##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545723_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 550681 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.945894265464034 31.0 31.0 33.0 30.0 33.0 2 31.109322820289787 31.0 31.0 33.0 30.0 34.0 3 31.050190582206394 31.0 31.0 34.0 28.0 34.0 4 35.04166659100277 35.0 35.0 37.0 32.0 37.0 5 32.75412988644969 35.0 35.0 37.0 28.0 37.0 6 33.944140073835854 35.0 35.0 37.0 28.0 37.0 7 15.321678067701628 0.0 0.0 35.0 0.0 37.0 8 24.89023409196976 17.0 17.0 35.0 17.0 37.0 9 32.579469783776815 32.0 32.0 37.0 27.0 39.0 10 35.344900223541394 37.0 34.0 37.0 32.0 39.0 11 36.33701544088138 37.0 35.0 39.0 32.0 39.0 12 36.34996122982271 37.0 35.0 39.0 32.0 39.0 13 36.20922457829487 38.0 35.0 39.0 32.0 39.0 14 37.258153086814325 39.0 36.0 40.0 32.0 41.0 15 37.50453166170614 39.0 36.0 41.0 32.0 41.0 16 37.48371743350506 39.0 36.0 41.0 32.0 41.0 17 37.427541534935834 39.0 36.0 41.0 32.0 41.0 18 37.34913498014277 39.0 36.0 40.0 32.0 41.0 19 37.30645328239035 39.0 36.0 40.0 32.0 41.0 20 37.4156326439445 39.0 36.0 40.0 32.0 41.0 21 37.32220468837676 39.0 35.0 40.0 32.0 41.0 22 37.37124578476468 39.0 35.0 41.0 32.0 41.0 23 37.33046355330945 39.0 35.0 41.0 32.0 41.0 24 37.151172820562174 39.0 35.0 40.0 32.0 41.0 25 36.893934964162554 39.0 35.0 40.0 31.0 41.0 26 36.78155774395703 39.0 35.0 40.0 31.0 41.0 27 36.70749853363381 39.0 35.0 40.0 31.0 41.0 28 36.58528621833693 38.0 35.0 40.0 31.0 41.0 29 36.526896696998804 38.0 35.0 40.0 30.0 41.0 30 36.23917839910947 38.0 35.0 40.0 30.0 41.0 31 36.12412812499433 38.0 35.0 40.0 30.0 41.0 32 36.05037035960928 38.0 35.0 40.0 30.0 41.0 33 35.878479555314236 38.0 35.0 40.0 29.0 41.0 34 35.678686934904235 38.0 35.0 40.0 27.0 41.0 35 35.49774188686372 38.0 34.0 40.0 27.0 41.0 36 35.291985741291235 38.0 34.0 40.0 25.0 41.0 37 35.168870907113195 38.0 34.0 40.0 25.0 41.0 38 35.00991136429258 38.0 34.0 40.0 25.0 41.0 39 34.89358448902359 38.0 34.0 40.0 24.0 41.0 40 34.74365921468146 38.0 34.0 40.0 24.0 41.0 41 34.58850586818866 38.0 33.0 40.0 23.0 41.0 42 34.53547335026994 38.0 33.0 40.0 23.0 41.0 43 34.4455229070914 38.0 33.0 40.0 23.0 41.0 44 34.221300535155564 37.0 33.0 40.0 23.0 41.0 45 34.15210621031051 37.0 33.0 40.0 23.0 41.0 46 34.09210958794656 37.0 33.0 40.0 23.0 41.0 47 33.98852693301566 37.0 33.0 40.0 23.0 41.0 48 33.91215059172189 37.0 33.0 40.0 23.0 41.0 49 33.787713758055936 36.0 33.0 40.0 22.0 41.0 50 33.68259663943372 36.0 33.0 40.0 22.0 41.0 51 33.508361465167674 36.0 32.0 40.0 21.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 4.0 14 16.0 15 30.0 16 75.0 17 184.0 18 403.0 19 713.0 20 1247.0 21 1997.0 22 2928.0 23 4370.0 24 6164.0 25 8275.0 26 9687.0 27 10651.0 28 11696.0 29 13321.0 30 15944.0 31 20599.0 32 26687.0 33 37951.0 34 47437.0 35 54817.0 36 69475.0 37 102221.0 38 85107.0 39 18681.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.46082032973718 23.998830538914547 25.877413602430444 14.662935528917831 2 34.5888091290602 23.417005489566556 29.380893838719697 12.61329154265355 3 31.771570110463227 23.407744229417755 31.676596795603988 13.144088864515027 4 28.326926115119278 27.035434307702644 28.881148977357128 15.75649059982095 5 21.065371785116973 36.53004189358267 28.28824673449783 14.116339586802523 6 20.661871391967402 41.32701146398732 28.508519451370212 9.50259769267507 7 37.91977569591106 56.617170376315876 4.612470740773697 0.8505831869993699 8 86.65034747884891 3.5143758364643047 7.854274979525351 1.9810017051614275 9 81.50163161612622 5.326314145576114 9.664397355274652 3.507656883023021 10 42.95045589007066 26.914856332432024 16.38534832325793 13.749339454239387 11 36.26182853594004 