0 19 38.22556085739982 40.0 37.0 41.0 34.0 41.0 20 38.25914915114975 40.0 37.0 41.0 34.0 41.0 21 38.15799634700154 40.0 37.0 41.0 34.0 41.0 22 38.07020988086118 40.0 36.0 41.0 34.0 41.0 23 37.96284614658628 40.0 36.0 41.0 34.0 41.0 24 37.80922867881372 40.0 35.0 41.0 33.0 41.0 25 37.63073973218747 39.0 35.0 41.0 33.0 41.0 26 37.38332472824578 39.0 35.0 40.0 33.0 41.0 27 37.195166161464755 39.0 35.0 40.0 33.0 41.0 28 37.203604004974295 39.0 35.0 40.0 32.0 41.0 29 37.089615047244706 39.0 35.0 40.0 32.0 41.0 30 36.87533240620454 39.0 35.0 40.0 32.0 41.0 31 36.71486417840845 39.0 35.0 40.0 31.0 41.0 32 36.53891026281603 39.0 35.0 40.0 31.0 41.0 33 36.328644948536024 38.0 35.0 40.0 30.0 41.0 34 36.07226052874099 38.0 35.0 40.0 30.0 41.0 35 35.86830399276062 38.0 35.0 40.0 29.0 41.0 36 35.677365427534056 38.0 35.0 40.0 29.0 41.0 37 35.56477410257264 38.0 35.0 40.0 28.0 41.0 38 35.37483344991839 38.0 34.0 40.0 27.0 41.0 39 35.283092113298466 38.0 34.0 40.0 27.0 41.0 40 35.03481451872578 38.0 34.0 40.0 26.0 41.0 41 34.823663713178554 38.0 34.0 40.0 25.0 40.0 42 34.836336092513015 38.0 34.0 40.0 26.0 40.0 43 34.71363101384586 37.0 34.0 40.0 25.0 40.0 44 34.49226652454393 37.0 34.0 40.0 24.0 40.0 45 34.30053337663635 37.0 33.0 40.0 24.0 40.0 46 34.208669903289916 37.0 33.0 39.0 24.0 40.0 47 34.01511788969943 36.0 33.0 39.0 24.0 40.0 48 33.90390129686997 36.0 33.0 39.0 23.0 40.0 49 33.74905274641085 36.0 33.0 39.0 24.0 40.0 50 33.85593417940775 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 2.0 13 7.0 14 7.0 15 27.0 16 92.0 17 242.0 18 504.0 19 1093.0 20 1889.0 21 3379.0 22 5394.0 23 8229.0 24 12148.0 25 17360.0 26 22458.0 27 24042.0 28 25776.0 29 28848.0 30 34972.0 31 46124.0 32 62366.0 33 102539.0 34 115058.0 35 150449.0 36 212425.0 37 369071.0 38 154553.0 39 41950.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.843312459056435 23.169337019641805 25.815817816417397 15.171532704884358 2 34.99925052463276 23.548863018109543 28.88887500971542 12.563011447542276 3 31.199410412711103 23.63789791590331 32.072826799018465 13.089864872367121 4 27.789019908286424 26.490900813874735 30.219748953510322 15.500330324328527 5 17.12419362002154 47.92707604676726 23.455525576540868 11.49320475667033 6 20.569767829186237 40.67312603399842 29.023364200615127 9.733741936200216 7 38.901865916080965 55.747990295681916 4.261114442112744 1.0890293461243796 8 86.18800173212084 3.1765264314979516 8.552138503047866 2.083333333333333 9 81.20183926806791 5.064371606542087 10.39876253289364 3.3350265924963636 10 43.06069084973851 26.20013212973141 16.933563172445954 13.80561384808412 11 35.95975872444844 24.206041881793855 23.623116596160465 16.211082797597236 12 32.33972330479775 22.136032554989285 28.97888144965191 16.545362690561053 13 23.649834005085328 29.647788214916226 29.330996080521416 17.37138169947703 14 19.560196751163076 32.5959328470071 30.84542209342349 16.99844830840634 15 18.22092590742036 23.88716787137892 39.52684509732076 18.36506112387995 16 20.194544374493407 20.209117506634243 38.49055661037274 21.105781508499604 17 20.474279115730102 20.50564604776656 30.743063189100962 28.27701164740237 18 23.08404949868425 23.678286310693625 32.422720762133174 20.814943428488945 19 27.33378301855368 25.175987919567415 26.82740137459334 