##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545717_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 610651 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.951584456588133 31.0 31.0 33.0 30.0 33.0 2 31.13153830911601 31.0 31.0 33.0 30.0 34.0 3 30.88442989530845 31.0 31.0 34.0 27.0 34.0 4 34.83340893570959 35.0 35.0 37.0 32.0 37.0 5 32.67289007960357 35.0 35.0 37.0 28.0 37.0 6 33.93273899494147 35.0 35.0 37.0 28.0 37.0 7 16.10279030084287 0.0 0.0 35.0 0.0 37.0 8 25.331203911890753 17.0 17.0 35.0 17.0 37.0 9 32.86625748586345 32.0 32.0 37.0 27.0 39.0 10 35.50163022741304 37.0 34.0 38.0 32.0 39.0 11 36.41904131819976 37.0 35.0 39.0 32.0 39.0 12 36.54454017106334 38.0 35.0 39.0 32.0 39.0 13 36.524324041064375 38.0 35.0 39.0 32.0 39.0 14 37.654691468613 39.0 36.0 40.0 33.0 41.0 15 37.82414013896645 40.0 37.0 41.0 33.0 41.0 16 37.75218250686562 40.0 36.0 41.0 33.0 41.0 17 37.63156860465307 40.0 36.0 41.0 32.0 41.0 18 37.50837876299228 39.0 36.0 40.0 32.0 41.0 19 37.39147237947699 39.0 36.0 40.0 32.0 41.0 20 37.40882271542993 39.0 35.0 40.0 32.0 41.0 21 37.30015016760801 39.0 35.0 40.0 32.0 41.0 22 37.248145012453925 39.0 35.0 40.0 32.0 41.0 23 37.14116901470725 39.0 35.0 40.0 32.0 41.0 24 36.86401397852456 38.0 35.0 40.0 32.0 41.0 25 36.60952982964083 38.0 35.0 40.0 31.0 41.0 26 36.48383282758892 38.0 35.0 40.0 31.0 41.0 27 36.41430702643572 38.0 35.0 40.0 31.0 41.0 28 36.26022064976558 38.0 35.0 40.0 30.0 41.0 29 36.1512369585901 38.0 35.0 40.0 30.0 41.0 30 35.8007339707951 38.0 34.0 40.0 29.0 41.0 31 35.58021521294487 38.0 34.0 40.0 27.0 41.0 32 35.270902692372566 38.0 34.0 40.0 25.0 41.0 33 34.77999217228826 38.0 34.0 40.0 23.0 41.0 34 34.309119284173775 38.0 33.0 40.0 20.0 41.0 35 33.923005120764564 38.0 33.0 40.0 17.0 41.0 36 33.6471224971383 38.0 33.0 40.0 15.0 41.0 37 33.52283710335363 38.0 33.0 40.0 15.0 41.0 38 33.36544605674927 38.0 33.0 40.0 15.0 41.0 39 33.20368754001877 38.0 32.0 40.0 12.0 41.0 40 33.069632244932045 37.0 32.0 40.0 12.0 41.0 41 32.85488437749222 37.0 32.0 40.0 10.0 41.0 42 32.778562550458446 37.0 31.0 40.0 10.0 41.0 43 32.68849146239014 37.0 31.0 40.0 10.0 41.0 44 32.46406376146113 37.0 31.0 40.0 10.0 41.0 45 32.40509718317009 37.0 31.0 40.0 10.0 41.0 46 32.35250740603061 36.0 31.0 40.0 10.0 41.0 47 32.25843403187746 36.0 31.0 40.0 10.0 41.0 48 32.17248641204223 36.0 30.0 40.0 10.0 41.0 49 32.04877745225996 36.0 30.0 40.0 10.0 41.0 50 31.96952268971966 36.0 30.0 40.0 10.0 40.0 51 31.84446107514767 35.0 30.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 6.0 14 11.0 15 46.0 16 124.0 17 276.0 18 641.0 19 1219.0 20 2043.0 21 3481.0 22 5386.0 23 8165.0 24 12122.0 25 16178.0 26 18487.0 27 17713.0 28 16034.0 29 15871.0 30 17376.0 31 21145.0 32 27101.0 33 36851.0 34 46426.0 35 56275.0 36 72156.0 37 106524.0 38 88169.0 39 20821.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.888183266710445 21.592366179700026 24.737534205298935 22.781916348290597 2 41.73316673517279 20.980560090788355 25.807703581915035 11.478569592123815 3 27.961143107929075 21.40043985844615 39.12562167260841 11.512795361016357 4 24.360886987821196 24.82596442157632 37.30019274511955 13.512955845482935 5 19.283846255881016 33.593656605819035 34.63369420503692 12.488802933263026 6 18.264442373794523 37.47590686005591 35.25991114400861 8.999739622140961 7 35.08681718362862 54.22196966843582 10.006534010424941 0.6846791375106239 8 79.17124511382116 2.754273717720924 16.479298322609807 1.5951828458481194 9 74.66245040129304 4.5025718454567345 17.862084889732433 2.9728928635177865 10 34.01386389279637 30.116220230540847 24.263613749916075 11.606302126746701 11 27.425157741492278 23.299724392492603 