SRR1545711_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545711_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	171241
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	755	0.440899083747467	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	683	0.39885307840996026	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	283	0.16526415986825585	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGCGAT	120	0.0	45.000004	7
GTATAAG	30	2.154653E-6	45.000004	2
GTTGATC	70	0.0	45.0	16
ATGGGCG	35	1.2038436E-7	45.0	5
TACGGGA	20	7.016458E-4	45.0	4
CTGGTTG	70	0.0	45.0	13
CAAGCGG	45	3.8016879E-10	45.0	21
CTACATA	20	7.016458E-4	45.0	39
GCCAGTA	70	0.0	45.0	25
TAGGAAC	35	1.2038436E-7	45.0	6
CTAGGCG	20	7.016458E-4	45.0	5
ACAAGCC	20	7.016458E-4	45.0	45
GTTATAA	20	7.016458E-4	45.0	1
CTCGTCC	25	3.8768638E-5	44.999996	37
CATAGGC	25	3.8768638E-5	44.999996	4
TATAGGC	25	3.8768638E-5	44.999996	4
CGGTCTA	25	3.8768638E-5	44.999996	31
ACGACGG	25	3.8768638E-5	44.999996	27
CGTTTTA	465	0.0	44.03226	1
AAGGCGA	80	0.0	42.1875	6