20.662827687285567 20 27.47132562761622 25.048993482340137 26.851342948824712 20.628337941218923 21 24.481404683388295 26.093470681633967 29.237103472014038 20.188021162963704 22 23.570028757647425 23.434915003941686 27.896652898526586 25.0984033398843 23 21.76878962504025 27.712337474878694 27.68721617090259 22.831656729178466 24 21.66046267612671 25.550517415586864 33.578925307840066 19.210094600446354 25 22.774890909696545 24.651424558364702 31.106975117417807 21.466709414520945 26 20.105717664301658 28.04509065876109 27.950642883315012 23.898548793622243 27 20.590517193520093 27.10123746710636 30.52113520535625 21.787110134017297 28 19.811340395056792 26.54613992427523 33.55775956830219 20.08476011236579 29 20.147493976438717 25.43809611050043 32.585107091702476 21.829302821358382 30 22.340056404960972 26.124490634333746 31.537021307307107 19.99843165339818 31 27.5436361213817 24.774463431153748 26.74003197761567 20.941868469848885 32 26.68500105481718 25.510892375337264 27.128093667765896 20.676012902079655 33 25.9508621742558 25.08764698044702 26.74558364700265 22.215907198294527 34 21.471567125234557 26.35627283124035 29.362154824955866 22.810005218569223 35 22.35664201725459 25.25960993970887 29.16361324850382 23.220134794532715 36 27.779651466195887 26.29409413410613 25.386049209997445 20.54020518970054 37 22.10265314280004 29.710660870723828 26.750927128787627 21.43575885768851 38 22.516252512130396 30.82911406459922 24.461279881860477 22.193353541409902 39 21.99835115419207 28.012405205245216 25.446770593917588 24.542473046645128 40 23.50521301755438 25.723937688062797 27.364317200182093 23.406532094200728 41 20.958384686275163 24.673284256575954 28.080482551103113 26.28784850604577 42 22.090647657750687 27.336697644981843 25.57098919645137 25.001665500816095 43 22.189397976971676 26.73073293139247 26.699504791090682 24.380364300545175 44 21.675035808267545 27.197211951633854 28.20331323629015 22.924439003808445 45 20.95762133173445 30.14938154403029 25.991666944250134 22.90133017998512 46 23.197095366576733 28.289919278727115 27.60886823667877 20.90411711801739 47 22.576557520846517 27.242111077801095 28.001371262338587 22.1799601390138 48 22.182944161309308 27.059599946703973 28.52565704007195 22.23179885191477 49 22.296128820936456 25.987572588077235 29.304139879861875 22.412158711124437 50 21.302726980002888 28.262091535924856 28.753275484938325 21.681905999133942 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 901.0 1 1591.0 2 2281.0 3 11393.0 4 20505.0 5 14597.5 6 8690.0 7 8551.0 8 8412.0 9 8553.0 10 8694.0 11 8479.5 12 8265.0 13 8061.0 14 7857.0 15 7530.0 16 7203.0 17 6918.0 18 6633.0 19 6538.0 20 6443.0 21 6958.5 22 7474.0 23 7953.0 24 8432.0 25 9642.0 26 10852.0 27 13668.0 28 16484.0 29 19437.0 30 22390.0 31 25186.0 32 27982.0 33 32783.5 34 37585.0 35 39851.0 36 42117.0 37 46486.0 38 50855.0 39 61815.0 40 72775.0 41 84281.5 42 95788.0 43 99526.0 44 103264.0 45 106936.0 46 110608.0 47 113187.5 48 115767.0 49 112124.0 50 108481.0 51 101504.5 52 94528.0 53 87069.0 54 79610.0 55 76319.0 56 73028.0 57 70407.5 58 67787.0 59 62051.5 60 56316.0 61 50984.0 62 45652.0 63 39847.5 64 34043.0 65 29013.5 66 23984.0 67 20849.0 68 17714.0 69 15508.0 70 13302.0 71 11135.0 72 8968.0 73 6847.0 74 4726.0 75 3505.0 76 2284.0 77 1720.5 78 1157.0 79 915.5 80 674.0 81 475.5 82 277.0 83 200.5 84 124.0 85 95.0 86 66.0 87 42.0 88 18.0 89 14.0 90 10.0 91 5.0 92 0.0 93 0.