SRR1545719_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545719_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	382149
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	874	0.22870660396860912	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	816	0.21352927784712245	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	621	0.16250206071453804	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTACG	20	7.027368E-4	45.000004	7
CTATCGA	20	7.027368E-4	45.000004	38
CGCATCG	30	2.1616834E-6	45.000004	21
GTTAACG	20	7.027368E-4	45.000004	1
TTAACGG	30	2.1616834E-6	45.000004	2
TCGTACA	30	2.1616834E-6	45.000004	34
CTCGATA	20	7.027368E-4	45.000004	1
CGGTAAT	20	7.027368E-4	45.000004	25
TCTATCG	20	7.027368E-4	45.000004	37
TCTTCAC	25	3.885902E-5	45.0	37
GTTAGGC	50	2.1827873E-11	45.0	4
CGATTGT	25	3.885902E-5	45.0	10
TCGATAG	45	3.8380676E-10	45.0	2
AGTATGA	25	3.885902E-5	45.0	1
GCCGATG	25	3.885902E-5	45.0	9
TGATTCG	25	3.885902E-5	45.0	15
CATCGTT	25	3.885902E-5	45.0	36
AGGATCG	25	3.885902E-5	45.0	7
TAGGACA	25	3.885902E-5	45.0	6
ATCGCGA	25	3.885902E-5	45.0	1