##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545706_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1580007 Sequences flagged as poor quality 0 Sequence length 50 %GC 41 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.555258299488546 31.0 31.0 33.0 30.0 34.0 2 31.74127899433357 31.0 31.0 34.0 30.0 34.0 3 31.74324290968331 31.0 31.0 34.0 30.0 34.0 4 35.65376292636678 37.0 35.0 37.0 33.0 37.0 5 27.120964653954065 35.0 25.0 37.0 0.0 37.0 6 31.35752120085544 35.0 26.0 37.0 17.0 37.0 7 14.997184822598888 0.0 0.0 32.0 0.0 37.0 8 25.111942542026714 17.0 17.0 35.0 17.0 37.0 9 33.21619651052179 32.0 32.0 37.0 28.0 39.0 10 36.031425177230226 37.0 35.0 39.0 32.0 39.0 11 36.968617860553785 39.0 37.0 39.0 34.0 39.0 12 37.179430850622815 39.0 37.0 39.0 34.0 39.0 13 36.91881111919125 39.0 37.0 39.0 33.0 39.0 14 38.318762511811656 40.0 38.0 41.0 34.0 41.0 15 38.522116041258045 40.0 38.0 41.0 34.0 41.0 16 38.514054051659265 40.0 38.0 41.0 34.0 41.0 17 38.50957052721918 40.0 38.0 41.0 34.0 41.0 18 38.45859037333379 40.0 37.0 41.0 34.0 41.0 19 38.422782937037624 40.0 37.0 41.0 34.0 41.0 20 38.44651511037609 40.0 37.0 41.0 34.0 41.0 21 38.34156684115956 40.0 37.0 41.0 34.0 41.0 22 38.21588954985643 40.0 37.0 41.0 34.0 41.0 23 38.08425025965075 40.0 36.0 41.0 34.0 41.0 24 37.93578762625735 40.0 35.0 41.0 34.0 41.0 25 37.76715609487806 40.0 35.0 41.0 33.0 41.0 26 37.51426291149343 39.0 35.0 41.0 33.0 41.0 27 37.33086182529571 39.0 35.0 40.0 33.0 41.0 28 37.33066815526767 39.0 35.0 40.0 33.0 41.0 29 37.275077262315925 39.0 35.0 40.0 33.0 41.0 30 37.02794291417696 39.0 35.0 40.0 32.0 41.0 31 36.83957412846905 39.0 35.0 40.0 32.0 41.0 32 36.58932017389797 39.0 35.0 40.0 31.0 41.0 33 36.322547938078756 39.0 35.0 40.0 30.0 41.0 34 36.03418972194427 39.0 35.0 40.0 30.0 41.0 35 35.797183809945146 38.0 35.0 40.0 29.0 41.0 36 35.62936746482769 38.0 35.0 40.0 27.0 41.0 37 35.495448437886665 38.0 35.0 40.0 27.0 41.0 38 35.341588992960155 38.0 35.0 40.0 27.0 41.0 39 35.25455773297207 38.0 35.0 40.0 26.0 41.0 40 35.06918007325284 38.0 34.0 40.0 25.0 41.0 41 34.854086722400595 38.0 34.0 40.0 24.0 41.0 42 34.86297086025568 38.0 34.0 40.0 24.0 41.0 43 34.75441944244551 38.0 34.0 40.0 24.0 41.0 44 34.54411151343 38.0 34.0 40.0 23.0 40.0 45 34.387685624177614 38.0 34.0 40.0 23.0 40.0 46 34.28269621590284 37.0 34.0 40.0 23.0 40.0 47 34.12179249838766 37.0 33.0 40.0 23.0 40.0 48 34.01349930728155 37.0 33.0 39.0 23.0 40.0 49 33.86795817993212 37.0 33.0 39.0 23.0 40.0 50 34.01976889975804 37.0 33.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 3.0 12 3.0 13 6.0 14 13.0 15 22.0 16 81.0 17 202.0 18 574.0 19 1161.0 20 2247.0 21 3805.0 22 6195.0 23 9926.0 24 15204.0 25 22482.0 26 27744.0 27 28183.0 28 27644.0 29 28958.0 30 33511.0 31 43946.0 32 60106.0 33 100612.0 34 115030.0 35 153051.0 36 224960.0 37 439879.0 38 182315.0 39 52143.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.292379717305046 21.892308072052845 26.056023802426193 17.759288408215912 2 36.788001572144935 23.144581005020864 27.704054475708016 12.363362947126182 3 29.355819309661285 23.184390955229944 35.06009783500959 12.399691900099178 4 26.021846738653693 27.011082862291115 32.80928502215497 14.157785376900229 5 16.895558057654174 47.885800505947124 24.653181916282648 10.56545952011605 6 19.994341797219885 39.81298817030557 30.529168541658358 9.66350149081618 7 38.42622216230688 55.62988012078427 5.10168625835202 0.8422114585568291 8 85.61708903821312 2.783975007705662 10.125145015180312 1.4737909389009036 9 80.5043901704233 5.25890075170553 11.624695333628269 2.6120137442429052 10 39.1135608892872 33.817191949149596 