##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545703_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 279274 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.97215995760436 31.0 31.0 33.0 30.0 33.0 2 31.14773305069573 31.0 31.0 33.0 30.0 34.0 3 31.05873801356374 31.0 31.0 34.0 28.0 34.0 4 35.02051748462084 35.0 35.0 37.0 32.0 37.0 5 32.75978071714517 35.0 35.0 37.0 28.0 37.0 6 33.963806154529244 35.0 35.0 37.0 28.0 37.0 7 15.759730587165294 0.0 0.0 35.0 0.0 37.0 8 25.129127666735894 17.0 17.0 35.0 17.0 37.0 9 32.7505854465507 32.0 32.0 37.0 27.0 39.0 10 35.51338828533984 37.0 34.0 37.0 32.0 39.0 11 36.43827925263361 37.0 35.0 39.0 32.0 39.0 12 36.33773283585296 37.0 35.0 39.0 32.0 39.0 13 36.06815886906765 37.0 35.0 39.0 32.0 39.0 14 37.10262681094552 39.0 36.0 40.0 31.0 41.0 15 37.4286435543588 39.0 36.0 41.0 32.0 41.0 16 37.44580949175362 39.0 36.0 41.0 32.0 41.0 17 37.39929245114117 39.0 35.0 41.0 32.0 41.0 18 37.29299182881328 39.0 36.0 40.0 32.0 41.0 19 37.204924196309 39.0 36.0 40.0 32.0 41.0 20 37.2775553757242 39.0 35.0 40.0 32.0 41.0 21 37.14231543215623 39.0 35.0 40.0 32.0 41.0 22 37.18524817920752 39.0 35.0 40.0 32.0 41.0 23 37.149426727872985 39.0 35.0 40.0 32.0 41.0 24 36.93502796536735 39.0 35.0 40.0 32.0 41.0 25 36.69512736595601 38.0 35.0 40.0 31.0 41.0 26 36.57671319206228 38.0 35.0 40.0 31.0 41.0 27 36.47247864104786 38.0 35.0 40.0 31.0 41.0 28 36.360749658041925 38.0 35.0 40.0 31.0 41.0 29 36.311518437090456 38.0 35.0 40.0 30.0 41.0 30 36.02954446171144 38.0 35.0 40.0 30.0 41.0 31 35.84364459276553 38.0 34.0 40.0 30.0 41.0 32 35.676525562709024 38.0 34.0 40.0 29.0 41.0 33 35.408183361143536 38.0 34.0 40.0 27.0 41.0 34 35.159796472281705 38.0 34.0 40.0 25.0 41.0 35 34.9122868580677 38.0 34.0 40.0 24.0 41.0 36 34.696788816717635 38.0 34.0 40.0 23.0 41.0 37 34.54463000494138 38.0 33.0 40.0 23.0 41.0 38 34.41021362532853 38.0 33.0 40.0 23.0 41.0 39 34.319507007455044 37.0 33.0 40.0 23.0 41.0 40 34.12201637101914 37.0 33.0 40.0 21.0 41.0 41 33.942339781003604 37.0 33.0 40.0 21.0 41.0 42 33.88702492892285 37.0 33.0 40.0 20.0 41.0 43 33.80553864663377 37.0 33.0 40.0 20.0 41.0 44 33.57661651281537 37.0 33.0 40.0 19.0 41.0 45 33.505220679332844 36.0 33.0 40.0 20.0 41.0 46 33.47880217993798 36.0 32.0 40.0 20.0 41.0 47 33.406389424006534 36.0 32.0 40.0 20.0 41.0 48 33.34977119244899 36.0 32.0 40.0 20.0 41.0 49 33.22487234758696 36.0 32.0 40.0 18.0 41.0 50 33.10930484040763 36.0 32.0 40.0 18.0 40.0 51 32.909042732227135 35.0 32.0 39.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 5.0 14 4.0 15 15.0 16 36.0 17 110.0 18 218.0 19 435.0 20 721.0 21 1156.0 22 1780.0 23 2643.0 24 3833.0 25 5044.0 26 6060.0 27 6247.0 28 6412.0 29 6926.0 30 8400.0 31 10578.0 32 13656.0 33 20037.0 34 25488.0 35 27893.0 36 32829.0 37 48512.0 38 41548.0 39 8688.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.32211376640862 23.124601645695623 26.839591225821234 16.713693362074522 2 36.072817376483314 22.573888009624955 28.99374807536684 12.359546538524889 3 30.764052507573208 22.542735807844625 33.92868652291298 12.764525161669185 4 26.18682727357362 26.782657891533045 31.787420239621305 15.243094595272028 5 21.085027607296063 35.33160981688234 30.14423111353008 13.439131462291511 6 19.91341836332777 40.22429585281838 30.02212880540258 9.84015697845127 7 37.786188474401484 55.53685627734769 5.857688148556615 0.8192670996942072 8 84.85000393878414 3.38878663964422 10.084003523421444 1.6772058981502038 9 80.53810952684461 4.730479743907416 11.644120111431784 3.087290617816195 10 48.61426412770255 21.947621332454865 17.606365075159164 11.83174946468343 11 40.83659774988004 