##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545720_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 993183 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.514481218466283 31.0 31.0 33.0 30.0 34.0 2 31.711005927407136 31.0 31.0 34.0 30.0 34.0 3 31.771000913225457 31.0 31.0 34.0 30.0 34.0 4 35.675157549011615 37.0 35.0 37.0 35.0 37.0 5 27.148094560619747 35.0 26.0 37.0 0.0 37.0 6 31.36097577183661 35.0 26.0 37.0 17.0 37.0 7 14.942632928674776 0.0 0.0 32.0 0.0 37.0 8 25.071725955840968 17.0 17.0 35.0 17.0 37.0 9 33.229432038204436 32.0 32.0 37.0 28.0 39.0 10 36.011247675403226 37.0 35.0 39.0 32.0 39.0 11 37.00764310303338 39.0 37.0 39.0 34.0 39.0 12 36.99552348358762 39.0 35.0 39.0 33.0 39.0 13 36.515187029983394 39.0 35.0 39.0 33.0 39.0 14 37.820187216253196 40.0 36.0 41.0 33.0 41.0 15 38.100754845783705 40.0 36.0 41.0 33.0 41.0 16 38.16936053073804 40.0 36.0 41.0 33.0 41.0 17 38.184851130154264 40.0 36.0 41.0 34.0 41.0 18 38.17451768707277 40.0 36.0 41.0 34.0 41.0 19 38.10868792558874 40.0 36.0 41.0 34.0 41.0 20 38.12705714858188 40.0 36.0 41.0 34.0 41.0 21 37.989763215842395 40.0 36.0 41.0 34.0 41.0 22 37.914437721950534 40.0 35.0 41.0 34.0 41.0 23 37.82113568194381 40.0 35.0 41.0 33.0 41.0 24 37.67759919370348 40.0 35.0 41.0 33.0 41.0 25 37.474781586072254 39.0 35.0 41.0 33.0 41.0 26 37.2258586786121 39.0 35.0 40.0 33.0 41.0 27 37.02703630650142 39.0 35.0 40.0 32.0 41.0 28 37.054000118809924 39.0 35.0 40.0 32.0 41.0 29 37.00631303596618 39.0 35.0 40.0 32.0 41.0 30 36.810655236748914 38.0 35.0 40.0 32.0 41.0 31 36.598748669681214 38.0 35.0 40.0 31.0 41.0 32 36.36496395931062 38.0 35.0 40.0 31.0 41.0 33 36.17668546481364 38.0 35.0 40.0 30.0 41.0 34 35.93176584778435 38.0 35.0 40.0 30.0 41.0 35 35.77072906000203 38.0 35.0 40.0 30.0 41.0 36 35.559309815008916 38.0 35.0 40.0 29.0 41.0 37 35.43242987445415 38.0 35.0 40.0 28.0 41.0 38 35.273914273603154 38.0 34.0 40.0 28.0 41.0 39 35.2164132893938 38.0 34.0 40.0 27.0 41.0 40 34.976823002407414 38.0 34.0 40.0 27.0 41.0 41 34.810658257340286 37.0 34.0 40.0 26.0 40.0 42 34.80279163054543 37.0 34.0 40.0 26.0 41.0 43 34.690569613052176 37.0 34.0 40.0 26.0 41.0 44 34.45505108323441 37.0 34.0 40.0 25.0 40.0 45 34.18470815549602 36.0 33.0 39.0 24.0 40.0 46 34.16822277465482 36.0 33.0 39.0 24.0 40.0 47 34.00616804758035 36.0 33.0 39.0 24.0 40.0 48 33.952791177456724 36.0 33.0 39.0 24.0 40.0 49 33.83920083207224 36.0 33.0 39.0 24.0 40.0 50 33.92018892792164 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 5.0 14 4.0 15 15.0 16 43.0 17 178.0 18 376.0 19 777.0 20 1335.0 21 2319.0 22 3741.0 23 5534.0 24 8325.0 25 12206.0 26 15296.0 27 16910.0 28 17519.0 29 19862.0 30 24557.0 31 32552.0 32 44882.0 33 82013.0 34 83114.0 35 103642.0 36 134846.0 37 248535.0 38 107727.0 39 26867.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.66628607215387 23.701472941039064 28.139023724731494 15.49321726207557 2 33.337260102116126 24.571000510479944 29.767726592178885 12.32401279522505 3 29.88824818789689 23.517820985659238 33.51849558439885 13.075435242045023 4 26.594897415682713 26.988983903268583 31.39753700979578 15.018581671252932 5 17.433846531807333 47.687384902882954 23.618104619189012 11.260663946120705 6 19.853742965797842 41.01137454024082 28.67850134365973 10.456381150301606 7 39.2266077852722 55.91708678058323 3.894146395981405 0.9621590381631583 8 88.1155839356896 2.7458182429622737 7.440824097875215 1.6977737234729149 9 84.18237122463836 3.980535309202836 9.321947717590817 2.515145748567988 10 48.904381166411426 23.367798280880763 15.497546776374547 12.230273776333265 11 