17.133784850320282 9.935462311242924 11 30.803660996438627 24.413056397851403 31.1761909915589 13.607091614151075 12 29.040820705224725 24.105715987334232 32.0958704613334 14.757592846107645 13 20.857692402628597 31.089039478939018 32.4232740741022 15.629994044330184 14 16.767710522801483 34.114975439982224 33.23801729992336 15.879296737292936 15 16.366573059486445 26.196592799905318 42.15974992515856 15.27708421544968 16 18.788904099791964 24.07464017564479 40.668427418359535 16.468028306203706 17 19.38466095403375 22.74154481594069 33.497699693735534 24.37609453629003 18 20.90016056890887 24.68267545650114 36.1251564075349 18.292007567055084 19 24.41008172748602 25.343558604487193 31.312582792354714 18.93377687567207 20 25.74937959135624 25.603684034311243 31.186570692408328 17.460365681924195 21 22.488318089729983 26.739818241311593 33.02846126631084 17.743402402647586 22 22.061357956009058 24.848244343221264 32.00992147503144 21.08047622573824 23 19.533521054020646 28.603354288936693 32.02625051661164 19.836874140431025 24 18.853777230100878 25.7114683669123 37.818440044885875 17.616314358100947 25 18.69865133508902 27.12703171568227 35.40199505445229 18.772321894776415 26 18.157008165153698 31.261886814425505 31.807707181044137 18.77339783937666 27 18.47428524050843 29.745058091514785 33.74447075234477 18.036185915632018 28 17.147582257546958 27.816205877568894 37.72806069846526 17.308151166418885 29 18.26726084124944 25.74229101516639 37.119139345585175 18.871308797998996 30 19.50301486006075 27.97993932938272 34.175038465019455 18.342007345537077 31 23.73717331632075 27.023297998046846 30.809167301157526 18.430361384474878 32 24.274639289572768 27.29576514534429 31.147203778211107 17.28239178687183 33 23.30628914935187 27.73816824862168 30.2638532614096 18.691689340616847 34 20.284213930697774 27.857091772378222 32.224287613915635 19.634406683008365 35 20.123581730967015 27.898294121481744 32.19004725928429 19.78807688826695 36 24.156285383545768 27.993420282315206 29.66138757613099 18.188906758008034 37 20.852819006498073 30.8256229244554 30.319106181175147 18.00245188787138 38 20.746490363650288 30.910306093580598 28.729999297471466 19.61320424529765 39 20.55687095057174 30.309865715784806 29.362274977262757 19.770988356380702 40 22.028320127695636 28.18468525772354 29.30607269461464 20.48092191996618 41 18.95846031061888 27.732788525620457 29.998474690302007 23.310276473458664 42 21.137881034704275 28.61740485959872 28.517152139199382 21.727561966497618 43 21.205855417096252 29.329490312384692 28.43993729141706 21.02471697910199 44 20.797059759861824 30.093094524264767 29.381768561784856 19.72807715408856 45 19.13864938573057 32.21719903772578 28.205507950281234 20.438643626262415 46 20.784654751529583 31.201254171658732 29.268224761029536 18.745866315782145 47 21.033577699339308 28.891327696649444 29.76170358738917 20.313391016622077 48 21.41275323463757 27.28715758854233 31.021887877711933 20.27820129910817 49 20.434656302155624 27.573042397913426 31.272772842145635 20.719528457785312 50 19.143649363578767 30.822774835807685 29.69271655125579 20.340859249357756 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 833.0 1 1655.5 2 2478.0 3 15428.0 4 28378.0 5 20842.0 6 13306.0 7 13215.0 8 13124.0 9 13182.5 10 13241.0 11 13145.0 12 13049.0 13 12547.5 14 12046.0 15 11639.5 16 11233.0 17 10778.5 18 10324.0 19 10472.5 20 10621.0 21 11225.5 22 11830.0 23 13339.0 24 14848.0 25 18019.5 26 21191.0 27 24965.5 28 28740.0 29 33528.0 30 38316.0 31 44933.5 32 51551.0 33 57157.0 34 62763.0 35 67070.0 36 71377.0 37 77678.5 38 83980.0 39 94350.5 40 104721.0 41 115225.0 42 125729.0 43 130726.5 44 135724.0 45 134177.0 46 132630.0 47 125138.5 48 117647.0 49 111043.5 50 104440.0 51 95605.5 52 86771.0 53 77022.5 54 67274.0 55 59694.0 56 52114.0 57 47530.5 58 42947.0 59 37973.5 60 33000.0 61 27680.5 62 22361.0 63 18372.5 64 14384.0 65 11788.0 66 9192.0 67 7623.5 68 6055.0 69 5408.0 70 4761.0 71 3937.0 72 3113.0 73 2553.5 74 1994.0 75 1479.0 76 964.0 77 739.5 78 515.0 79 388.0 80 261.0 81 189.5 82 118.0 83 77.0 84 36.0 85 28.5 86 21.0 87 12.0 88 3.0 89 2.5 90 2.0 91 1.