24.752261291019664 22.901098821277653 16.084811351762635 12 32.383902840301374 22.677557424352756 28.54810679867292 16.390432936672955 13 23.887513823792723 30.36694565456226 28.46457386399749 17.280966657647532 14 19.387812544830854 33.59858066648386 30.204964398626426 16.808642390058854 15 18.13372896468191 24.43992075266806 39.042748887286834 18.383601395363193 16 20.119633689922114 20.66205298530365 38.023283897574096 21.19502942720014 17 20.390207760936004 21.046486078146877 30.18208363825881 28.381222522658305 18 23.24122314007565 24.053490133126072 31.94027031984034 20.76501640695793 19 27.583664589844208 25.389653901260438 26.21517720785718 20.81150430103817 20 27.85659937422936 25.376942367722876 26.254946148496135 20.511512109551628 21 24.530172640784773 26.70802152244221 28.67758284741983 20.084222989353183 22 23.49581699749946 23.805978415816053 27.458728374503572 25.239476212180918 23 21.76777480973558 28.087404504604297 27.29965261194775 22.845168073712365 24 21.56457186647079 26.15743052692938 33.3419892823613 18.936008324238536 25 22.83536203355482 25.244197638923442 30.731766667090383 21.188673660431355 26 20.029018615132898 28.677219660747326 27.414238007122087 23.87952371699768 27 20.54292775672304 27.901634521619595 30.007390848785416 21.548046872871954 28 19.787499477919155 27.166181509803316 33.17219951296667 19.87411949931085 29 20.13107407010592 25.903018262841826 32.29256139216715 21.6733462748851 30 22.28549741138699 26.786651437038866 31.11819728663237 19.809653864941772 31 27.832265867171742 25.266715212618557 26.180311287297002 20.720707632912703 32 27.04070051445392 25.769002380688637 26.78138523028759 20.408911874569853 33 26.28854091570256 25.388927527915435 26.204826387690876 22.117705168691128 34 21.412033464020006 26.713469322529743 28.94615939173496 22.928337821715296 35 22.416789393496416 25.424883008493122 29.046580506681728 23.111747091328734 36 27.781056546348974 26.657901761636953 25.13506004383663 20.425981648177437 37 21.958810999471563 30.209504232032703 26.53677900635758 21.294905762138153 38 22.45637674079912 31.34809445032605 24.117592580822656 22.077936228052174 39 21.974609619725392 28.320388755014246 25.32264596018384 24.382355665076513 40 23.599869979171245 25.960220163760873 27.1433007494357 23.296609107632186 41 20.875788342071 24.94656616080816 27.909806221750888 26.26783927536995 42 21.927940132308905 27.541353342497743 25.264354499247293 25.266352025946055 43 22.051060414287036 26.886890958649378 26.578363880359046 24.483684746704533 44 21.462879598170264 27.242087524356208 28.47111122410252 22.823921653371006 45 20.917191622736212 30.741572707247933 25.689827686083234 22.65140798393262 46 23.205449252834217 28.783451762454128 27.186519963463418 20.824579021248233 47 22.479983874511742 27.80339252670784 27.470713534696127 22.24591006408429 48 21.830242917405904 27.62179919045691 28.551738665397934 21.996219226739257 49 22.266974891089397 26.57872706703155 29.08834697401944 22.06595106785961 50 21.270027475071775 28.93435582487865 28.424260143349777 21.371356556699794 51 21.104595945747175 29.240885376470228 27.07774555504911 22.57677312273349 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 374.0 1 642.0 2 910.0 3 3610.5 4 6311.0 5 4588.0 6 2865.0 7 2846.5 8 2828.0 9 2849.0 10 2870.0 11 2884.5 12 2899.0 13 2787.0 14 2675.0 15 2593.5 16 2512.0 17 2400.5 18 2289.0 19 2382.0 20 2475.0 21 2641.0 22 2807.0 23 2958.0 24 3109.0 25 3596.0 26 4852.5 27 5622.0 28 6871.0 29 8120.0 30 9145.5 31 10171.0 32 12128.5 33 14086.0 34 15123.5 35 16161.0 36 17364.5 37 18568.0 38 21911.0 39 25254.0 40 29934.0 41 34614.0 42 36532.5 43 38451.0 44 38999.0 45 39547.0 46 41019.0 47 42491.0 48 41289.5 49 40088.0 50 39174.5 51 38261.0 52 35786.0 53 33311.0 54 31071.5 55 28832.0 56 27690.5 57 26549.0 58 24743.5 59 22938.0 60 20694.0 61 18450.0 62 16484.5 63 14519.0 64 12756.0 65 10993.0 66 9337.5 67 7682.0 68 6815.0 69 5948.0 70 5325.0 71 4702.0 72 3919.0 73 3136.0 74 2374.0 75 1178.0 76 744.0 77 566.0 78 388.0 79 319.0 80 250.0 81 173.0 82 96.0 83 70.5 84 45.0 85 37.5 86 30.0 87 20.0 88 10.0 89 6.5 90 3.0 91 1.