21.884600786324544 23.169002485014715 14.109798978780697 12 36.11650207323274 21.406933692359477 27.715791659803635 14.760772574604154 13 22.468973123169363 33.68842069079112 27.835029397652484 16.00757678838703 14 17.739567593116437 35.89807858948559 31.33231163660061 15.030042180797354 15 16.178734862536434 22.883619671004105 44.74530389509944 16.19234157136003 16 18.861762999777994 18.83884643754879 43.09101455917844 19.208376003494777 17 19.51452695202561 18.328952927948897 31.15399213675458 31.002527983270912 18 22.5846301481699 22.511941677349125 35.1565129585998 19.746915215881177 19 28.640331717238265 23.36629976295681 27.754105287280588 20.239263232524333 20 29.79403739696499 23.29110479314222 27.087018483639724 19.82783932625307 21 23.59474924267923 25.70199875391193 31.004318339695065 19.69893366371377 22 23.789181950342673 21.637173528506054 29.062855833339302 25.51078868781197 23 20.810028860545557 27.02113336723075 28.163380765842867 24.00545700638083 24 20.498506842742252 23.745497253593246 37.48218595357964 18.273809950084864 25 21.112599096228077 23.01467376125239 34.82279052113695 21.049936621382585 26 18.49044307740785 29.65510573845041 29.739252490385788 22.115198693755953 27 18.704211634452186 29.72242313999871 30.793414352929382 20.77995087261972 28 17.715576817032737 26.591089754148257 37.23619098090048 18.45714244791853 29 18.988878305893138 24.321992022171774 35.944985927798506 20.744143744136583 30 20.889878757062956 27.070189133252647 32.96010369744409 19.07982841224031 31 28.37321053875406 24.24643898107235 28.01012625593503 19.370224224238562 32 29.001983714917966 24.55903521273015 28.510709912129307 17.92827116022258 33 27.618396270329498 24.921761424264343 26.97709059919649 20.482751706209672 34 21.222885051956144 26.306065011422476 29.394071771808335 23.07697816481305 35 21.38723977169375 25.540866675737806 31.06232588783775 22.009567664730696 36 29.21718455710163 25.19568595716035 26.526636922878605 19.060492562859412 37 21.39762383895386 30.88615481570071 28.088185796028277 19.628035549317158 38 22.378739159391852 31.204838259200642 24.873063729527274 21.54335885188023 39 21.807257388800963 28.851951846573616 26.318955577676405 23.02183518694902 40 24.28725910754313 24.634946325114406 27.7279660834879 23.349828483854566 41 19.905182723776647 24.10607503741845 28.642122073662424 27.346620165142475 42 23.193709403668084 25.453855353523778 25.191389101742374 26.161046141065764 43 22.06005571589192 25.882466681466948 26.695288498034188 25.362189104606948 44 21.293067023783095 27.9059275120491 28.9099593947163 21.891046069451505 45 19.25635755566218 33.00056575263003 25.742818880382707 22.000257811325078 46 22.27454041550592 29.051039480939867 27.734053295330035 20.94036680822418 47 21.82444481047287 27.985061265996837 27.43291534478684 22.757578578743455 48 22.714968095848523 25.95300672457873 29.894655428002608 21.43736975157014 49 22.237659073168288 25.320294764281677 30.926616870886658 21.515429291663384 50 20.57191145613269 30.402400509893507 27.591182852682312 21.43450518129149 51 20.230669521688377 31.31763071392253 26.47006165987525 21.981638104513845 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 248.0 1 355.5 2 463.0 3 2595.0 4 4727.0 5 3440.5 6 2154.0 7 2122.5 8 2091.0 9 2114.5 10 2138.0 11 2114.0 12 2090.0 13 2004.0 14 1918.0 15 1829.5 16 1741.0 17 1628.0 18 1515.0 19 1458.0 20 1401.0 21 1440.0 22 1479.0 23 1570.0 24 1661.0 25 1910.5 26 2356.0 27 2552.0 28 2919.5 29 3287.0 30 3844.0 31 4401.0 32 5092.5 33 5784.0 34 6500.5 35 7217.0 36 7936.0 37 8655.0 38 10930.0 39 13205.0 40 16391.0 41 19577.0 42 20645.0 43 21713.0 44 21698.0 45 21683.0 46 21375.0 47 21067.0 48 20216.5 49 19366.0 50 18592.5 51 17819.0 52 16578.5 53 15338.0 54 14354.0 55 13370.0 56 12937.5 57 12505.0 58 11770.0 59 11035.0 60 10055.5 61 9076.0 62 8133.5 63 7191.0 64 6433.5 65 5676.0 66 4892.0 67 4108.0 68 3629.5 69 3151.0 70 2689.5 71 2228.0 72 1870.0 73 1512.0 74 1210.5 75 712.0 76 515.0 77 390.5 78 266.0 79 209.5 80 153.0 81 113.0 82 73.0 83 51.5 84 30.0 85 22.5 86 15.0 87 11.0 88 7.0 89 5.