##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545711_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 171241 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.01946963636045 31.0 31.0 33.0 30.0 33.0 2 31.1884186614187 31.0 31.0 33.0 30.0 34.0 3 31.074625819751112 31.0 31.0 34.0 28.0 34.0 4 35.04672946315427 35.0 35.0 37.0 32.0 37.0 5 32.830303490402414 35.0 35.0 37.0 28.0 37.0 6 34.01637458318977 35.0 35.0 37.0 28.0 37.0 7 15.364206002067261 0.0 0.0 35.0 0.0 37.0 8 24.943634993955886 17.0 17.0 35.0 17.0 37.0 9 32.64729241244795 32.0 32.0 37.0 27.0 39.0 10 35.47940621696907 37.0 34.0 37.0 32.0 39.0 11 36.49144188599693 37.0 35.0 39.0 32.0 39.0 12 36.41393708282479 37.0 35.0 39.0 32.0 39.0 13 36.178987508832584 38.0 35.0 39.0 32.0 39.0 14 37.2319713152808 39.0 36.0 40.0 32.0 41.0 15 37.53718443597036 39.0 36.0 41.0 32.0 41.0 16 37.55270641960745 39.0 36.0 41.0 32.0 41.0 17 37.499494863963655 39.0 36.0 41.0 32.0 41.0 18 37.3866246985243 39.0 36.0 40.0 32.0 41.0 19 37.315917332881725 39.0 36.0 40.0 32.0 41.0 20 37.392879041818254 39.0 35.0 40.0 32.0 41.0 21 37.27298368965376 39.0 35.0 40.0 32.0 41.0 22 37.28800345711599 39.0 35.0 40.0 32.0 41.0 23 37.26010710051915 39.0 35.0 40.0 32.0 41.0 24 37.074520704737765 39.0 35.0 40.0 32.0 41.0 25 36.82214539742235 38.0 35.0 40.0 31.0 41.0 26 36.70286321616903 38.0 35.0 40.0 31.0 41.0 27 36.60745382239067 38.0 35.0 40.0 31.0 41.0 28 36.50193002843945 38.0 35.0 40.0 31.0 41.0 29 36.503711143943335 38.0 35.0 40.0 31.0 41.0 30 36.2015697175326 38.0 35.0 40.0 30.0 41.0 31 36.05009314358127 38.0 35.0 40.0 30.0 41.0 32 35.88367271856623 38.0 35.0 40.0 30.0 41.0 33 35.63883649359674 38.0 34.0 40.0 28.0 41.0 34 35.40023709275232 38.0 34.0 40.0 26.0 41.0 35 35.15754404611045 38.0 34.0 40.0 25.0 41.0 36 34.94508908497381 38.0 34.0 40.0 24.0 41.0 37 34.80691539993343 38.0 34.0 40.0 24.0 41.0 38 34.68738211059267 38.0 34.0 40.0 23.0 41.0 39 34.6092582967864 38.0 34.0 40.0 23.0 41.0 40 34.463492971893416 38.0 33.0 40.0 23.0 41.0 41 34.31602244789507 38.0 33.0 40.0 23.0 41.0 42 34.26012461968804 38.0 33.0 40.0 22.0 41.0 43 34.17242366022156 37.0 33.0 40.0 22.0 41.0 44 33.86256795977599 37.0 33.0 40.0 20.0 41.0 45 33.82612808848348 37.0 33.0 40.0 20.0 41.0 46 33.80330645114196 37.0 33.0 40.0 20.0 41.0 47 33.74818530608908 37.0 33.0 40.0 20.0 41.0 48 33.71710046075414 37.0 33.0 40.0 20.0 41.0 49 33.62004426510006 36.0 33.0 40.0 20.0 41.0 50 33.48816580141438 36.0 33.0 40.0 20.0 41.0 51 33.32814571276739 36.0 32.0 40.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 1.0 15 5.0 16 27.0 17 53.0 18 106.0 19 227.0 20 401.0 21 628.0 22 1002.0 23 1470.0 24 2145.0 25 2878.0 26 3416.0 27 3644.0 28 3662.0 29 4063.0 30 4828.0 31 6298.0 32 8196.0 33 12108.0 34 15335.0 35 17110.0 36 20650.0 37 30833.0 38 26504.0 39 5649.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.958917548951476 22.259855992431717 26.726076114949105 16.055150343667695 2 36.52104344169913 23.220490419934478 27.71882901875135 12.539637119615046 3 30.933596510181555 23.013180254728717 33.15035534714233 12.902867887947394 4 27.027405819867905 26.42766627151208 31.144410509165443 15.40051739945457 5 20.88693712370285 35.093815149409316 29.589876256270404 14.429371470617433 6 20.249239376084 39.9366974030752 30.20479908433144 9.609264136509363 7 36.262343714414186 56.90868425201908 5.943670032293668 0.8853020012730596 8 83.34277421879106 4.222119702641307 10.350908952879276 2.0841971256883576 9 78.1588521440543 5.912719500586892 12.308384090258759 3.6200442651000633 10 45.516552694740156 23.798622993325196 18.44301306346027 12.241811248474372 