SRR1545709_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545709_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	128132
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	876	0.6836699653482347	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	855	0.6672806168638592	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTAGGTT	25	3.8713602E-5	45.000004	5
TAGGTTC	25	3.8713602E-5	45.000004	6
GCGATTG	50	2.1827873E-11	45.000004	9
AGGTACC	20	7.009812E-4	45.0	7
CGGCGCA	20	7.009812E-4	45.0	22
CACGCCA	20	7.009812E-4	45.0	27
ACTTCCC	20	7.009812E-4	45.0	44
AACGCCG	20	7.009812E-4	45.0	13
AGCGAAG	20	7.009812E-4	45.0	2
CGTAAGG	20	7.009812E-4	45.0	3
TAGGATA	40	6.7338988E-9	45.0	6
GCGTCAT	20	7.009812E-4	45.0	37
CGTCATA	20	7.009812E-4	45.0	38
GATAGGT	20	7.009812E-4	45.0	4
GTACGGG	20	7.009812E-4	45.0	3
CTAGCAG	20	7.009812E-4	45.0	2
TCACGAC	30	2.1503765E-6	44.999996	25
CTCACGA	30	2.1503765E-6	44.999996	24
AAGGTAC	30	2.1503765E-6	44.999996	6
CGGTCTA	30	2.1503765E-6	44.999996	31