##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545715_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 409912 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.06388200394231 31.0 31.0 33.0 30.0 33.0 2 31.217349089560685 31.0 31.0 33.0 30.0 34.0 3 31.151222701457876 31.0 31.0 34.0 28.0 34.0 4 35.130942738929335 35.0 35.0 37.0 33.0 37.0 5 32.92982396221628 35.0 35.0 37.0 28.0 37.0 6 34.09178311442456 35.0 35.0 37.0 29.0 37.0 7 14.71486075060013 0.0 0.0 35.0 0.0 37.0 8 24.60987480239661 17.0 17.0 35.0 17.0 37.0 9 32.63107203497336 32.0 32.0 37.0 27.0 39.0 10 35.547934678662735 37.0 35.0 37.0 32.0 39.0 11 36.551955053767635 37.0 35.0 39.0 33.0 39.0 12 36.330932004918125 37.0 35.0 39.0 32.0 39.0 13 35.87827387341673 37.0 35.0 39.0 31.0 39.0 14 36.93359062432913 39.0 35.0 40.0 31.0 41.0 15 37.32582359140498 39.0 35.0 41.0 32.0 41.0 16 37.422019848162535 39.0 35.0 41.0 32.0 41.0 17 37.39884170260934 39.0 35.0 41.0 32.0 41.0 18 37.31321600733816 39.0 35.0 41.0 32.0 41.0 19 37.223147895157986 39.0 35.0 40.0 32.0 41.0 20 37.31498955873456 39.0 35.0 41.0 32.0 41.0 21 37.143828431468215 39.0 35.0 40.0 32.0 41.0 22 37.205183063681964 39.0 35.0 41.0 32.0 41.0 23 37.19102880618279 39.0 35.0 41.0 32.0 41.0 24 37.029811276566676 39.0 35.0 40.0 32.0 41.0 25 36.79459005835399 38.0 35.0 40.0 32.0 41.0 26 36.65339877827436 38.0 35.0 40.0 31.0 41.0 27 36.545470735182185 38.0 35.0 40.0 31.0 41.0 28 36.48285729620016 38.0 35.0 40.0 31.0 41.0 29 36.50562559768926 38.0 35.0 40.0 31.0 41.0 30 36.271014266476705 38.0 35.0 40.0 30.0 41.0 31 36.123897324303755 38.0 35.0 40.0 30.0 41.0 32 35.99027108257382 38.0 35.0 40.0 30.0 41.0 33 35.78916450360077 38.0 34.0 40.0 29.0 41.0 34 35.63377261460997 38.0 34.0 40.0 29.0 41.0 35 35.448415757528444 38.0 34.0 40.0 27.0 41.0 36 35.25526698413318 38.0 34.0 40.0 26.0 41.0 37 35.09116590878042 38.0 34.0 40.0 26.0 41.0 38 35.04044526630106 38.0 34.0 40.0 26.0 41.0 39 34.940953180194775 38.0 34.0 40.0 25.0 41.0 40 34.76336384394699 37.0 34.0 40.0 24.0 41.0 41 34.65102509806983 37.0 34.0 40.0 24.0 41.0 42 34.605554362887645 37.0 33.0 40.0 24.0 41.0 43 34.513524854115026 37.0 33.0 40.0 23.0 41.0 44 34.28053826187084 37.0 33.0 40.0 23.0 41.0 45 34.18208786276079 37.0 33.0 40.0 23.0 41.0 46 34.17831388200394 36.0 33.0 40.0 23.0 41.0 47 34.12889351860887 36.0 33.0 40.0 23.0 41.0 48 34.11088965436484 36.0 33.0 40.0 23.0 41.0 49 34.023910009953354 36.0 33.0 40.0 23.0 41.0 50 33.87326548137161 36.0 33.0 40.0 23.0 41.0 51 33.66810681316966 36.0 33.0 40.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 1.0 14 5.0 15 14.0 16 50.0 17 106.0 18 228.0 19 435.0 20 806.0 21 1299.0 22 2028.0 23 3096.0 24 4277.0 25 5927.0 26 7071.0 27 7613.0 28 8088.0 29 9793.0 30 11890.0 31 15390.0 32 20737.0 33 31853.0 34 41330.0 35 41989.0 36 47279.0 37 71804.0 38 65140.0 39 11660.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.67286637131872 23.609457639688518 28.370479517554987 15.34719647143777 2 32.49551123167899 24.24764339663147 31.064472374558445 12.192372997131091 3 30.212582212767618 23.965387692968246 33.363746365073474 12.458283729190656 4 27.539569468568864 27.146802240480884 30.449218368820624 14.864409922129628 5 20.902535178282168 37.076494467105135 28.64663635121685 13.374334003395852 6 20.195066258123695 41.40205702687406 28.089199633091983 10.313677081910264 7 36.35365639454322 58.61745935713031 4.269452955756357 0.7594312925701125 8 87.25824079314584 3.4390308163703427 7.506733152481508 1.7959952380023028 9 83.23932941704561 4.8720213118913325 8.794570541969984 3.0940787290930736 10 54.428023575791876 20.968646929096977 13.642196373855853 10.961133121255294 11 49.36010655945666 18.206590682878275 19.236811803509045 13.196490954156015 12 43.703282655789536 