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1441008.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.204896913440514 #Duplication Level Percentage of deduplicated Percentage of total 1 70.17989548684056 19.794167176023674 2 7.598967424136662 4.286561856927342 3 3.8489783831243067 3.2568011555424596 4 2.6208064899522143 2.956783075167123 5 1.9485611174910373 2.7479482724186575 6 1.5677732672947018 2.6531330032616927 7 1.3070258575807603 2.5805170703386566 8 1.104216740869055 2.4915455477045563 9 0.9473971888926763 2.404911604392114 >10 8.544214949887195 47.769971323431555 >50 0.2876601959901359 5.106524176124764 >100 0.03919791673609427 2.0424841427876546 >500 0.004126096492437253 0.7699943265813212 >1k 8.841635340936973E-4 0.5911075954139884 >5k 2.947211780312324E-4 0.5475496738843962 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6587 0.45711057815084993 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2896 0.20097043180884488 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2781 0.19298990706505445 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008327504080477 0.0 2 0.0 0.0 0.0 0.025051908108768308 0.0 3 0.0 0.0 0.0 0.03469793366865417 0.0 4 0.0 0.0 0.0 0.052185692237655866 0.0 5 0.0 0.0 0.0 0.09708481840489436 0.0 6 0.0 0.0 0.0 0.19354507400375293 0.0 7 0.0 0.0 0.0 0.26092846118827934 0.0 8 0.0 0.0 0.0 0.6646736173567391 0.0 9 0.0 0.0 0.0 0.8549570855956387 0.0 10 0.0 0.0 0.0 1.160229506012458 0.0 11 0.0 0.0 0.0 1.3523866626694647 0.0 12 0.0 0.0 0.0 1.5391309416741614 0.0 13 0.0 0.0 0.0 1.619838335387451 0.0 14 0.0 0.0 0.0 1.652246205433974 0.0 15 0.0 0.0 0.0 1.6957574142544662 0.0 16 0.0 0.0 0.0 1.7818082897527285 0.0 17 0.0 0.0 0.0 1.886318465962715 0.0 18 0.0 0.0 0.0 2.0455819815018375 0.0 19 0.0 0.0 0.0 2.111855034808967 0.0 20 0.0 0.0 0.0 2.189994781430776 0.0 21 0.0 0.0 0.0 2.2817361180506976 0.0 22 0.0 0.0 0.0 2.3766696645681358 0.0 23 0.0 0.0 0.0 2.4893685531239242 0.0 24 0.0 0.0 0.0 2.5779176798463297 0.0 25 0.0 0.0 0.0 2.647035963714289 0.0 26 0.0 0.0 0.0 2.7183055194697046 0.0 27 0.0 0.0 0.0 2.793530639663347 0.0 28 0.0 0.0 0.0 2.880830640773681 0.0 29 0.0 0.0 0.0 2.9723637897915904 0.0 30 0.0 0.0 0.0 3.089504013856967 0.0 31 0.0 0.0 0.0 3.189989229761389 0.0 32 0.0 0.0 0.0 3.2913765919411966 0.0 33 0.0 0.0 0.0 3.3913066409069206 0.0 34 0.0 0.0 0.0 3.4910285022706327 0.0 35 0.0 0.0 0.0 3.612401874243585 0.0 36 0.0 0.0 0.0 3.7121931314746344 0.0 37 0.0 0.0 0.0 3.8135804936544417 0.0 38 0.0 0.0 0.0 3.9442529118505933 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 20 7.857146E-4 44.000004 19 CGTTTAG 65 0.0 44.000004 2 CGATACG 30 2.528166E-6 44.000004 10 CGTTTTA 3515 0.0 43.56188 1 CGGTCTA 370 0.0 42.81081 31 CGTTATT 1890 0.0 42.37037 1 AGGCGAT 1000 0.0 41.8 7 GCGATAT 140 0.0 40.857143 9 ATAACGC 115 0.0 40.173916 11 GTTTTAT 4170 0.0 39.621105 2 CGACGGT 395 0.0 39.544304 28 AGGTACC 495 0.0 39.11111 7 TCGAATA 45 2.3515895E-8 39.11111 1 CGTTTTT 1910 0.0 38.586384 1 CAAGGAC 1095 0.0 38.374428 5 TAACGGG 300 0.0 38.13333 3 TCTCACG 410 0.0 38.097565 23 ATAGGCG 185 0.0 38.054054 5 TCACGAC 405 0.0 38.024693 25 AGGCGCG 640 0.0 37.812504 7 >>END_MODULE