11 39.55711541044493 23.034203257397472 24.031043967274194 13.37763736488341 12 35.22462494379266 22.33518841866142 28.367622240000934 14.072564397544982 13 22.6686365998797 34.31070829999825 27.729340520085728 15.291314580036323 14 16.717374927733427 37.68490022833317 30.660881447784117 14.936843396149287 15 16.375751134366183 23.518900263371506 44.5010248713801 15.604323730882207 16 18.189569086842518 19.67519460876776 43.46914582372212 18.666090480667595 17 18.545208215322265 19.384960377479693 31.64020298877021 30.42962841842783 18 22.0519618549296 22.40935290029841 35.60537488101564 19.933310363756345 19 28.378717713631662 23.480358091812125 28.582524045059305 19.558400149496908 20 29.77032369584387 23.382834718320964 27.83445553342949 19.012386052405674 21 23.40444169328607 26.278169363645386 30.757820848978923 19.559568094089617 22 22.755064499740133 23.642118417902257 29.37555842350839 24.227258658849223 23 20.267342517270983 27.871829760396167 28.48792053304991 23.37290718928294 24 20.70415379494397 23.98140632208408 37.56752179676596 17.74691808620599 25 19.814180015300074 24.227258658849223 35.70348222680316 20.255079099047542 26 17.90867841229612 31.053894803230538 30.47751414672888 20.559912637744464 27 18.91895048498899 30.061725871724644 31.987666505100997 19.031657138185366 28 17.186888654002257 27.34625469367733 37.7789197680462 17.68793688427421 29 18.193072920620644 24.735898528973784 36.83755642632314 20.233472124082432 30 20.32865960838818 27.62948125740915 33.13166823365899 18.91019090054368 31 27.794745417277404 25.65799078491716 27.75036352275448 18.79690027505095 32 27.7807300821649 26.02063758095316 28.769395179892665 17.42923715698927 33 27.353262361233583 26.388540127656345 27.220116677664812 19.03808083344526 34 20.758463218504914 27.36786166864244 29.47308179699955 22.400593315853097 35 21.006651444455475 26.03465291606566 31.31376247510818 21.644933164370684 36 28.199438218650908 25.932457764203665 27.50509515828569 18.363008858859736 37 21.517627203765453 30.97389059863 28.52704667690565 18.9814355206989 38 20.864162204145035 31.347632868296728 25.62061655795049 22.167588369607746 39 21.658948499483184 29.63951390146051 27.786569805128448 20.914967793927854 40 23.531163681594943 25.594337804614547 27.94073849136597 22.933760022424536 41 19.18407390753383 25.57389877424215 28.525878732312936 26.716148585911085 42 22.130798114937427 26.68811791568608 25.78938455159687 25.391699417779623 43 22.169924258793163 26.476135972109482 27.655176038448737 23.69876373064862 44 20.493923768256433 29.10167541651824 29.276283133128167 21.128117682097162 45 19.308460006657285 33.543952674885105 25.499150320308807 21.648436998148807 46 22.30949363762183 30.34028065708563 27.35968605649348 19.99053964879906 47 21.111182485502887 29.078900496960426 27.455457513095578 22.35445950444111 48 22.120870585899404 26.6840301096116 30.32976915575125 20.865330148737744 49 21.716177784525904 25.722811709812486 31.118131755829502 21.442878749832108 50 20.206025426153783 31.118715728125856 28.255499559100915 20.419759286619442 51 19.94265392049801 31.599324928025414 26.716148585911085 21.74187256556549 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 159.0 1 228.5 2 298.0 3 1546.0 4 2794.0 5 2031.0 6 1268.0 7 1273.0 8 1278.0 9 1298.0 10 1318.0 11 1295.0 12 1272.0 13 1225.5 14 1179.0 15 1124.5 16 1070.0 17 1052.5 18 1035.0 19 1034.0 20 1033.0 21 1019.5 22 1006.0 23 1091.0 24 1176.0 25 1262.5 26 1623.0 27 1897.0 28 2193.0 29 2489.0 30 2847.0 31 3205.0 32 3670.0 33 4135.0 34 4467.5 35 4800.0 36 5572.0 37 6344.0 38 7656.5 39 8969.0 40 10643.0 41 12317.0 42 13232.5 43 14148.0 44 13978.0 45 13808.0 46 13530.5 47 13253.0 48 12674.5 49 12096.0 50 11442.0 51 10788.0 52 9893.5 53 8999.0 54 8421.0 55 7843.0 56 7395.5 57 6948.0 58 6550.0 59 6152.0 60 5499.0 61 4846.0 62 4268.0 63 3690.0 64 3087.5 65 2485.0 66 2158.5 67 1832.0 68 1615.5 69 1399.0 70 1239.0 71 1079.0 72 891.5 73 704.0 74 535.0 75 278.5 76 191.0 77 159.0 78 127.0 79 94.5 80 62.0 81 40.5 82 19.0 83 15.0 84 11.0 85 6.0 86 1.0 87 1.