##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545714_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 890969 Sequences flagged as poor quality 0 Sequence length 50 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.539995218688865 31.0 31.0 33.0 30.0 34.0 2 31.722680587091133 31.0 31.0 34.0 30.0 34.0 3 31.760432742328856 31.0 31.0 34.0 30.0 34.0 4 35.656852258608325 37.0 35.0 37.0 33.0 37.0 5 27.315788764816734 35.0 28.0 37.0 0.0 37.0 6 31.447472358746488 35.0 28.0 37.0 17.0 37.0 7 14.791515754195713 0.0 0.0 32.0 0.0 37.0 8 24.990505842515283 17.0 17.0 35.0 17.0 37.0 9 33.203958835829305 32.0 32.0 37.0 28.0 39.0 10 36.08370324893459 37.0 35.0 39.0 32.0 39.0 11 37.0828199409856 39.0 37.0 39.0 34.0 39.0 12 36.91231120274667 39.0 35.0 39.0 33.0 39.0 13 36.36216074857823 39.0 35.0 39.0 32.0 39.0 14 37.675197453558994 40.0 36.0 41.0 33.0 41.0 15 38.00635375641577 40.0 36.0 41.0 33.0 41.0 16 38.08792449568953 40.0 36.0 41.0 33.0 41.0 17 38.11156617121359 40.0 36.0 41.0 34.0 41.0 18 38.086018705476846 40.0 36.0 41.0 34.0 41.0 19 37.992361125920205 40.0 36.0 41.0 34.0 41.0 20 37.998916909567 40.0 36.0 41.0 34.0 41.0 21 37.836123366806255 40.0 35.0 41.0 34.0 41.0 22 37.733168045128394 39.0 35.0 41.0 33.0 41.0 23 37.639455469269976 39.0 35.0 41.0 33.0 41.0 24 37.49830016532562 39.0 35.0 41.0 33.0 41.0 25 37.32043202400981 39.0 35.0 41.0 33.0 41.0 26 37.05939039405411 39.0 35.0 40.0 33.0 41.0 27 36.83006030512846 38.0 35.0 40.0 32.0 41.0 28 36.87326270610986 38.0 35.0 40.0 32.0 41.0 29 36.86189194012362 38.0 35.0 40.0 32.0 41.0 30 36.66141695165601 38.0 35.0 40.0 32.0 41.0 31 36.41617946303407 38.0 35.0 40.0 31.0 41.0 32 36.14073778100024 38.0 35.0 40.0 31.0 41.0 33 35.92557653521054 38.0 35.0 40.0 30.0 41.0 34 35.67632543893222 38.0 35.0 40.0 30.0 41.0 35 35.49030774359153 38.0 35.0 40.0 29.0 41.0 36 35.26923495654731 38.0 34.0 40.0 27.0 41.0 37 35.08168073187731 38.0 34.0 40.0 27.0 41.0 38 34.92550694805319 38.0 34.0 40.0 26.0 41.0 39 34.890943455945155 38.0 34.0 40.0 26.0 41.0 40 34.623930798939135 37.0 34.0 40.0 24.0 41.0 41 34.46585795914336 37.0 34.0 40.0 24.0 40.0 42 34.454272819817525 37.0 34.0 40.0 24.0 41.0 43 34.316578915764744 37.0 33.0 40.0 23.0 41.0 44 34.090540748331314 36.0 33.0 40.0 23.0 40.0 45 33.84755025146779 36.0 33.0 39.0 23.0 40.0 46 33.814783679342376 36.0 33.0 39.0 23.0 40.0 47 33.68241880469466 36.0 33.0 39.0 23.0 40.0 48 33.6700412696738 36.0 33.0 39.0 23.0 40.0 49 33.57056642823712 36.0 33.0 39.0 23.0 40.0 50 33.59002052821142 36.0 33.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 3.0 14 8.0 15 24.0 16 51.0 17 147.0 18 361.0 19 750.0 20 1423.0 21 2375.0 22 3904.0 23 5823.0 24 8605.0 25 12377.0 26 15566.0 27 16649.0 28 16986.0 29 18476.0 30 22488.0 31 29951.0 32 41174.0 33 79404.0 34 77585.0 35 92784.0 36 112647.0 37 212072.0 38 97384.0 39 21949.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.101867741750834 22.16743792432733 30.38512002101083 16.345574312910998 2 33.363001406334 25.420413055897566 29.240074570495718 11.976510967272711 3 28.526020546169395 23.510133349196213 35.3082991664132 12.655546938221196 4 26.10764235343766 27.066598276707722 32.69047520171858 14.135284168136042 5 17.16277446241115 47.10511813542334 25.001655500920904 10.730451901244601 6 19.674983080219402 40.15717718573823 29.71820568392391 10.449634050118467 7 38.02960596833335 56.501965837195236 4.551673515015674 0.9167546794557385 8 86.65946851125011 3.138717508689977 8.566628019605622 1.635185960454292 9 83.22601571996331 4.354248015363049 9.986430504316088 2.4333057603575434 10 53.523298790418075 20.1758983758133 15.45541988554035 10.845382948228277 11 48.83649150531612 