19.78424637483167 23.427711313647805 13.084759655730988 13 21.55072308202736 40.849255449950235 22.864419680321628 14.735601787700775 14 14.995657604559026 43.3651613029138 26.886990378422688 14.75219071410449 15 13.728556373075197 22.130115732157147 49.27106305743672 14.870264837330941 16 15.342561330236734 15.571390932687992 48.97563379457054 20.11041394250473 17 15.656287203107007 16.47817092449111 29.673686059446908 38.19185581295498 18 21.195036983547688 22.150607935361734 35.51493979195535 21.13941528913523 19 31.06666796775893 23.307197642420814 25.2651788676594 20.360955522160854 20 33.35154862507075 21.3558031967837 24.18250746501688 21.110140713128672 21 22.618757196666603 27.485167548156674 27.607876812584166 22.28819844259256 22 22.191104432170807 23.70142859930912 24.82728000156131 29.28018696695876 23 20.33143699135424 30.070600519135816 24.336198989051308 25.261763500458635 24 20.668826479829818 23.097884423973927 39.15620913757099 17.077079958625266 25 18.13999102246336 22.999814594351957 36.69763266262027 22.162561720564415 26 16.920948886590292 33.887029411190696 27.76425183941919 21.42776986279982 27 17.655740744354887 33.1861472706337 29.67246628544663 19.485645699564785 28 15.954399968773785 27.537129920568315 39.80683658931673 16.701633521341165 29 16.048322566794823 23.819502722535567 38.52656179862995 21.605612912039657 30 19.0901949686762 29.57195690782412 31.963201857959756 19.374646265539923 31 30.9834793809403 25.092946778820817 24.15030543140967 19.77326840882921 32 31.374782880227954 25.29201389566541 26.233679423876342 17.099523800230294 33 29.75955814906614 26.17878959386405 24.172017408614533 19.88963484845528 34 20.37217744296337 25.875065867796014 28.130915903901325 25.621840785339295 35 20.62125529381916 24.235689611428796 32.02419055797342 23.118864536778624 36 31.59312242627686 23.78339741212748 25.756503834969458 18.866976326626204 37 21.085013368723043 32.363531684849434 27.906721442651104 18.64473350377642 38 21.273590429165285 32.78874490134468 23.349889732430377 22.587774937059663 39 21.70539042526201 30.96323113253576 26.074620894240713 21.256757547961513 40 24.169333905813932 24.687493901129997 26.441041003922795 24.70213118913328 41 18.010451023634342 23.54700521087453 27.05361150686001 31.38893225863112 42 21.94397821971545 25.699418411756668 22.781719003103102 29.574884365424776 43 22.294785222194033 25.560608130525576 24.534046331895627 27.610560315384763 44 19.874753605651946 29.5790315970257 28.413659517164657 22.132555280157693 45 18.113643904057454 37.39095220437557 22.63510216827026 21.860301723296708 46 22.345771775405453 32.151778918401995 25.7928531001776 19.709596206014947 47 22.644128495872284 26.93700111243389 26.008265188625852 24.410605203067977 48 22.952975272741465 23.175462050391303 30.970061866937293 22.901500809929935 49 21.280421163566814 23.588477526883818 32.78606139854408 22.345039911005287 50 19.56688264798298 32.30083530123539 26.773307441597222 21.35897460918441 51 19.523458693573254 33.56232557231797 24.340834130252347 22.573381603856436 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 320.0 1 511.0 2 702.0 3 2327.0 4 3952.0 5 3039.0 6 2126.0 7 2200.0 8 2274.0 9 2293.5 10 2313.0 11 2334.5 12 2356.0 13 2308.5 14 2261.0 15 2103.0 16 1945.0 17 1796.5 18 1648.0 19 1581.5 20 1515.0 21 1557.5 22 1600.0 23 1682.0 24 1764.0 25 1999.0 26 2685.0 27 3136.0 28 3939.0 29 4742.0 30 5331.0 31 5920.0 32 6812.5 33 7705.0 34 8126.5 35 8548.0 36 9957.5 37 11367.0 38 16262.0 39 21157.0 40 27320.0 41 33483.0 42 37015.0 43 40547.0 44 39281.0 45 38015.0 46 36351.5 47 34688.0 48 32006.5 49 29325.0 50 28202.0 51 27079.0 52 25122.5 53 23166.0 54 21172.5 55 19179.0 56 18198.5 57 17218.0 58 16182.0 59 15146.0 60 13895.5 61 12645.0 62 11034.0 63 9423.0 64 7973.5 65 6524.0 66 5490.5 67 4457.0 68 3829.5 69 3202.0 70 2875.0 71 2548.0 72 2208.0 73 1868.0 74 1401.5 75 669.0 76 403.0 77 316.0 78 229.0 79 189.5 80 150.0 81 98.0 82 46.0 83 36.0 84 26.0 85 15.0 86 4.0 87 6.5 88 9.0 89 7.5 90 6.0 91 4.0 92 2.0 93 2.5 94 3.0 95 2.