##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545716_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1085503 Sequences flagged as poor quality 0 Sequence length 50 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.56158849860387 31.0 31.0 33.0 30.0 34.0 2 31.7455925962434 31.0 31.0 34.0 30.0 34.0 3 31.794238247153622 31.0 31.0 34.0 30.0 34.0 4 35.69063927045803 37.0 35.0 37.0 35.0 37.0 5 27.35992807021261 35.0 28.0 37.0 0.0 37.0 6 31.48548276697531 36.0 29.0 37.0 17.0 37.0 7 14.729854270324449 0.0 0.0 32.0 0.0 37.0 8 24.95002316898249 17.0 17.0 35.0 17.0 37.0 9 33.173187913805855 32.0 32.0 37.0 28.0 39.0 10 36.10260773116242 37.0 35.0 39.0 32.0 39.0 11 37.095058235675076 39.0 37.0 39.0 34.0 39.0 12 36.975640785884515 39.0 35.0 39.0 33.0 39.0 13 36.4184069505105 39.0 35.0 39.0 33.0 39.0 14 37.73557143554647 40.0 36.0 41.0 33.0 41.0 15 38.02549325059442 40.0 36.0 41.0 33.0 41.0 16 38.12388173961749 40.0 36.0 41.0 34.0 41.0 17 38.15410920098793 40.0 36.0 41.0 34.0 41.0 18 38.13880385406581 40.0 36.0 41.0 34.0 41.0 19 38.05529786651903 40.0 36.0 41.0 34.0 41.0 20 38.05015186508006 40.0 36.0 41.0 34.0 41.0 21 37.90373587175715 40.0 35.0 41.0 34.0 41.0 22 37.81708387724401 40.0 35.0 41.0 33.0 41.0 23 37.723208503339 39.0 35.0 41.0 33.0 41.0 24 37.58675747556663 39.0 35.0 41.0 33.0 41.0 25 37.4146566154124 39.0 35.0 41.0 33.0 41.0 26 37.157748988257055 39.0 35.0 40.0 33.0 41.0 27 36.953160884861674 39.0 35.0 40.0 33.0 41.0 28 37.00146291627015 39.0 35.0 40.0 33.0 41.0 29 36.9679365234366 38.0 35.0 40.0 33.0 41.0 30 36.79545611573621 38.0 35.0 40.0 32.0 41.0 31 36.593442855524124 38.0 35.0 40.0 32.0 41.0 32 36.33084293640828 38.0 35.0 40.0 31.0 41.0 33 36.116383833117 38.0 35.0 40.0 31.0 41.0 34 35.900288621956825 38.0 35.0 40.0 30.0 41.0 35 35.74794726500065 38.0 35.0 40.0 30.0 41.0 36 35.547816081576926 38.0 35.0 40.0 29.0 41.0 37 35.377709688503856 38.0 34.0 40.0 29.0 41.0 38 35.221125137378706 38.0 34.0 40.0 28.0 41.0 39 35.17501748037546 38.0 34.0 40.0 27.0 41.0 40 34.943959620563 37.0 34.0 40.0 27.0 41.0 41 34.792583714646575 37.0 34.0 40.0 26.0 40.0 42 34.78612864266612 37.0 34.0 40.0 26.0 41.0 43 34.65700417225931 37.0 34.0 40.0 26.0 41.0 44 34.42852576178969 37.0 34.0 40.0 25.0 40.0 45 34.20386585757939 36.0 33.0 39.0 24.0 40.0 46 34.17627496193009 36.0 33.0 39.0 24.0 40.0 47 34.021198467438595 36.0 33.0 39.0 24.0 40.0 48 33.995499782128654 36.0 33.0 39.0 24.0 40.0 49 33.883754351669225 36.0 33.0 39.0 24.0 40.0 50 33.92476575375655 36.0 33.0 39.0 24.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 6.0 15 13.0 16 47.0 17 150.0 18 368.0 19 771.0 20 1393.0 21 2376.0 22 3713.0 23 5990.0 24 9028.0 25 12924.0 26 16864.0 27 18739.0 28 19053.0 29 21304.0 30 26251.0 31 35361.0 32 50647.0 33 97906.0 34 95001.0 35 114487.0 36 141964.0 37 263210.0 38 120256.0 39 27677.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.094335068627174 22.971378245845475 28.15994059896656 15.774346086560792 2 33.01907042173076 24.34078947732065 30.565461357545765 12.074678743402828 3 29.6336352824451 24.26008956216611 33.64974578605494 12.456529369333849 4 26.857502927214387 26.433552003080603 31.99521327900522 14.713731790699796 5 17.14467854994413 48.074118634402666 23.88634577702687 10.894857038626332 6 20.223067094241102 40.68049558591731 28.6358490027204 10.460588317121188 7 38.15917597648279 56.715181809723234 4.0828076937604045 1.0428345200335696 8 86.6404791142908 3.2364719397366937 8.28731012258833 1.8357388233841823 9 82.72846781630267 4.743607341481323 9.57786390272528 2.9500609394907245 10 54.03301510912453 20.580873567369228 14.309126736637301 11.076984586868944 11 48.55748901661258 