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 171241.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.453454488119085 #Duplication Level Percentage of deduplicated Percentage of total 1 66.952556223017 33.77987748261223 2 12.68678310589488 12.801840680678108 3 7.029179253909279 10.639391267278281 4 4.389041286155769 8.85769179110143 5 2.905193467365765 7.328852319245975 6 1.901686401148188 5.756798897460304 7 1.2546731946711112 4.431181784736133 8 0.9271155248446126 3.7420944750381038 9 0.6053450930009143 2.7487575989395063 >10 1.3403243168165562 8.682500102195153 >50 0.0023148951931201314 0.07942023230417948 >100 0.0034723427896801973 0.31184120625317535 >500 0.0023148951931201314 0.8397521621574273 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 755 0.440899083747467 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 683 0.39885307840996026 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 283 0.16526415986825585 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008175612148959654 0.0 2 0.0 0.0 0.0 0.030950531706775832 0.0 3 0.0 0.0 0.0 0.03971011615208975 0.0 4 0.0 0.0 0.0 0.05489339585730053 0.0 5 0.0 0.0 0.0 0.08993173363855618 0.0 6 0.0 0.0 0.0 0.13256171127241723 0.0 7 0.0 0.0 0.0 0.15183279705210784 0.0 8 0.0 0.0 0.0 0.2902342312880677 0.0 9 0.0 0.0 0.0 0.35855898996151625 0.0 10 0.0 0.0 0.0 0.47360153234330565 0.0 11 0.0 0.0 0.0 0.6073311882084313 0.0 12 0.0 0.0 0.0 0.7147820907376154 0.0 13 0.0 0.0 0.0 0.7661716528167903 0.0 14 0.0 0.0 0.0 0.7860267108928353 0.0 15 0.0 0.0 0.0 0.8204810763777366 0.0 16 0.0 0.0 0.0 0.8893898073475395 0.0 17 0.0 0.0 0.0 0.9658901781699476 0.0 18 0.0 0.0 0.0 1.085020526626217 0.0 19 0.0 0.0 0.0 1.1510093961142482 0.0 20 0.0 0.0 0.0 1.2111585426387372 0.0 21 0.0 0.0 0.0 1.277731384423123 0.0 22 0.0 0.0 0.0 1.3419683370220916 0.0 23 0.0 0.0 0.0 1.4336519875497107 0.0 24 0.0 0.0 0.0 1.5072324968903474 0.0 25 0.0 0.0 0.0 1.5632938373403567 0.0 26 0.0 0.0 0.0 1.61993915008672 0.0 27 0.0 0.0 0.0 1.6824241857966258 0.0 28 0.0 0.0 0.0 1.7384855262466348 0.0 29 0.0 0.0 0.0 1.8033064511419579 0.0 30 0.0 0.0 0.0 1.8868144895206171 0.0 31 0.0 0.0 0.0 1.9592270542685455 0.0 32 0.0 0.0 0.0 2.032223591312828 0.0 33 0.0 0.0 0.0 2.1087239621352363 0.0 34 0.0 0.0 0.0 2.198071723477438 0.0 35 0.0 0.0 0.0 2.3014348199321426 0.0 36 0.0 0.0 0.0 2.379103135347259 0.0 37 0.0 0.0 0.0 2.4579393953550843 0.0 38 0.0 0.0 0.0 2.5484551012899948 0.0 39 0.0 0.0 0.0 2.66700147744991 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGCGAT 120 0.0 45.000004 7 GTATAAG 30 2.154653E-6 45.000004 2 GTTGATC 70 0.0 45.0 16 ATGGGCG 35 1.2038436E-7 45.0 5 TACGGGA 20 7.016458E-4 45.0 4 CTGGTTG 70 0.0 45.0 13 CAAGCGG 45 3.8016879E-10 45.0 21 CTACATA 20 7.016458E-4 45.0 39 GCCAGTA 70 0.0 45.0 25 TAGGAAC 35 1.2038436E-7 45.0 6 CTAGGCG 20 7.016458E-4 45.0 5 ACAAGCC 20 7.016458E-4 45.0 45 GTTATAA 20 7.016458E-4 45.0 1 CTCGTCC 25 3.8768638E-5 44.999996 37 CATAGGC 25 3.8768638E-5 44.999996 4 TATAGGC 25 3.8768638E-5 44.999996 4 CGGTCTA 25 3.8768638E-5 44.999996 31 ACGACGG 25 3.8768638E-5 44.999996 27 CGTTTTA 465 0.0 44.03226 1 AAGGCGA 80 0.0 42.1875 6 >>END_MODULE