34.39902661258231 14.876091253432813 12 26.151271348118648 20.903429291035305 37.488352594198645 15.456946766647398 13 22.412310796183093 24.344674781503674 36.50088184576788 16.74213257654536 14 18.168479213167586 27.203590921819497 37.1577218411171 17.470208023895808 15 17.594010326684145 23.51965361556765 41.32458638403933 17.561749673708878 16 20.165692023758254 21.15185269491084 40.09065734765029 18.591797933680613 17 19.853402352571273 21.85127020180103 36.960227691430944 21.33509975419675 18 21.18591470414361 22.843981259344538 37.43594950307131 18.534154533440542 19 23.37505383598815 24.72656230809415 33.64949864980161 18.248885206116093 20 25.01265043371746 23.38111294339975 33.91495305829353 17.691283564589266 21 22.77700355849741 24.83284232728678 35.2623675389052 17.127786575310612 22 21.491326469620127 21.85913066547013 35.62427638700338 21.025266477906364 23 20.333381915365734 24.643208641269727 35.352599111440085 19.670810331924454 24 19.988831591203486 24.15061958467275 38.77419344273571 17.08635538138806 25 20.904903127973263 24.236429646393766 35.80506705139269 19.05360017424028 26 19.34705748455337 25.957216151287728 34.71082500478997 19.984901359368937 27 18.92472132199898 24.551503231796886 36.26719681127191 20.25657863493223 28 18.63126401168589 24.90538785656619 37.77771591301742 18.685632218730504 29 19.501482843719245 23.75170105346589 37.145767385953675 19.601048716861186 30 20.539555327019855 24.298985836427025 36.99068698814871 18.170771848404407 31 23.331166247169005 24.440310422811066 33.73252479730648 18.495998532713447 32 23.58794139369296 24.398387949909196 33.37045218954853 18.643218466849312 33 23.217025764307273 25.073569027152985 32.12669757357312 19.582707634966617 34 20.44211832945496 25.946080494423164 33.49736592587255 20.114435250249326 35 21.504591002061733 26.105091124062678 32.12096598548107 20.269351888394517 36 23.174284493106537 28.05006460318578 29.27547813726662 19.50017276644106 37 21.247160816898685 29.575322074310854 29.582855018660414 19.59466209013004 38 21.70437778698471 28.754886178848476 29.68847999921395 19.852256034952863 39 21.46086717290236 28.51776219149727 28.5272602517641 21.494110383836265 40 22.38938444381488 26.388559095129626 30.918970082747755 20.303086378307743 41 20.453581505639065 26.38986917240781 30.484679465029945 22.671869856923184 42 21.01363954206249 28.064475453245798 28.447509297454683 22.47437570723703 43 21.050976744490715 27.196385496789492 29.34343839607239 22.409199362647403 44 21.971142272754815 27.110411675408702 30.051862684250086 20.866583367586394 45 20.783884739401064 28.53086296427911 29.024107059515174 21.661145236804654 46 21.692914610800603 28.076921187388542 29.958519678179517 20.271644523631338 47 20.523998159341424 28.084290372078325 30.213493468445968 21.178218000134283 48 20.640758796759524 27.2332314202384 30.80908735104012 21.316922431961956 49 21.28662689490396 26.6040668073908 31.15494775248055 20.954358545224686 50 20.209252093257852 27.182957204688112 31.473787810058447 21.13400289199559 51 19.784787055126415 27.619540457642742 30.90390419404865 21.691768293182196 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 360.0 1 679.5 2 999.0 3 10331.0 4 19663.0 5 14210.0 6 8757.0 7 8627.0 8 8497.0 9 8400.0 10 8303.0 11 8262.5 12 8222.0 13 8008.0 14 7794.0 15 7334.0 16 6874.0 17 6677.5 18 6481.0 19 6049.5 20 5618.0 21 5538.0 22 5458.0 23 5507.5 24 5557.0 25 5871.5 26 6999.0 27 7812.0 28 9007.0 29 10202.0 30 11647.0 31 13092.0 32 15002.5 33 16913.0 34 18355.5 35 19798.0 36 21071.0 37 22344.0 38 24203.0 39 26062.0 40 28381.5 41 30701.0 42 32669.0 43 34637.0 44 36153.0 45 37669.0 46 39254.5 47 40840.0 48 40039.0 49 39238.0 50 37455.5 51 35673.0 52 33566.0 53 31459.0 54 30027.5 55 28596.0 56 27526.5 57 26457.0 58 24688.5 59 22920.0 60 20798.5 61 18677.0 62 16585.5 63 14494.0 64 12342.5 65 10191.0 66 8803.5 67 7416.0 68 6636.0 69 5856.0 70 5191.0 71 4526.0 72 3787.0 73 3048.0 74 2323.5 75 1209.5 76 820.0 77 639.0 78 458.0 79 341.5 80 225.0 81 157.0 82 89.0 83 59.5 84 30.0 85 25.5 86 21.0 87 14.5 88 8.0 89 8.0 90 8.0 91 5.