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 409912.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.401145811120386 #Duplication Level Percentage of deduplicated Percentage of total 1 68.22642903955976 20.05935188364155 2 7.543042614801916 4.4354819155457195 3 4.072022315434029 3.591663655266358 4 2.889504558570316 3.398189793936917 5 2.1790422164295093 3.2033168966915473 6 1.820233479741203 3.2110169968892497 7 1.4277695929177807 2.9384643390241774 8 1.274331535568581 2.9973445831168637 9 1.093577006820595 2.8937175329898817 >10 9.317349046333426 49.21523827921561 >50 0.13680035968664433 2.5517097023259807 >100 0.017410954869209277 0.7317761297652459 >500 8.290930890099656E-4 0.23644998196944988 >1k 0.0016581861780199311 0.5362783096214327 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1106 0.2698140088604383 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 1094 0.2668865512597826 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 970 0.2366361560530065 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.010490056402349773 0.0 2 0.0 0.0 0.0 0.03927672280879799 0.0 3 0.0 0.0 0.0 0.050742598411366344 0.0 4 0.0 0.0 0.0 0.06903920841546478 0.0 5 0.0 0.0 0.0 0.1068522024239349 0.0 6 0.0 0.0 0.0 0.1478366088331154 0.0 7 0.0 0.0 0.0 0.1761353656394543 0.0 8 0.0 0.0 0.0 0.3844727648861219 0.0 9 0.0 0.0 0.0 0.4796151369074338 0.0 10 0.0 0.0 0.0 0.6552625929467788 0.0 11 0.0 0.0 0.0 0.8050508401803314 0.0 12 0.0 0.0 0.0 0.9428853022112063 0.0 13 0.0 0.0 0.0 0.9943597650227366 0.0 14 0.0 0.0 0.0 1.0197310642284199 0.0 15 0.0 0.0 0.0 1.0585198774371085 0.0 16 0.0 0.0 0.0 1.1363414586545404 0.0 17 0.0 0.0 0.0 1.2229454126739399 0.0 18 0.0 0.0 0.0 1.3851753547102792 0.0 19 0.0 0.0 0.0 1.43982122992252 0.0 20 0.0 0.0 0.0 1.5008099299361815 0.0 21 0.0 0.0 0.0 1.5722886863521928 0.0 22 0.0 0.0 0.0 1.6466949003688596 0.0 23 0.0 0.0 0.0 1.7323230351880403 0.0 24 0.0 0.0 0.0 1.7969710572025215 0.0 25 0.0 0.0 0.0 1.8482015652139971 0.0 26 2.4395480005464588E-4 0.0 0.0 1.8996760280255274 0.0 27 2.4395480005464588E-4 0.0 0.0 1.9452955756357462 0.0 28 2.4395480005464588E-4 0.0 0.0 1.9977458576474951 0.0 29 2.4395480005464588E-4 0.0 0.0 2.058246648061047 0.0 30 2.4395480005464588E-4 0.0 0.0 2.1346045004781513 0.0 31 2.4395480005464588E-4 0.0 0.0 2.200960206093015 0.0 32 2.4395480005464588E-4 0.0 0.0 2.2646324089072776 0.0 33 2.4395480005464588E-4 0.0 0.0 2.333915572122797 0.0 34 2.4395480005464588E-4 0.0 0.0 2.408321786139464 0.0 35 2.4395480005464588E-4 0.0 0.0 2.513710259763071 0.0 36 2.4395480005464588E-4 0.0 0.0 2.5834813325786996 0.0 37 2.4395480005464588E-4 0.0 0.0 2.657155682195203 0.0 38 2.4395480005464588E-4 0.0 0.0 2.7283904838111597 0.0 39 2.4395480005464588E-4 0.0 0.0 2.8006011046273347 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGAT 135 0.0 45.000004 5 ATAGGCG 45 3.8380676E-10 45.0 5 TAGACAC 40 6.7957444E-9 45.0 43 GTCTCGA 20 7.02797E-4 45.0 35 TACGGGT 25 3.886399E-5 45.0 4 GTTACGG 25 3.886399E-5 45.0 2 CTACGGG 25 3.886399E-5 45.0 3 GTATATC 20 7.02797E-4 45.0 41 TTACGGG 55 1.8189894E-12 45.0 3 ATGCGAA 25 3.886399E-5 45.0 1 GCTACGA 25 3.886399E-5 45.0 10 AGTACGG 50 2.1827873E-11 45.0 2 TAGTACG 20 7.02797E-4 45.0 1 CGAAGGT 20 7.02797E-4 45.0 4 CGACGGT 60 0.0 44.999996 28 ACTAGGT 30 2.1620726E-6 44.999996 4 GACGGTC 60 0.0 44.999996 29 ACGCTCC 30 2.1620726E-6 44.999996 14 GCGATAT 30 2.1620726E-6 44.999996 9 ACGACGG 60 0.0 44.999996 27 >>END_MODULE