SRR1545703_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545703_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	279274
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1328	0.4755186662560783	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1248	0.44687296346956756	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	339	0.12138616555783925	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGTTTA	25	3.8831968E-5	45.000004	38
AGGTACC	100	0.0	45.000004	7
CTCGTGC	25	3.8831968E-5	45.000004	44
CGTATGG	25	3.8831968E-5	45.000004	2
ATAGGCC	30	2.1595806E-6	45.000004	5
TAGGTAC	25	3.8831968E-5	45.000004	6
AACTTCG	30	2.1595806E-6	45.000004	11
CACGACG	60	0.0	45.000004	26
GTTCGAT	25	3.8831968E-5	45.000004	39
AATTGGT	30	2.1595806E-6	45.000004	13
ATGGTCG	25	3.8831968E-5	45.000004	44
ATACGAA	50	2.1827873E-11	45.000004	19
GATTAGT	25	3.8831968E-5	45.000004	43
TCACGAC	55	1.8189894E-12	45.0	25
CGACGCT	35	1.2075179E-7	45.0	12
CGTGCGA	20	7.0241076E-4	45.0	45
CGGTTTA	20	7.0241076E-4	45.0	1
CAACCCG	20	7.0241076E-4	45.0	23
TGCGCAC	20	7.0241076E-4	45.0	43
TCGCTAT	20	7.0241076E-4	45.0	23