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 610651.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.89469221063495 #Duplication Level Percentage of deduplicated Percentage of total 1 71.49351890432094 37.816276774992666 2 11.787903357195036 12.470350397750837 3 5.881261350904099 9.332625268991263 4 3.456982227482647 7.314240436013193 5 2.205689900078756 5.833464418838597 6 1.515290324387591 4.809048919094089 7 1.0357645246838119 3.8350512015091383 8 0.7087975304757334 2.9993301771337655 9 0.5248959975650294 2.498779101041678 >10 1.3579676122831903 9.740584857829324 >50 0.020231780037150267 0.7464321493785387 >100 0.011064247851598654 0.8614732574079313 >500 0.0 0.0 >1k 3.161213671878894E-4 0.8297030868113551 >5k 3.161213671878894E-4 0.9126399532076532 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5458 0.8938002230406565 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4962 0.8125754317932828 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007369184689781889 0.0 2 0.0 0.0 0.0 0.030786816037311 0.0 3 0.0 0.0 0.0 0.04814533997324167 0.0 4 0.0 0.0 0.0 0.0658313832287182 0.0 5 0.0 0.0 0.0 0.11807071469628315 0.0 6 0.0 0.0 0.0 0.21092244178753494 0.0 7 0.0 0.0 0.0 0.27691758467602606 0.0 8 0.0 0.0 0.0 0.6558574373905881 0.0 9 0.0 0.0 0.0 0.8900337508658792 0.0 10 0.0 0.0 0.0 1.1987207095378538 0.0 11 0.0 0.0 0.0 1.3552749442807757 0.0 12 0.0 0.0 0.0 1.5124842176627893 0.0 13 0.0 0.0 0.0 1.5999318759815344 0.0 14 0.0 0.0 0.0 1.6546276023456934 0.0 15 0.0 0.0 0.0 1.693438641711878 0.0 16 0.0 0.0 0.0 1.7500994839933122 0.0 17 0.0 0.0 0.0 1.8152758285829385 0.0 18 0.0 0.0 0.0 1.9184444142398849 0.0 19 0.0 0.0 0.0 1.9695374280890394 0.0 20 0.0 0.0 0.0 2.0240693947934254 0.0 21 0.0 0.0 0.0 2.084824228569183 0.0 22 0.0 0.0 0.0 2.1516381697565383 0.0 23 0.0 0.0 0.0 2.223692420056628 0.0 24 0.0 0.0 0.0 2.287886206687617 0.0 25 0.0 0.0 0.0 2.34225441373223 0.0 26 0.0 0.0 0.0 2.394166225880249 0.0 27 0.0 0.0 0.0 2.4596700897894213 0.0 28 0.0 0.0 0.0 2.5218987605031353 0.0 29 0.0 0.0 0.0 2.5875663840720806 0.0 30 0.0 0.0 0.0 2.693518883945167 0.0 31 9.825579586375851E-4 0.0 0.0 2.763935537647527 0.0 32 9.825579586375851E-4 0.0 0.0 2.84679792549263 0.0 33 9.825579586375851E-4 0.0 0.0 2.927367678100912 0.0 34 9.825579586375851E-4 0.0 0.0 3.004989756833281 0.0 35 9.825579586375851E-4 0.0 0.0 3.0996428401820353 0.0 36 9.825579586375851E-4 0.0 0.0 3.1839790649650945 0.0 37 9.825579586375851E-4 0.0 0.0 3.26585889485156 0.0 38 9.825579586375851E-4 0.0 0.0 3.372466433363738 0.0 39 9.825579586375851E-4 0.0 0.0 3.516247414644371 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAATCGT 20 7.030687E-4 45.0 12 CGCATCG 25 3.8886505E-5 45.0 21 GTTACGG 25 3.8886505E-5 45.0 2 TTGACGA 25 3.8886505E-5 45.0 1 GCGATAC 20 7.030687E-4 45.0 9 CACGTTA 25 3.8886505E-5 45.0 1 GACGATA 25 3.8886505E-5 45.0 1 GCGCAAA 30 2.1638243E-6 44.999996 1 GCGTAAA 30 2.1638243E-6 44.999996 1 TGCACGG 60 0.0 44.999996 2 CGTTTTA 3365 0.0 44.39822 1 CGTTTTT 4370 0.0 44.227688 1 CGTTATT 680 0.0 42.683823 1 GTTTTAT 3630 0.0 42.210743 2 AGGCGAT 475 0.0 41.684208 7 ACGGGAT 140 0.0 40.178574 5 CGGTCTA 135 0.0 40.0 31 TAACGGG 85 0.0 39.705883 3 GTTATTT 755 0.0 39.63576 2 CTCACGA 160 0.0 39.375 24 >>END_MODULE