##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545721_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 299798 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.98304858604794 31.0 31.0 33.0 30.0 33.0 2 31.14042455253204 31.0 31.0 33.0 30.0 34.0 3 31.060177185971888 31.0 31.0 34.0 28.0 34.0 4 35.022658590117345 35.0 35.0 37.0 32.0 37.0 5 32.73347387240742 35.0 35.0 37.0 28.0 37.0 6 33.93663733580611 35.0 35.0 37.0 28.0 37.0 7 15.374405432991548 0.0 0.0 35.0 0.0 37.0 8 24.93621371723627 17.0 17.0 35.0 17.0 37.0 9 32.681922494479615 32.0 32.0 37.0 27.0 39.0 10 35.52733840786129 37.0 35.0 37.0 32.0 39.0 11 36.47776836403178 37.0 35.0 39.0 32.0 39.0 12 36.1469122542512 37.0 35.0 39.0 32.0 39.0 13 35.607722533172335 37.0 35.0 39.0 30.0 39.0 14 36.633002888611664 39.0 35.0 40.0 31.0 41.0 15 37.0942834842127 39.0 35.0 40.0 32.0 41.0 16 37.235685361476726 39.0 35.0 41.0 32.0 41.0 17 37.21136898845222 39.0 35.0 41.0 32.0 41.0 18 37.10916350342564 39.0 35.0 40.0 32.0 41.0 19 37.0239494593026 39.0 35.0 40.0 32.0 41.0 20 37.06825929459169 39.0 35.0 40.0 32.0 41.0 21 36.896400242830175 39.0 35.0 40.0 31.0 41.0 22 36.95171081861787 39.0 35.0 40.0 32.0 41.0 23 36.93462598149421 38.0 35.0 40.0 32.0 41.0 24 36.751976330729356 38.0 35.0 40.0 32.0 41.0 25 36.49498662432705 38.0 35.0 40.0 31.0 41.0 26 36.315338994923245 38.0 35.0 40.0 31.0 41.0 27 36.18235611978732 38.0 34.0 40.0 31.0 41.0 28 36.12966063816303 38.0 35.0 40.0 30.0 41.0 29 36.179304064736925 38.0 35.0 40.0 30.0 41.0 30 35.94743794154731 38.0 34.0 40.0 30.0 41.0 31 35.771706282230035 38.0 34.0 40.0 30.0 41.0 32 35.57051414619177 38.0 34.0 40.0 29.0 41.0 33 35.356646808851295 38.0 34.0 40.0 27.0 41.0 34 35.17148546688103 38.0 34.0 40.0 26.0 41.0 35 34.986717723267 38.0 34.0 40.0 25.0 41.0 36 34.76712653186479 38.0 34.0 40.0 24.0 41.0 37 34.56743207092776 37.0 33.0 40.0 23.0 41.0 38 34.51511017418395 37.0 33.0 40.0 23.0 41.0 39 34.45001967991781 37.0 33.0 40.0 23.0 41.0 40 34.27688643686749 37.0 33.0 40.0 23.0 41.0 41 34.192629704000694 37.0 33.0 40.0 23.0 41.0 42 34.120841366520125 37.0 33.0 40.0 23.0 41.0 43 34.02736175691632 37.0 33.0 40.0 23.0 41.0 44 33.791065984429515 36.0 33.0 40.0 22.0 41.0 45 33.698857230535225 36.0 33.0 40.0 22.0 41.0 46 33.697616395039326 36.0 33.0 40.0 22.0 41.0 47 33.66149207132803 36.0 33.0 40.0 22.0 41.0 48 33.661081795075354 36.0 33.0 40.0 22.0 41.0 49 33.58224871413418 36.0 33.0 40.0 21.0 41.0 50 33.415843334511905 35.0 32.0 40.0 20.0 41.0 51 33.19771646241803 35.0 32.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 5.0 14 8.0 15 17.0 16 58.0 17 121.0 18 260.0 19 455.0 20 739.0 21 1257.0 22 1845.0 23 2777.0 24 3838.0 25 4938.0 26 6030.0 27 6266.0 28 6855.0 29 7676.0 30 9253.0 31 11665.0 32 15679.0 33 24378.0 34 30321.0 35 30191.0 36 32840.0 37 49910.0 38 44437.0 39 7978.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.01855916316987 23.710298267500114 28.12727236339135 16.143870205938665 2 32.57660157839612 23.629910806609782 31.20868051154444 12.584807103449656 3 30.356773560864315 23.054189821146238 33.53524706635802 13.05378955163143 4 26.429128946824193 27.04220842033636 31.465853674807704 15.062808958031743 5 21.004476347407255 36.950213143516635 28.911467054483353 13.133843454592759 6 19.841026291035966 40.2954656135131 29.474846396573696 10.388661698877243 7 37.39084316773294 56.63380009206199 5.143796823194284 0.8315599170107872 8 86.4405366279962 3.517034803434312 8.286913188213397 1.7555153803561065 9 82.0689264104497 4.878284711705882 9.959039086318121 3.093749791526294 10 55.5370616214918 20.364045123716636 13.924709304264871 