##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545719_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 382149 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.98729553132417 31.0 31.0 33.0 30.0 33.0 2 31.144561414526795 31.0 31.0 33.0 30.0 34.0 3 31.099995028117306 31.0 31.0 34.0 28.0 34.0 4 35.08300165642197 35.0 35.0 37.0 32.0 37.0 5 32.76831026641441 35.0 35.0 37.0 28.0 37.0 6 33.96832387367231 35.0 35.0 37.0 28.0 37.0 7 15.276779476068235 0.0 0.0 35.0 0.0 37.0 8 24.889106081659246 17.0 17.0 35.0 17.0 37.0 9 32.71588307178614 32.0 32.0 37.0 27.0 39.0 10 35.44123365493564 37.0 34.0 37.0 32.0 39.0 11 36.43796529625879 37.0 35.0 39.0 32.0 39.0 12 36.289405441333095 37.0 35.0 39.0 32.0 39.0 13 35.9761846818911 37.0 35.0 39.0 31.0 39.0 14 36.99307076559143 39.0 35.0 40.0 31.0 41.0 15 37.3507218388639 39.0 36.0 41.0 32.0 41.0 16 37.40368285668679 39.0 35.0 41.0 32.0 41.0 17 37.35575914106801 39.0 35.0 41.0 32.0 41.0 18 37.28454869697422 39.0 35.0 40.0 32.0 41.0 19 37.22294707038354 39.0 36.0 40.0 32.0 41.0 20 37.316742945814326 39.0 35.0 40.0 32.0 41.0 21 37.17096211163708 39.0 35.0 40.0 32.0 41.0 22 37.225105914185306 39.0 35.0 41.0 32.0 41.0 23 37.22168054868651 39.0 35.0 41.0 32.0 41.0 24 37.02774310543793 39.0 35.0 40.0 32.0 41.0 25 36.76482994852793 38.0 35.0 40.0 31.0 41.0 26 36.64263938934813 38.0 35.0 40.0 31.0 41.0 27 36.55170103807677 38.0 35.0 40.0 31.0 41.0 28 36.491376400304596 38.0 35.0 40.0 31.0 41.0 29 36.47388060677903 38.0 35.0 40.0 31.0 41.0 30 36.20998092367113 38.0 35.0 40.0 30.0 41.0 31 36.05431651005236 38.0 35.0 40.0 30.0 41.0 32 35.94929726363277 38.0 34.0 40.0 30.0 41.0 33 35.770042575016554 38.0 34.0 40.0 29.0 41.0 34 35.60674239629045 38.0 34.0 40.0 28.0 41.0 35 35.420532305462004 38.0 34.0 40.0 27.0 41.0 36 35.19965510834779 38.0 34.0 40.0 26.0 41.0 37 35.05509107704063 38.0 34.0 40.0 25.0 41.0 38 34.97841156198237 38.0 34.0 40.0 25.0 41.0 39 34.880619862933045 38.0 34.0 40.0 25.0 41.0 40 34.70380401361773 38.0 33.0 40.0 24.0 41.0 41 34.60116342055062 37.0 33.0 40.0 24.0 41.0 42 34.53731397962575 37.0 33.0 40.0 23.0 41.0 43 34.450839855658394 37.0 33.0 40.0 23.0 41.0 44 34.20145021967871 37.0 33.0 40.0 23.0 41.0 45 34.110101033889926 37.0 33.0 40.0 23.0 41.0 46 34.109357868266045 37.0 33.0 40.0 23.0 41.0 47 34.042211284080295 37.0 33.0 40.0 23.0 41.0 48 34.00057569168047 36.0 33.0 40.0 23.0 41.0 49 33.90952481885338 36.0 33.0 40.0 23.0 41.0 50 33.77796880274448 36.0 33.0 40.0 23.0 41.0 51 33.57788977597743 36.0 32.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 0.0 13 1.0 14 5.0 15 21.0 16 62.0 17 111.0 18 229.0 19 476.0 20 812.0 21 1338.0 22 2031.0 23 3034.0 24 4208.0 25 5662.0 26 6744.0 27 7298.0 28 8194.0 29 9174.0 30 11255.0 31 14539.0 32 19064.0 33 28313.0 34 35948.0 35 38147.0 36 45048.0 37 68416.0 38 59927.0 39 12090.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.40830147403238 24.375309107180705 28.14975310677249 15.066636312014422 2 32.96358226764953 24.373215682888087 30.339998272924955 12.323203776537424 3 30.42425860070287 23.22863595089873 33.13184124516877 13.21526420322963 4 26.963304888930757 27.57275303611942 30.250504384415507 15.21343769053432 5 21.235957702362168 36.11313911589459 28.64353956179396 14.007363619949286 6 19.830223289868613 41.7674781302581 28.197901865502722 10.204396714370572 7 38.266226000853074 56.82704913528492 4.1735030053722495 0.7332218584897514 8 88.64212650039644 2.987578143603673 6.786619878633726 1.583675477366158 9 84.53011783361987 4.122475788239665 8.665991537332298 2.6814148408081664 10 49.00837108039011 23.960026063132442 14.985777798712022 12.045825057765427 11 