17.668067014677277 20.466256401737883 13.029185078268716 12 42.0075221472352 20.423942920572994 24.48457802684493 13.083956905346875 13 20.365018311523745 41.5548689123864 24.851032976455972 13.22907979963388 14 13.972652247160115 42.48812248237593 29.264093363517695 14.275131906946257 15 12.695615672374686 20.880412225341175 51.28023533927667 15.143736763007468 16 14.17411829143326 15.536679727353029 50.03383956119686 20.25536242001686 17 14.905569105097932 15.976537904236848 30.752921818828717 38.3649711718365 18 20.590054199416592 21.020933388254807 36.86289870915823 21.526113703170367 19 28.904372654940858 23.13043439221791 26.71260167300995 21.252591279831286 20 30.99647686956561 21.589640043592986 25.506835815836464 21.907047271004938 21 21.726008424535532 27.12978790507863 29.165548969717243 21.9786547006686 22 21.91591402169997 23.288464581820467 26.16432221547551 28.631299181004056 23 18.795491201152903 29.18900657598637 25.64410209558357 26.371400127277155 24 19.166435644786745 22.19415041376299 41.379105221393786 17.26030872005648 25 17.57580791250874 23.065448966237884 38.03544231056299 21.323300810690384 26 16.17082075807351 33.3674909003568 29.065882202411082 21.3958061391586 27 17.0814023832479 32.38047563944424 31.206809664533786 19.331312312774067 28 15.02442845935156 26.757496613237947 40.79614442253322 17.421930504877274 29 14.820942142768153 22.66027213068019 40.098813763441825 22.419971963109827 30 18.950603219640637 28.490441306038704 33.464800683300986 19.094154791019665 31 28.850610964017825 25.610767602464286 26.05556422277318 19.483057210744708 32 29.16162066244729 25.838272712069667 27.646865379154605 17.353241246328434 33 27.8028752964469 26.12324334516689 25.907186445319645 20.16669491306656 34 19.143763699971604 26.771301807358057 29.362749994668725 24.722184498001614 35 19.929537391312156 24.374136473884054 32.340182430589614 23.356143704214176 36 30.53091633940126 23.518438913138393 27.060874171828647 18.8897705756317 37 19.560164270586295 31.6960522756684 28.771708106567118 19.972075347178183 38 21.768097430999283 31.748579355735163 24.04730130902422 22.436021904241336 39 20.67131404122927 29.808893463184464 27.16390805965191 22.35588443593436 40 23.554803814723073 24.554389658899467 26.310567483268215 25.580239043109245 41 17.69365713060724 23.322360261692605 28.193349039079923 30.790633568620233 42 22.78956955853683 25.438258794638198 24.03304716550183 27.739124481323145 43 22.417278266696147 26.352880964433105 25.40357745331207 25.826263315558677 44 19.899570018709966 29.98342254332081 28.116803165991183 22.00020427197804 45 17.560543632831223 36.41394930687824 23.759636979513317 22.265870080777223 46 22.45858161170591 30.381416188442024 27.55022902031384 19.609773179538234 47 22.767122088422827 26.497442671967264 27.14954167877895 23.58589356083096 48 23.097099899098623 23.414170414458866 30.01888954610093 23.46984014034158 49 21.06560385378167 23.50990887449507 32.832343212839056 22.5921440588842 50 19.840869884361858 31.880570480005478 27.145052184756146 21.133507450876518 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 848.0 1 1132.5 2 1417.0 3 6349.0 4 11281.0 5 8430.5 6 5580.0 7 5857.5 8 6135.0 9 6568.5 10 7002.0 11 6981.5 12 6961.0 13 6567.5 14 6174.0 15 5797.0 16 5420.0 17 5001.5 18 4583.0 19 4405.5 20 4228.0 21 4376.0 22 4524.0 23 4534.5 24 4545.0 25 5208.5 26 5872.0 27 6970.5 28 8069.0 29 9892.5 30 11716.0 31 13649.0 32 15582.0 33 16803.0 34 18024.0 35 19148.5 36 20273.0 37 24656.0 38 29039.0 39 41656.0 40 54273.0 41 67181.5 42 80090.0 43 84623.5 44 89157.0 45 87096.5 46 85036.0 47 80099.5 48 75163.0 49 72311.0 50 69459.0 51 61769.5 52 54080.0 53 48173.5 54 42267.0 55 39473.0 56 36679.0 57 34567.0 58 32455.0 59 29574.0 60 26693.0 61 24155.0 62 21617.0 63 18684.5 64 15752.0 65 12904.0 66 10056.0 67 8905.0 68 7754.0 69 6635.5 70 5517.0 71 4613.0 72 3709.0 73 2803.5 74 1898.0 75 1440.5 76 983.0 77 790.0 78 597.0 79 430.5 80 264.0 81 184.5 82 105.0 83 80.0 84 55.0 85 39.0 86 23.0 87 16.5 88 10.0 89 5.0 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 890969.