42.80782091517877 20.639801527009624 21.630555496821835 14.921822060989767 12 38.76204083235416 20.70111953184861 25.563868894252117 14.972970741545113 13 22.174362630049043 36.34154028008937 25.650861925747826 15.833235164113763 14 16.495751538236156 38.507203606988845 28.998885401783962 15.99815945299104 15 15.20837549575456 22.76841226642019 45.52756138596815 16.49565085185711 16 17.232775832852557 17.635118603520198 43.975380166595684 21.156725397031565 17 17.25855154588832 18.00282525979603 30.701592757830127 34.03703043648552 18 21.688349478394215 22.14758005322282 34.370906469401916 21.793163998981054 19 28.322071561837042 24.284346389336104 25.90348405077413 21.490097998052725 20 30.248201992986186 22.162683010079714 25.796857175364458 21.792257821569642 21 23.12141871135531 26.32727302017856 28.832450817220995 21.71885745124514 22 22.564119603335943 22.71253132604968 26.316600263999685 28.40674880661469 23 20.48031430260083 27.91529859049138 25.92986388208417 25.67452322482362 24 20.54253848485123 23.13058117184849 38.25639383678537 18.070486506514914 25 20.00527596626201 23.336384130618427 34.69682827837367 21.961511624745896 26 18.200170562726104 30.868631460667366 27.952049118843153 22.979148857763374 27 18.614998444395443 30.85967037293228 29.146995065360564 21.378336117311715 28 17.24727467143517 26.299483579561873 37.215397363829226 19.23784438517373 29 17.762889618529513 23.48942742676828 36.36036863297096 22.387314321731242 30 20.526932096099106 27.36454409711 32.155202012116604 19.953321794674295 31 28.596542631116318 25.792527661065485 25.91234445213017 19.698585255688027 32 29.207104833650998 25.28748478377097 26.602650266869247 18.902760115708787 33 27.759838821244426 26.081296196169284 24.99186957489204 21.16699540769425 34 20.6217786651604 26.65158384708558 28.0641130587213 24.662524429032718 35 21.32164968590884 24.74186529572093 30.75626546165208 23.18021955671815 36 29.066143902986656 25.47939302223256 25.380921743525615 20.073541331255164 37 21.107691130436184 30.917766413641797 27.732250753385827 20.24229170253619 38 22.19943353843149 30.480284096687114 25.059933567127107 22.26034879775429 39 21.416999686865363 29.835387838897766 25.993598360020258 22.754014114216613 40 23.83941328033202 24.828354895321407 27.354978891100636 23.97725293324594 41 20.039408648758585 23.337390994408885 27.58011363464739 29.043086722185134 42 22.549822137511416 26.060353429327726 24.15939459294007 27.230429840220786 43 22.47058195720225 25.805314831204317 26.121671434166714 25.602431777426716 44 21.40380977121034 28.682327426063477 27.69197620176745 22.221886600958733 45 19.021267983845878 33.94147906277091 24.14378820418795 22.893464749195264 46 22.40251796496718 29.99125035366091 27.018082266812865 20.588149414559048 47 22.59321796688022 27.63357810192079 26.661451112232086 23.111752818966895 48 22.119790612606135 25.020565192920134 29.548733717753926 23.310910476719798 49 21.3338327377734 24.86611228746364 31.19183473740489 22.608220237358072 50 20.23846562013244 29.978966615417303 27.80122092303231 21.981346841417945 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 519.0 1 936.5 2 1354.0 3 6120.0 4 10886.0 5 8230.5 6 5575.0 7 5612.5 8 5650.0 9 5931.0 10 6212.0 11 6037.5 12 5863.0 13 5638.5 14 5414.0 15 5088.5 16 4763.0 17 4528.5 18 4294.0 19 4072.0 20 3850.0 21 3941.5 22 4033.0 23 4368.5 24 4704.0 25 5998.5 26 7293.0 27 8214.0 28 9135.0 29 10943.0 30 12751.0 31 15167.0 32 17583.0 33 19996.5 34 22410.0 35 24223.0 36 26036.0 37 29835.0 38 33634.0 39 45514.5 40 57395.0 41 69317.5 42 81240.0 43 84262.5 44 87285.0 45 88151.0 46 89017.0 47 87017.0 48 85017.0 49 80605.0 50 76193.0 51 67802.5 52 59412.0 53 55054.5 54 50697.0 55 48108.0 56 45519.0 57 43379.5 58 41240.0 59 38551.0 60 35862.0 61 31765.5 62 27669.0 63 23802.0 64 19935.0 65 16975.5 66 14016.0 67 12531.0 68 11046.0 69 9831.5 70 8617.0 71 6902.5 72 5188.0 73 3939.0 74 2690.0 75 2117.0 76 1544.0 77 1214.0 78 884.0 79 649.5 80 415.0 81 303.0 82 191.0 83 139.0 84 87.0 85 63.0 86 39.0 87 26.5 88 14.0 89 11.5 90 9.0 91 5.