43.205398941250664 21.016409829673766 20.951251998566004 14.826939230509565 12 39.10909095666874 21.120557688231553 25.05541032424525 14.714941030854456 13 22.315117925207183 36.99080725057504 24.972981742723388 15.721093081494391 14 16.360110846816294 39.33910595082023 28.462720038519006 15.838063163844469 15 15.180727935962151 23.044414613148277 45.39904592187864 16.375811529010935 16 17.117930440744317 17.851937333343802 43.846248452828604 21.183883773083274 17 17.208471041400085 18.244454388209835 30.23689712651348 34.310177443876604 18 21.83938725470955 22.427377802898867 34.183786952209736 21.549447990181843 19 28.871461131652836 24.55011003561438 25.251407173641695 21.327021659091088 20 30.761823267887657 22.464274406056276 25.251407173641695 21.522495152414372 21 23.04781642762378 26.920913047005225 28.419804840520317 21.61146568485067 22 22.177475277967496 23.009873112320065 25.838351009684708 28.974300600027735 23 20.367709976998498 28.49124294450594 25.524599043828456 25.616448034667105 24 20.356196143389095 23.436408311941154 38.405177038275646 17.8022185063941 25 20.017846442094577 23.68918929527488 34.60037838644089 21.692585876189654 26 18.1350729689205 31.568053298582488 27.409465941295146 22.88740779120186 27 18.39256415691262 31.743900939162472 28.705033900389637 21.15850100353527 28 17.189630222766514 26.894221887274334 36.97877006089248 18.937377829066673 29 17.579007141193618 23.97232493085158 36.157624382112736 22.29104354584207 30 20.607668736539935 27.97652224655828 31.827637910867228 19.588171106034558 31 29.14125118736409 26.239765117794366 25.314994936529995 19.30398875831155 32 29.823707506757835 25.29249062538434 26.37819279914379 18.505609068714037 33 28.245527268159805 26.089823602835544 24.66236991330607 21.00227921569859 34 20.484680059348577 26.62809532407516 27.724526297334286 25.162698319241972 35 21.246948179898418 24.71470552062154 30.827242777031994 23.211103522448052 36 29.485619483499892 25.671923778421508 25.167670201936943 19.67478653614166 37 20.89629961088476 31.743639261125896 27.484305859756276 19.87575526823307 38 21.817144621600477 31.182601550704042 24.849469709458877 22.150784118236604 39 21.38328243695522 30.31199872301118 25.70620360121314 22.59851523882046 40 24.032249201227792 24.869880596311912 27.207712175094006 23.89015802736629 41 19.71927180235981 23.587919895119445 27.39219519088104 29.300613111639702 42 22.36091158160822 26.08040319351876 23.956885926693513 27.601799298179508 43 22.173288429382257 25.549458457303302 26.286867164378293 25.990385948936144 44 20.97846651437005 28.646941376269464 28.153939955357725 22.220652154002757 45 19.01012432323518 34.65297567179294 23.914494084767984 22.4224059202039 46 22.220652154002757 30.666310784536922 26.61187128580737 20.50116577565295 47 22.437844924361965 27.856412027769274 26.243428610306452 23.462314437562313 48 21.947460283815996 25.31420990242026 29.83495966233066 22.90337015143308 49 21.165304632486283 25.1046057951218 31.426485480794142 22.30360409159778 50 20.160722650065814 30.833261371873277 27.49058613263413 21.515429845426784 51 20.199712677515837 31.39220565800251 25.918424488877374 22.48965717560428 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 200.0 1 358.5 2 517.0 3 1972.0 4 3427.0 5 2664.5 6 1902.0 7 1937.0 8 1972.0 9 1995.5 10 2019.0 11 1993.5 12 1968.0 13 1909.0 14 1850.0 15 1728.0 16 1606.0 17 1588.0 18 1570.0 19 1481.5 20 1393.0 21 1418.5 22 1444.0 23 1597.0 24 1750.0 25 2230.0 26 3079.5 27 3449.0 28 3865.5 29 4282.0 30 5106.0 31 5930.0 32 7173.0 33 8416.0 34 9168.0 35 9920.0 36 11163.0 37 12406.0 38 15983.0 39 19560.0 40 24141.0 41 28722.0 42 30857.0 43 32992.0 44 33236.0 45 33480.0 46 32861.0 47 32242.0 48 30763.5 49 29285.0 50 27406.5 51 25528.0 52 23155.0 53 20782.0 54 19691.5 55 18601.0 56 17504.0 57 16407.0 58 15436.0 59 14465.0 60 12967.5 61 11470.0 62 10070.0 63 8670.0 64 7465.5 65 6261.0 66 5468.5 67 4676.0 68 4202.5 69 3729.0 70 3191.5 71 2654.0 72 2239.5 73 1825.0 74 1442.5 75 754.5 76 449.0 77 361.5 78 274.0 79 208.0 80 142.0 81 110.5 82 79.0 83 56.5 84 34.0 85 27.0 86 20.0 87 14.5 88 9.0 89 5.