18.082216262875367 19.851442142490626 13.508852578021433 12 43.022174973261244 19.46305077001169 24.140237290914904 13.374536965812162 13 21.427946306919466 39.78883522201228 23.763269194097113 15.019949276971136 14 15.187337114683238 42.22300629293517 27.582512438933836 15.007144153447758 15 13.979325713517143 21.71619977098175 49.41312921290867 14.891345302592438 16 15.456152585483412 15.240584318974706 49.114742197856664 20.18852089768522 17 15.84187238542869 16.215063431423037 30.354038634623766 37.58902554852451 18 21.304040615272367 21.782620591559855 35.57060643775282 21.342732355414956 19 30.32124277869338 23.33010595088176 25.748339709793523 20.600311560631337 20 32.67545091998825 21.24508177315033 24.73056269766182 21.348904609199607 21 22.65309262157728 26.660267175678005 28.066159190716196 22.620481012028527 22 22.23319511783938 23.47381812855423 25.601034727679238 28.691952025927154 23 20.303582763014013 29.430043030742432 24.948526167131735 25.317848039111823 24 21.16640856819373 22.81338697359657 38.782297239160094 17.237907219049603 25 18.451538134855454 22.54005746644643 36.59105502241818 22.417349376279937 26 17.1333473974738 32.95983521003627 28.327512683060295 21.579304709429636 27 17.905892475654145 32.046802265862 30.460072427252623 19.587232831231237 28 16.186873735033437 26.907525819827306 40.022643880302496 16.882956564836764 29 16.269323990813476 23.386301097279325 38.6096583795715 21.734716532335703 30 19.176087030620828 28.526498775222176 32.679412217193324 19.618001976963676 31 30.210050087378846 24.785191749815525 24.836412243909045 20.168345918896584 32 30.515346341742035 25.371095243403293 26.633090834387374 17.480467580467305 33 28.885226480258464 26.091867088345218 24.930838514495125 20.092067916901197 34 20.314545422721082 25.83843619041127 28.669934583322203 25.177083803545454 35 20.638819054392297 24.3128761505035 31.819718600501336 23.228586194602872 36 30.9503520487737 23.520616709488596 26.26349259283484 19.265538648902858 37 21.27566667250114 31.25537193356444 28.54823984825468 18.920721545679744 38 21.524952026848382 31.687245452108375 23.873080037549414 22.914722483493826 39 21.8098890560413 30.03520027121067 26.625720979122118 21.529189693625906 40 23.626558378926635 24.69233157347331 26.84617177474406 24.834938272855993 41 18.124592930650582 23.61983338599709 27.35552089676399 30.90005278658834 42 22.265069741861605 25.810983479548188 23.091599009859944 28.832347768730255 43 22.64986830989873 25.74502327492416 24.657324760963352 26.947783654213758 44 20.194140412324977 29.444414248509677 27.882557671420532 22.478887667744814 45 18.146518250064716 36.49626025906883 23.103390778284354 22.253830712582094 46 22.62536354114176 31.215298345559617 26.308356586762084 19.850981526536547 47 22.9092872152357 26.707710618948084 26.40683627774405 23.976165888072167 48 23.236600912203837 22.991921717397375 30.485774797490194 23.285702572908594 49 21.372396022857608 23.20896395495913 32.53606853228411 22.882571489899153 50 19.81542197488169 31.11930598072967 27.19946421152222 21.86580783286642 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 886.0 1 1370.5 2 1855.0 3 7441.5 4 13028.0 5 9612.5 6 6197.0 7 6448.0 8 6699.0 9 7012.5 10 7326.0 11 7318.0 12 7310.0 13 7067.5 14 6825.0 15 6184.5 16 5544.0 17 5178.5 18 4813.0 19 4454.5 20 4096.0 21 4291.5 22 4487.0 23 4755.0 24 5023.0 25 5947.5 26 6872.0 27 7813.0 28 8754.0 29 10908.5 30 13063.0 31 14975.5 32 16888.0 33 18474.0 34 20060.0 35 21025.5 36 21991.0 37 27383.5 38 32776.0 39 48054.0 40 63332.0 41 80838.5 42 98345.0 43 104004.0 44 109663.0 45 105299.5 46 100936.0 47 94541.5 48 88147.0 49 84240.0 50 80333.0 51 75084.0 52 69835.0 53 62883.5 54 55932.0 55 51005.5 56 46079.0 57 44992.5 58 43906.0 59 41312.0 60 38718.0 61 34731.0 62 30744.0 63 26485.0 64 22226.0 65 18368.5 66 14511.0 67 12083.0 68 9655.0 69 8531.0 70 7407.0 71 6494.5 72 5582.0 73 4192.5 74 2803.0 75 2107.5 76 1412.0 77 1149.5 78 887.0 79 602.0 80 317.0 81 217.5 82 118.0 83 94.5 84 71.0 85 51.5 86 32.0 87 19.5 88 7.0 89 5.0 90 3.0 91 3.0 92 3.0 93 4.0 94 5.0 95 3.