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 550681.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.87335812112977 #Duplication Level Percentage of deduplicated Percentage of total 1 67.81039135792926 27.038280189486763 2 9.919200196690122 7.910236434356122 3 5.363221948188055 6.415490082696169 4 3.6119911878388438 5.760888726522524 5 2.6050472873845454 5.193599170618081 6 2.025117083969962 4.84489312358114 7 1.6314159617793553 4.553502302198892 8 1.234685403021972 3.9384842593301226 9 1.0373320105229633 3.7225719671484296 >10 4.71200341607949 27.757396822349783 >50 0.028854776213267683 0.7496466501913862 >100 0.019386802748573455 1.4128232659482094 >500 4.508558778738013E-4 0.10408762832218006 >1k 9.017117557476025E-4 0.5980993772502471 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1697 0.3081638916178332 No Hit CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1630 0.29599713808902073 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 579 0.10514254168929016 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007990106795041049 0.0 2 0.0 0.0 0.0 0.026694220428887142 0.0 3 0.0 0.0 0.0 0.035410700568931926 0.0 4 0.0 0.0 0.0 0.05211728750401775 0.0 5 0.0 0.0 0.0 0.09806040157550379 0.0 6 0.0 0.0 0.0 0.1599837292370719 0.0 7 0.0 0.0 0.0 0.20374772327354676 0.0 8 0.0 0.0 0.0 0.5373346819665106 0.0 9 0.0 0.0 0.0 0.6987711578935899 0.0 10 0.0 0.0 0.0 0.9439221618323494 0.0 11 0.0 0.0 0.0 1.097186937628137 0.0 12 0.0 0.0 0.0 1.2580786335464633 0.0 13 0.0 0.0 0.0 1.329808001365582 0.0 14 0.0 0.0 0.0 1.3552310684407125 0.0 15 0.0 0.0 0.0 1.3926392957084046 0.0 16 0.0 0.0 0.0 1.4739931103488226 0.0 17 0.0 0.0 0.0 1.5555285183254914 0.0 18 0.0 0.0 0.0 1.6964449472562155 0.0 19 0.0 0.0 0.0 1.7512861348039972 0.0 20 0.0 0.0 0.0 1.822470722614363 0.0 21 0.0 0.0 0.0 1.9049140972722864 0.0 22 0.0 0.0 0.0 1.9849967585589479 0.0 23 0.0 0.0 0.0 2.0799700734181856 0.0 24 0.0 0.0 0.0 2.14498048779602 0.0 25 0.0 0.0 0.0 2.20345354206882 0.0 26 0.0 0.0 0.0 2.2653768697303884 0.0 27 0.0 0.0 0.0 2.334563930841994 0.0 28 0.0 0.0 0.0 2.4033878052810973 0.0 29 0.0 0.0 0.0 2.4834704665677587 0.0 30 0.0 0.0 0.0 2.5946055883533297 0.0 31 0.0 0.0 0.0 2.677412149683755 0.0 32 0.0 0.0 0.0 2.7605818976866825 0.0 33 0.0 0.0 0.0 2.8502890057946435 0.0 34 0.0 0.0 0.0 2.93727221385884 0.0 35 0.0 0.0 0.0 3.047862555635658 0.0 36 0.0 0.0 0.0 3.144107023848653 0.0 37 0.0 0.0 0.0 3.229637485222842 0.0 38 0.0 0.0 0.0 3.3536657338822295 0.0 39 0.0 0.0 0.0 3.5220027565868444 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 20 7.0300803E-4 45.000004 6 AGCGTAA 20 7.0300803E-4 45.000004 1 AAATCGT 20 7.0300803E-4 45.000004 12 TAACGCC 40 6.8030204E-9 45.000004 12 ATATACG 20 7.0300803E-4 45.000004 1 TTACGAG 20 7.0300803E-4 45.000004 1 ACGTATA 20 7.0300803E-4 45.000004 13 TAGCGAA 30 2.163435E-6 44.999996 1 CGTTAAG 60 0.0 44.999996 2 GAACGTT 30 2.163435E-6 44.999996 39 CGTTTTA 825 0.0 43.909092 1 CGGTCTA 135 0.0 43.333332 31 GGTATGC 70 0.0 41.785717 8 CGTTTTT 1215 0.0 41.296295 1 CGCAGTA 120 0.0 41.249996 37 AGGTACC 240 0.0 40.312496 7 ACGACGG 140 0.0 40.178574 27 ATAACGC 45 1.9252184E-8 40.000004 11 GGTTAAC 45 1.9252184E-8 40.000004 8 CAAGGAC 445 0.0 39.94382 5 >>END_MODULE