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1580007.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.313600241226766 #Duplication Level Percentage of deduplicated Percentage of total 1 70.0114122813701 19.822751396584273 2 7.321022084107769 4.145689852932404 3 3.7868678628795913 3.2165958850776453 4 2.6035414573716418 2.948625281419264 5 1.959707194846014 2.774318305236297 6 1.5798911034959444 2.683944307743288 7 1.358279865166207 2.692045518261636 8 1.1249291381687871 2.5480635134255034 9 0.9742938256488403 2.4827189307225077 >10 9.001388873226665 50.342430953572645 >50 0.2637191205473358 4.618279922901683 >100 0.013819103133712362 0.5515289689693609 >500 2.820225093173298E-4 0.04862909205993663 >1k 5.640450186346596E-4 0.4243267573177393 >5k 2.820225093173298E-4 0.7000513137758037 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8767 0.5548709594324582 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3613 0.2286698729815754 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1701 0.10765775088338217 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004367069259819735 0.0 2 0.0 0.0 0.0 0.017974603909982678 0.0 3 0.0 0.0 0.0 0.02531634353518687 0.0 4 0.0 0.0 0.0 0.037721351867428435 0.0 5 0.0 0.0 0.0 0.07360726882855582 0.0 6 0.0 0.0 0.0 0.13537914705441179 0.0 7 0.0 0.0 0.0 0.1829738729005631 0.0 8 0.0 0.0 0.0 0.4494283886084049 0.0 9 0.0 0.0 0.0 0.6048707379144522 0.0 10 0.0 0.0 0.0 0.8595531538784322 0.0 11 0.0 0.0 0.0 1.0053120017822705 0.0 12 0.0 0.0 0.0 1.1613872596766976 0.0 13 0.0 0.0 0.0 1.2306907501042716 0.0 14 0.0 0.0 0.0 1.2598045451697366 0.0 15 0.0 0.0 0.0 1.293981608942239 0.0 16 0.0 0.0 0.0 1.3619559913342156 0.0 17 0.0 0.0 0.0 1.438284767092804 0.0 18 0.0 0.0 0.0 1.550056423800654 0.0 19 0.0 0.0 0.0 1.6025245457773287 0.0 20 0.0 0.0 0.0 1.664043260567833 0.0 21 0.0 0.0 0.0 1.7318277703832958 0.0 22 0.0 0.0 0.0 1.8072704741181527 0.0 23 0.0 0.0 0.0 1.8879030282777227 0.0 24 0.0 0.0 0.0 1.9535989397515328 0.0 25 0.0 0.0 0.0 2.0097379315408097 0.0 26 0.0 0.0 0.0 2.064864269588679 0.0 27 0.0 0.0 0.0 2.126193111802669 0.0 28 0.0 0.0 0.0 2.188787771193419 0.0 29 0.0 0.0 0.0 2.2552431729732842 0.0 30 0.0 0.0 0.0 2.3475212451590406 0.0 31 0.0 0.0 0.0 2.422141167729004 0.0 32 0.0 0.0 0.0 2.4962547634282632 0.0 33 0.0 0.0 0.0 2.573532902069421 0.0 34 0.0 0.0 0.0 2.6543553288055053 0.0 35 0.0 0.0 0.0 2.747203018720803 0.0 36 0.0 0.0 0.0 2.8311266975399474 0.0 37 0.0 0.0 0.0 2.9150503763590923 0.0 38 0.0 0.0 0.0 2.997961401436829 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCGAC 20 7.857379E-4 44.0 22 CGTTTTA 5605 0.0 43.489742 1 CGTTATT 3125 0.0 42.8736 1 AGGCGAT 1175 0.0 41.753193 7 CGACGGT 165 0.0 41.333332 28 TGCGATA 65 0.0 40.615383 1 TTGCGAA 65 0.0 40.615383 1 CGTTTTT 2760 0.0 40.492752 1 GACGGTC 165 0.0 40.0 29 GACCGAT 540 0.0 39.518517 9 ATGGTCG 45 2.3519533E-8 39.11111 44 GTTTTAT 6595 0.0 39.096287 2 CGTTCGA 40 4.12585E-7 38.5 14 TAGGCGA 340 0.0 38.17647 6 CGACCCG 340 0.0 37.52941 32 GGACCGA 600 0.0 37.4 8 AACGGGA 615 0.0 37.20325 4 AGTACGG 160 0.0 37.125 2 ACGGGAC 350 0.0 37.085712 5 GTTATTT 3845 0.0 37.01951 2 >>END_MODULE