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 382149.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.12324033882611 #Duplication Level Percentage of deduplicated Percentage of total 1 67.57299555206578 23.058095676375682 2 8.598020734910284 5.867846559511078 3 4.724553344550163 4.836512078090697 4 3.2579546909616264 4.4468788373075805 5 2.407955910992637 4.108362913804936 6 2.0081713270540757 4.111518770076335 7 1.5922334308078496 3.8032514824478927 8 1.3378841800916315 3.6522354738224045 9 1.1403231136286058 3.5020367703240693 >10 7.295120003995215 40.2760909734768 >50 0.04954354366161891 1.1022622334368606 >100 0.012957542188423408 0.6338397977549857 >500 0.002286625092074719 0.6010684335706902 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 874 0.22870660396860912 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 816 0.21352927784712245 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 621 0.16250206071453804 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.006018594841279187 0.0 2 0.0 0.0 0.0 0.024859413474848817 0.0 3 0.0 0.0 0.0 0.03454150082821099 0.0 4 0.0 0.0 0.0 0.05364399749835797 0.0 5 0.0 0.0 0.0 0.0921106688752293 0.0 6 0.0 0.0 0.0 0.14758641262962877 0.0 7 0.0 0.0 0.0 0.17924945505548884 0.0 8 0.0 0.0 0.0 0.41135787349960357 0.0 9 0.0 0.0 0.0 0.5223093610084025 0.0 10 0.0 0.0 0.0 0.6874282020887141 0.0 11 0.0 0.0 0.0 0.81748218626766 0.0 12 0.0 0.0 0.0 0.9368073709469343 0.0 13 0.0 0.0 0.0 0.9857411637868999 0.0 14 0.0 0.0 0.0 1.0045819824204696 0.0 15 0.0 0.0 0.0 1.030749786078205 0.0 16 0.0 0.0 0.0 1.0870105639423366 0.0 17 0.0 0.0 0.0 1.1602804141839962 0.0 18 0.0 0.0 0.0 1.3015865539357685 0.0 19 0.0 0.0 0.0 1.353398805178085 0.0 20 0.0 0.0 0.0 1.411491329298258 0.0 21 0.0 0.0 0.0 1.4740323800402462 0.0 22 0.0 0.0 0.0 1.5428537036600907 0.0 23 0.0 0.0 0.0 1.6244972510722258 0.0 24 0.0 0.0 0.0 1.6875616578873684 0.0 25 0.0 0.0 0.0 1.7359720946541795 0.0 26 0.0 0.0 0.0 1.7924945505548884 0.0 27 0.0 0.0 0.0 1.8484936503824425 0.0 28 0.0 0.0 0.0 1.9086795987952343 0.0 29 0.0 0.0 0.0 1.973837429902996 0.0 30 0.0 0.0 0.0 2.0560043333882856 0.0 31 0.0 0.0 0.0 2.1321526420322963 0.0 32 0.0 0.0 0.0 2.200188931542409 0.0 33 0.0 0.0 0.0 2.265870118723325 0.0 34 0.0 0.0 0.0 2.3404483591478717 0.0 35 0.0 0.0 0.0 2.4500914564737837 0.0 36 0.0 0.0 0.0 2.5359218524711564 0.0 37 0.0 0.0 0.0 2.62070553632222 0.0 38 0.0 0.0 0.0 2.699470625332004 0.0 39 0.0 0.0 0.0 2.803880161926369 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACG 20 7.027368E-4 45.000004 7 CTATCGA 20 7.027368E-4 45.000004 38 CGCATCG 30 2.1616834E-6 45.000004 21 GTTAACG 20 7.027368E-4 45.000004 1 TTAACGG 30 2.1616834E-6 45.000004 2 TCGTACA 30 2.1616834E-6 45.000004 34 CTCGATA 20 7.027368E-4 45.000004 1 CGGTAAT 20 7.027368E-4 45.000004 25 TCTATCG 20 7.027368E-4 45.000004 37 TCTTCAC 25 3.885902E-5 45.0 37 GTTAGGC 50 2.1827873E-11 45.0 4 CGATTGT 25 3.885902E-5 45.0 10 TCGATAG 45 3.8380676E-10 45.0 2 AGTATGA 25 3.885902E-5 45.0 1 GCCGATG 25 3.885902E-5 45.0 9 TGATTCG 25 3.885902E-5 45.0 15 CATCGTT 25 3.885902E-5 45.0 36 AGGATCG 25 3.885902E-5 45.0 7 TAGGACA 25 3.885902E-5 45.0 6 ATCGCGA 25 3.885902E-5 45.0 1 >>END_MODULE