10.174183950526688 11 52.04337587308788 17.620864715575156 18.63588149353898 11.699877917797984 12 44.24245658743554 20.65991100674454 22.752319895396234 12.345312510423685 13 21.505813914702564 42.69341356513386 23.568536147672766 12.23223637249081 14 14.29729351096405 45.72645581358115 27.887444212436375 12.088806463018432 15 12.606154810906009 21.709284251395943 53.00468982448182 12.679871113216231 16 14.173877077232003 15.070147232469862 51.34623980146632 19.409735888831815 17 15.112842647382571 15.842667396046672 30.17064823647923 38.87384172009153 18 20.90641031627963 21.085197366226595 37.416193570337356 20.592198747156417 19 30.581925162943048 21.755315245598702 26.787703720505142 20.87505587095311 20 32.87046611384999 21.854381950513346 25.057538742753454 20.217613192883206 21 21.867390709744562 27.335072282003214 29.34909505733861 21.448441950913615 22 22.525166945743464 23.212629837423865 26.0071781666322 28.255025050200466 23 19.44075677622933 30.03055390629691 25.114243590684392 25.41444572678937 24 19.12054116438402 23.274004496360885 41.04597095377554 16.559483385479556 25 17.07182836443205 22.82937177699651 39.76110581124624 20.3376940473252 26 16.48309861973729 34.18134877484172 28.32507221529163 21.010480390129356 27 17.24661271923095 33.88648356560084 30.621618556494706 18.245285158673507 28 14.10249568042482 28.306726529196325 41.468922407754555 16.1218553826243 29 14.984422844715443 23.999826549876918 40.333491217419734 20.682259387987912 30 18.469769644894228 29.56023722639911 32.981540904208835 18.988452224497827 31 30.75937798117399 24.878084576948478 25.30203670471451 19.06050073716302 32 31.57892981274058 25.252003015363677 27.170961780932494 15.99810539096325 33 28.715001434299094 26.20931427160955 25.241662719564506 19.834021574526847 34 19.69059166505447 27.369095190761776 28.213330309074774 24.726982835108974 35 20.482124630584593 24.55119780652306 31.798744487955222 23.167933074937125 36 32.93384212036104 23.365065810979395 25.36974896430263 18.331343104356932 37 20.19359702199481 33.19168239948232 28.558562765595504 18.05615781292737 38 21.167586174690957 33.95486294104697 22.69227946817524 22.18527141608683 39 20.93076004509703 31.24904102095411 26.967157886310115 20.853041047638744 40 23.899425613246255 24.986824461804282 26.023856063082473 25.08989386186699 41 17.553486013916036 23.80469516140868 26.986837804121443 31.65498102055384 42 22.135904842594012 25.319715274951797 24.18461764254598 28.359762239908203 43 22.673266666221924 25.411443705428322 25.660277920466445 26.25501170788331 44 19.43441917557822 29.782053249187783 29.30106271556181 21.482464859672177 45 16.7249281182663 38.56496707783241 23.130574586888507 21.57953021701279 46 22.71062515427054 32.24237653353258 26.75201302210155 18.29498529009533 47 22.909759237886842 27.229000860579454 26.16628529876784 23.694954602765865 48 23.31536567955757 23.1722693280142 31.36478562231903 22.14757937010921 49 21.384398828544555 23.273337380502873 33.52557388641685 21.81668990453572 50 20.24229647962962 33.166665554806904 26.219321009479717 20.371716956083763 51 19.658570103869938 34.71170588196052 23.524172943115033 22.10555107105451 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 192.0 1 277.0 2 362.0 3 1690.0 4 3018.0 5 2330.0 6 1642.0 7 1754.5 8 1867.0 9 1949.5 10 2032.0 11 2014.5 12 1997.0 13 1952.5 14 1908.0 15 1769.5 16 1631.0 17 1542.0 18 1453.0 19 1372.5 20 1292.0 21 1369.5 22 1447.0 23 1476.0 24 1505.0 25 1446.0 26 1705.0 27 2023.0 28 2696.5 29 3370.0 30 3873.0 31 4376.0 32 4567.5 33 4759.0 34 5415.5 35 6072.0 36 7350.5 37 8629.0 38 12532.5 39 16436.0 40 21576.5 41 26717.0 42 29275.5 43 31834.0 44 31025.0 45 30216.0 46 28886.5 47 27557.0 48 24962.5 49 22368.0 50 21264.5 51 20161.0 52 18343.5 53 16526.0 54 14770.0 55 13014.0 56 11802.0 57 10590.0 58 9951.0 59 9312.0 60 8350.5 61 7389.0 62 6390.5 63 5392.0 64 4585.5 65 3779.0 66 3113.0 67 2447.0 68 2116.5 69 1786.0 70 1581.5 71 1377.0 72 1109.0 73 841.0 74 697.0 75 404.5 76 256.0 77 184.5 78 113.0 79 102.5 80 92.0 81 70.0 82 48.0 83 34.0 84 20.0 85 13.5 86 7.0 87 4.0 88 1.0 89 1.