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 279274.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.18286722107852 #Duplication Level Percentage of deduplicated Percentage of total 1 71.98558373337993 36.12442990324035 2 10.144937770927754 10.182041302491438 3 5.396327044230736 8.124094906264384 4 3.3754224285061967 6.775535021791075 5 2.353192263695512 5.904496745735054 6 1.6699305174906758 5.028114085659691 7 1.3018400572278113 4.573104671446116 8 0.902922048325047 3.6248973809664067 9 0.6555924191017728 2.9609556587036936 >10 2.193015732013855 14.899550557155194 >50 0.017696654250607787 0.6195168301196724 >100 0.0021235985100729344 0.2681967928557068 >500 0.0 0.0 >1k 0.001415732340048623 0.9150661435712591 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1328 0.4755186662560783 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1248 0.44687296346956756 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 339 0.12138616555783925 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.007877568266290453 0.0 2 0.0 0.0 0.0 0.024706918653365512 0.0 3 0.0 0.0 0.0 0.03115220178033043 0.0 4 0.0 0.0 0.0 0.03974591261628365 0.0 5 0.0 0.0 0.0 0.07018197182695131 0.0 6 0.0 0.0 0.0 0.11708931013986264 0.0 7 0.0 0.0 0.0 0.14215430007805954 0.0 8 0.0 0.0 0.0 0.295408809985892 0.0 9 0.0 0.0 0.0 0.3695295659459885 0.0 10 0.0 0.0 0.0 0.49413837306731023 0.0 11 0.0 0.0 0.0 0.626266677170091 0.0 12 0.0 0.0 0.0 0.7383429893223142 0.0 13 0.0 0.0 0.0 0.785608398920057 0.0 14 0.0 0.0 0.0 0.8121056739975795 0.0 15 0.0 0.0 0.0 0.8418255906385843 0.0 16 0.0 0.0 0.0 0.8933878556543037 0.0 17 0.0 0.0 0.0 0.961779471057098 0.0 18 0.0 0.0 0.0 1.0774364960576353 0.0 19 0.0 0.0 0.0 1.1318633313520055 0.0 20 0.0 0.0 0.0 1.1737576716772775 0.0 21 0.0 0.0 0.0 1.23391364752895 0.0 22 0.0 0.0 0.0 1.3055279044952268 0.0 23 0.0 0.0 0.0 1.3928972979940846 0.0 24 0.0 0.0 0.0 1.4526952025609259 0.0 25 0.0 0.0 0.0 1.5067639665704649 0.0 26 0.0 0.0 0.0 1.562981158288992 0.0 27 0.0 0.0 0.0 1.633521201400775 0.0 28 0.0 0.0 0.0 1.6915287495434592 0.0 29 0.0 0.0 0.0 1.7717367173456893 0.0 30 0.0 0.0 0.0 1.8655513939715118 0.0 31 0.0 0.0 0.0 1.9396721499316083 0.0 32 0.0 0.0 0.0 2.012002549467548 0.0 33 0.0 0.0 0.0 2.0936428024091036 0.0 34 0.0 0.0 0.0 2.1831606236169496 0.0 35 0.0 0.0 0.0 2.285210939793894 0.0 36 0.0 0.0 0.0 2.3607639808933163 0.0 37 0.0 0.0 0.0 2.4517140872404877 0.0 38 0.0 0.0 0.0 2.55054176185395 0.0 39 0.0 0.0 0.0 2.715970695446049 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTTA 25 3.8831968E-5 45.000004 38 AGGTACC 100 0.0 45.000004 7 CTCGTGC 25 3.8831968E-5 45.000004 44 CGTATGG 25 3.8831968E-5 45.000004 2 ATAGGCC 30 2.1595806E-6 45.000004 5 TAGGTAC 25 3.8831968E-5 45.000004 6 AACTTCG 30 2.1595806E-6 45.000004 11 CACGACG 60 0.0 45.000004 26 GTTCGAT 25 3.8831968E-5 45.000004 39 AATTGGT 30 2.1595806E-6 45.000004 13 ATGGTCG 25 3.8831968E-5 45.000004 44 ATACGAA 50 2.1827873E-11 45.000004 19 GATTAGT 25 3.8831968E-5 45.000004 43 TCACGAC 55 1.8189894E-12 45.0 25 CGACGCT 35 1.2075179E-7 45.0 12 CGTGCGA 20 7.0241076E-4 45.0 45 CGGTTTA 20 7.0241076E-4 45.0 1 CAACCCG 20 7.0241076E-4 45.0 23 TGCGCAC 20 7.0241076E-4 45.0 43 TCGCTAT 20 7.0241076E-4 45.0 23 >>END_MODULE