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1085503.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.546329486893118 #Duplication Level Percentage of deduplicated Percentage of total 1 72.12030372333787 14.818075229945043 2 6.105674062579356 2.5089838205866544 3 2.7764489038179154 1.7113750194409834 4 1.8045284934843038 1.4830574798246146 5 1.413115255671467 1.4517165822990583 6 1.17070109097958 1.4432166207559014 7 0.9557776548078326 1.3746405828324206 8 0.877667602190843 1.4426278187667598 9 0.7994576681277822 1.4783328594158998 >10 10.425768728721854 47.90524197861028 >50 1.4087375953042978 19.079498723508 >100 0.1394555672939648 4.20791164035452 >500 4.727307365897112E-4 0.0540036209873996 >1k 0.0018909229463588448 1.041318022672502 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4197 0.3866410318534357 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2982 0.27471135501237676 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1812 0.1669272217580237 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1730 0.1593731201111374 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.011607522042776482 0.0 2 0.0 0.0 0.0 0.040442080768086315 0.0 3 0.0 0.0 0.0 0.052786588337388286 0.0 4 0.0 0.0 0.0 0.07148759607297263 0.0 5 0.0 0.0 0.0 0.11321940151247854 0.0 6 0.0 0.0 0.0 0.18221967143342763 0.0 7 0.0 0.0 0.0 0.22616243345251003 0.0 8 0.0 0.0 0.0 0.47425018631915344 0.0 9 0.0 0.0 0.0 0.589496298029577 0.0 10 0.0 0.0 0.0 0.8063542892097028 0.0 11 0.0 0.0 0.0 0.9855338953462127 0.0 12 0.0 0.0 0.0 1.1551326896378913 0.0 13 0.0 0.0 0.0 1.2244093291312874 0.0 14 0.0 0.0 0.0 1.2511250544678365 0.0 15 0.0 0.0 0.0 1.2917513816175543 0.0 16 0.0 0.0 0.0 1.3896783334546288 0.0 17 0.0 0.0 0.0 1.4996734232885585 0.0 18 0.0 0.0 0.0 1.6761814568914135 0.0 19 0.0 0.0 0.0 1.7399307049358685 0.0 20 0.0 0.0 0.0 1.803219337026245 0.0 21 0.0 0.0 0.0 1.888709658103202 0.0 22 0.0 0.0 0.0 1.9714362834556882 0.0 23 0.0 0.0 0.0 2.076640967367202 0.0 24 0.0 0.0 0.0 2.1508922591646455 0.0 25 0.0 0.0 0.0 2.209482608523422 0.0 26 0.0 0.0 0.0 2.269362682553618 0.0 27 0.0 0.0 0.0 2.325465705760371 0.0 28 0.0 0.0 0.0 2.38506941021812 0.0 29 0.0 0.0 0.0 2.452042969941124 0.0 30 0.0 0.0 0.0 2.540389109933367 0.0 31 0.0 0.0 0.0 2.6210890250879086 0.0 32 0.0 0.0 0.0 2.697919766228191 0.0 33 0.0 0.0 0.0 2.772447427598081 0.0 34 0.0 0.0 0.0 2.8434744077169753 0.0 35 0.0 0.0 0.0 2.948494845246858 0.0 36 0.0 0.0 0.0 3.0339851663238147 0.0 37 0.0 0.0 0.0 3.1183700091109836 0.0 38 0.0 0.0 0.0 3.2008202648910227 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAATC 20 7.856286E-4 44.000004 14 CGCATCC 20 7.856286E-4 44.000004 22 TGCGGTC 20 7.856286E-4 44.000004 28 TATGCGT 20 7.856286E-4 44.000004 20 TCGATAT 20 7.856286E-4 44.000004 16 ATCCGGC 20 7.856286E-4 44.000004 44 GTATATC 20 7.856286E-4 44.000004 41 GTTATCA 20 7.856286E-4 44.000004 37 TGCCGTA 20 7.856286E-4 44.000004 25 TTGATCG 25 4.4426757E-5 44.0 40 GGTCGTA 35 1.4459874E-7 44.0 8 CACCTCG 25 4.4426757E-5 44.0 35 TACGCTA 30 2.5275858E-6 44.0 21 GTTAACG 30 2.5275858E-6 44.0 1 CGAGGTA 25 4.4426757E-5 44.0 5 TCGCTAG 30 2.5275858E-6 44.0 2 ACTACGG 35 1.4459874E-7 44.0 2 GTCGTTA 25 4.4426757E-5 44.0 10 TCGTACA 25 4.4426757E-5 44.0 34 ATGCGAA 60 0.0 44.0 1 >>END_MODULE