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 299798.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.902807890646365 #Duplication Level Percentage of deduplicated Percentage of total 1 69.5248580618699 21.485133323104225 2 7.164907281480043 4.428315065477421 3 3.8868380718001854 3.6034263070467447 4 2.6757766120501696 3.307560424018839 5 2.1058653368736913 3.253857597448949 6 1.7518295447186063 3.248187112655855 7 1.4215400556958746 3.0750705475019844 8 1.2229346113161927 3.0233690685061276 9 1.0826155473522872 3.011027425132923 >10 9.053817757917233 48.542018292316826 >50 0.09606458994452001 1.837570630891467 >100 0.009714396735962697 0.4099426947477968 >500 0.0032381322453208993 0.7745215111508416 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 871 0.29052895616381696 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 737 0.2458321936770759 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 714 0.2381603613099487 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006004042722099547 0.0 2 0.0 0.0 0.0 0.03368935082955857 0.0 3 0.0 0.0 0.0 0.04102762526768024 0.0 4 0.0 0.0 0.0 0.06837937544613373 0.0 5 0.0 0.0 0.0 0.12741912888011261 0.0 6 0.0 0.0 0.0 0.1797877237339809 0.0 7 0.0 0.0 0.0 0.21848044349862242 0.0 8 0.0 0.0 0.0 0.5110107472364726 0.0 9 0.0 0.0 0.0 0.6511050774187953 0.0 10 0.0 0.0 0.0 0.8962701552378601 0.0 11 0.0 0.0 0.0 1.036364485420183 0.0 12 0.0 0.0 0.0 1.1958051754848265 0.0 13 0.0 0.0 0.0 1.2571798344218441 0.0 14 0.0 0.0 0.0 1.2761926363751592 0.0 15 0.0 0.0 0.0 1.3182209354298562 0.0 16 0.0 0.0 0.0 1.3932714694561004 0.0 17 0.0 0.0 0.0 1.4843327840746103 0.0 18 0.0 0.0 0.0 1.6437734741392538 0.0 19 0.0 0.0 0.0 1.7038139013602491 0.0 20 0.0 0.0 0.0 1.7691912554453333 0.0 21 0.0 0.0 0.0 1.8472438108326272 0.0 22 0.0 0.0 0.0 1.9189587655688163 0.0 23 0.0 0.0 0.0 2.0160241229094256 0.0 24 0.0 0.0 0.0 2.080400803207493 0.0 25 0.0 0.0 0.0 2.1297673767003116 0.0 26 0.0 0.0 0.0 2.191475593566335 0.0 27 0.0 0.0 0.0 2.2391743774141255 0.0 28 0.0 0.0 0.0 2.291542972267994 0.0 29 0.0 0.0 0.0 2.346913588482912 0.0 30 0.0 0.0 0.0 2.4309701865923055 0.0 31 0.0 0.0 0.0 2.5153603426307045 0.0 32 0.0 0.0 0.0 2.583406160147833 0.0 33 0.0 0.0 0.0 2.6494506300909277 0.0 34 0.0 0.0 0.0 2.7258353958331942 0.0 35 0.0 0.0 0.0 2.8335746069019807 0.0 36 0.0 0.0 0.0 2.9096258147152416 0.0 37 0.0 0.0 0.0 2.986010580457508 0.0 38 0.0 0.0 0.0 3.063396019986791 0.0 39 0.0 0.0 0.0 3.1357780905809913 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAGGTAC 65 0.0 45.000004 6 TAGGCGA 65 0.0 45.000004 6 CGGGTAA 20 7.0249353E-4 45.0 28 CATGCCG 20 7.0249353E-4 45.0 12 AACCCGG 25 3.883884E-5 45.0 38 CACGCTC 20 7.0249353E-4 45.0 25 GTTAGGC 40 6.7866495E-9 45.0 4 TGAGTTA 25 3.883884E-5 45.0 1 CACTGTA 20 7.0249353E-4 45.0 43 AGGCGAT 215 0.0 45.0 7 GCGTTCG 25 3.883884E-5 45.0 44 CGTTCGG 25 3.883884E-5 45.0 45 CAGGGTT 20 7.0249353E-4 45.0 45 AACATAG 20 7.0249353E-4 45.0 2 CAAGGCA 20 7.0249353E-4 45.0 5 CGAATAC 20 7.0249353E-4 45.0 40 ACGCTCA 20 7.0249353E-4 45.0 26 GCGATAT 25 3.883884E-5 45.0 9 GTATCAC 20 7.0249353E-4 45.0 9 CGATGTT 20 7.0249353E-4 45.0 10 >>END_MODULE