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.516316238631727 #Duplication Level Percentage of deduplicated Percentage of total 1 73.35217287739903 16.516207212983012 2 6.183249618280342 2.784480075751982 3 2.6712525865222823 1.8044030397419604 4 1.8007248011067984 1.6218275632187158 5 1.3727302830850796 1.5454414582145053 6 1.1314846746270777 1.5286120051841163 7 0.9238418525566816 1.4561060714654739 8 0.8213612335389111 1.4795223424411819 9 0.7553339289732272 1.530660384947644 >10 9.729736927828457 48.97285761849034 >50 1.1627290719705383 16.76536154009323 >100 0.09279023802156768 2.834320365069751 >500 5.183812179975848E-4 0.0740007046680485 >1k 0.002073524871990339 1.0861996177300624 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3664 0.41123765248847044 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2522 0.2830625981375334 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1563 0.17542697894090592 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1557 0.17475355483748595 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007183190436479832 0.0 2 0.0 0.0 0.0 0.03557924013068917 0.0 3 0.0 0.0 0.0 0.05028233305535883 0.0 4 0.0 0.0 0.0 0.07183190436479833 0.0 5 0.0 0.0 0.0 0.11841040485134724 0.0 6 0.0 0.0 0.0 0.19933353461231534 0.0 7 0.0 0.0 0.0 0.2515239026273641 0.0 8 0.0 0.0 0.0 0.5502997298446972 0.0 9 0.0 0.0 0.0 0.6829642782184341 0.0 10 0.0 0.0 0.0 0.9155200685994687 0.0 11 0.0 0.0 0.0 1.1361786998200836 0.0 12 0.0 0.0 0.0 1.330686028357889 0.0 13 0.0 0.0 0.0 1.4131804810268371 0.0 14 0.0 0.0 0.0 1.4404541572153464 0.0 15 0.0 0.0 0.0 1.4870326577018953 0.0 16 0.0 0.0 0.0 1.6061164866566626 0.0 17 0.0 0.0 0.0 1.7374341868235594 0.0 18 0.0 0.0 0.0 1.9448488106769146 0.0 19 0.0 0.0 0.0 2.0201600729093827 0.0 20 0.0 0.0 0.0 2.1078174437045507 0.0 21 0.0 0.0 0.0 2.2111880435795186 0.0 22 0.0 0.0 0.0 2.3034471457480565 0.0 23 0.0 0.0 0.0 2.4179292433294535 0.0 24 0.0 0.0 0.0 2.5048009526706316 0.0 25 0.0 0.0 0.0 2.56361332436931 0.0 26 0.0 0.0 0.0 2.628149800947059 0.0 27 0.0 0.0 0.0 2.6927985148753772 0.0 28 0.0 0.0 0.0 2.755314719142866 0.0 29 0.0 0.0 0.0 2.828156759662794 0.0 30 0.0 0.0 0.0 2.923558507647292 0.0 31 0.0 0.0 0.0 3.0135728628044296 0.0 32 0.0 0.0 0.0 3.092587957605708 0.0 33 0.0 0.0 0.0 3.1703684415507163 0.0 34 0.0 0.0 0.0 3.2485978748980044 0.0 35 0.0 0.0 0.0 3.3617331242725617 0.0 36 0.0 0.0 0.0 3.4432174407863796 0.0 37 0.0 0.0 0.0 3.5346908815009277 0.0 38 0.0 0.0 0.0 3.6114612292908057 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACCGTT 30 2.5270729E-6 44.000004 9 TCCCTAG 20 7.8555266E-4 44.000004 2 TAGCCGT 20 7.8555266E-4 44.000004 44 TACGCTT 20 7.8555266E-4 44.000004 23 TACGCAA 30 2.5270729E-6 44.000004 1 GCCGAAC 20 7.8555266E-4 44.000004 31 AAGTTCG 20 7.8555266E-4 44.000004 31 TACGAGT 20 7.8555266E-4 44.000004 27 TGTTACG 20 7.8555266E-4 44.000004 1 TCATCGG 20 7.8555266E-4 44.000004 44 TATAGCG 20 7.8555266E-4 44.000004 1 CGTAAAT 60 0.0 44.000004 16 TTACGCT 20 7.8555266E-4 44.000004 22 CGAGACA 60 0.0 44.000004 22 GTCCAAT 20 7.8555266E-4 44.000004 9 GCGTAAA 30 2.5270729E-6 44.000004 1 TCGCCGA 25 4.4420318E-5 44.0 43 TTTACGG 90 0.0 44.0 2 GCGAATA 25 4.4420318E-5 44.0 1 ACGTTAG 50 2.7284841E-11 44.0 2 >>END_MODULE