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 993183.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.652534805346896 #Duplication Level Percentage of deduplicated Percentage of total 1 70.5768110734502 16.69320480365173 2 6.604057440763854 3.124053969483544 3 3.2772870889989663 2.325484408189862 4 2.2317908440772016 2.111500424711622 5 1.7503842520083437 2.070051222167922 6 1.4042475502867324 1.9928408435088034 7 1.192370974467249 1.9741817182130403 8 0.9806117078396277 1.8555162040165964 9 0.9123677098149535 1.9421828110505543 >10 10.283003084220537 51.8925210743292 >50 0.7192736027245025 10.718075500038521 >100 0.06593728309171586 2.434378646005214 >500 0.0 0.0 >1k 0.0018573882561046722 0.866008374633481 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3415 0.3438439844419407 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1594 0.16049408819925431 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1490 0.15002270477847487 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1386 0.1395513213576954 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006645301017033115 0.0 2 0.0 0.0 0.0 0.02708463596336224 0.0 3 0.0 0.0 0.0 0.03735464662604978 0.0 4 0.0 0.0 0.0 0.05477339020100022 0.0 5 0.0 0.0 0.0 0.09474588268224486 0.0 6 0.0 0.0 0.0 0.17559704505614776 0.0 7 0.0 0.0 0.0 0.22755121664386121 0.0 8 0.0 0.0 0.0 0.5236698574180186 0.0 9 0.0 0.0 0.0 0.6507360677740155 0.0 10 0.0 0.0 0.0 0.8478799979459979 0.0 11 0.0 0.0 0.0 1.0103878137261713 0.0 12 0.0 0.0 0.0 1.1576919862704054 0.0 13 0.0 0.0 0.0 1.2152845950846924 0.0 14 0.0 0.0 0.0 1.2341129479662862 0.0 15 0.0 0.0 0.0 1.2676415121885896 0.0 16 0.0 0.0 0.0 1.3435590419892407 0.0 17 0.0 0.0 0.0 1.4272294229764304 0.0 18 0.0 0.0 0.0 1.5711102586331018 0.0 19 0.0 0.0 0.0 1.6264877671083777 0.0 20 0.0 0.0 0.0 1.69042361780256 0.0 21 0.0 0.0 0.0 1.7704692891440954 0.0 22 0.0 0.0 0.0 1.8554485930588824 0.0 23 0.0 0.0 0.0 1.957947326927666 0.0 24 0.0 0.0 0.0 2.035576525172098 0.0 25 0.0 0.0 0.0 2.091356779163558 0.0 26 0.0 0.0 0.0 2.1482445833245234 0.0 27 0.0 0.0 0.0 2.212885238672027 0.0 28 0.0 0.0 0.0 2.277727266777623 0.0 29 0.0 0.0 0.0 2.35424891485255 0.0 30 0.0 0.0 0.0 2.4472831290910135 0.0 31 0.0 0.0 0.0 2.531759001110571 0.0 32 0.0 0.0 0.0 2.6110998677987842 0.0 33 0.0 0.0 0.0 2.687722202252757 0.0 34 0.0 0.0 0.0 2.7716946423770845 0.0 35 0.0 0.0 0.0 2.885168191561877 0.0 36 0.0 0.0 0.0 2.9768934828727436 0.0 37 0.0 0.0 0.0 3.0625775914408524 0.0 38 0.0 0.0 0.0 3.1635660296239463 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAT 20 7.855964E-4 44.0 43 CGTATGG 75 0.0 44.0 2 CAACGGC 30 2.5273675E-6 44.0 36 CGCATAT 25 4.4424025E-5 44.0 17 TACGGGT 50 2.7284841E-11 44.0 4 TACGATT 20 7.855964E-4 44.0 35 TCCGTGA 20 7.855964E-4 44.0 33 CGTTTTA 2305 0.0 43.427334 1 TTTACGG 145 0.0 42.482758 2 TAGGCGA 265 0.0 42.339622 6 TTACGGG 250 0.0 42.24 3 CGGTCTA 220 0.0 42.0 31 ACGGTCT 220 0.0 42.0 30 CGCATCG 105 0.0 41.904762 21 AGGCGAT 885 0.0 41.762714 7 CGTTATT 1165 0.0 41.356224 1 ACGGGTA 140 0.0 40.857143 5 AATAGGC 195 0.0 40.615387 4 TATACGG 60 3.6379788E-12 40.333332 2 CGACGGT 230 0.0 40.17391 28 >>END_MODULE