##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545701_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 345757 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.92616779992885 31.0 31.0 33.0 30.0 33.0 2 31.106262490708794 31.0 31.0 33.0 30.0 34.0 3 31.00299343180326 31.0 31.0 34.0 28.0 34.0 4 34.98933933369389 35.0 35.0 37.0 32.0 37.0 5 32.74971728699636 35.0 35.0 37.0 28.0 37.0 6 33.94159481948305 35.0 35.0 37.0 28.0 37.0 7 15.162298955624903 0.0 0.0 35.0 0.0 37.0 8 24.818942205074663 17.0 17.0 35.0 17.0 37.0 9 32.5759044646963 32.0 32.0 37.0 27.0 39.0 10 35.30341540446036 37.0 34.0 37.0 32.0 39.0 11 36.287473572480096 37.0 35.0 39.0 32.0 39.0 12 36.337173217028145 37.0 35.0 39.0 32.0 39.0 13 36.2144598663223 38.0 35.0 39.0 32.0 39.0 14 37.28759793727965 39.0 36.0 40.0 32.0 41.0 15 37.537371622266505 39.0 36.0 41.0 32.0 41.0 16 37.51067657343163 39.0 36.0 41.0 32.0 41.0 17 37.42531893786677 39.0 36.0 41.0 32.0 41.0 18 37.344421081858066 39.0 36.0 40.0 32.0 41.0 19 37.29576552318536 39.0 36.0 40.0 32.0 41.0 20 37.38662991638636 39.0 35.0 40.0 32.0 41.0 21 37.2740016832631 39.0 35.0 40.0 32.0 41.0 22 37.28572089646775 39.0 35.0 40.0 32.0 41.0 23 37.24349181650697 39.0 35.0 40.0 32.0 41.0 24 37.06152586932441 39.0 35.0 40.0 32.0 41.0 25 36.79761798025781 38.0 35.0 40.0 31.0 41.0 26 36.661059645936305 38.0 35.0 40.0 31.0 41.0 27 36.59668784724532 38.0 35.0 40.0 31.0 41.0 28 36.47012497216253 38.0 35.0 40.0 30.0 41.0 29 36.401935463345644 38.0 35.0 40.0 30.0 41.0 30 36.098783249507605 38.0 35.0 40.0 30.0 41.0 31 35.964642798265835 38.0 35.0 40.0 30.0 41.0 32 35.85757916687153 38.0 35.0 40.0 29.0 41.0 33 35.622726365626725 38.0 34.0 40.0 27.0 41.0 34 35.37233953325602 38.0 34.0 40.0 26.0 41.0 35 35.139164210702894 38.0 34.0 40.0 25.0 41.0 36 34.928469994822954 38.0 34.0 40.0 24.0 41.0 37 34.80573350647998 38.0 34.0 40.0 24.0 41.0 38 34.65190003383879 38.0 33.0 40.0 23.0 41.0 39 34.49522930844495 38.0 33.0 40.0 23.0 41.0 40 34.34923949478969 38.0 33.0 40.0 22.0 41.0 41 34.152558010394586 38.0 33.0 40.0 21.0 41.0 42 34.09262574582727 37.0 33.0 40.0 21.0 41.0 43 34.00573813400741 37.0 33.0 40.0 21.0 41.0 44 33.78166168725434 37.0 33.0 40.0 20.0 41.0 45 33.69035478674329 37.0 33.0 40.0 20.0 41.0 46 33.62897063544628 37.0 33.0 40.0 20.0 41.0 47 33.52815705828082 37.0 32.0 40.0 20.0 41.0 48 33.456815046405424 36.0 32.0 40.0 20.0 41.0 49 33.321289229140696 36.0 32.0 40.0 19.0 41.0 50 33.20956336386537 36.0 32.0 40.0 18.0 41.0 51 33.0348568503313 36.0 32.0 40.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 2.0 13 4.0 14 12.0 15 23.0 16 52.0 17 125.0 18 270.0 19 514.0 20 878.0 21 1534.0 22 2200.0 23 3361.0 24 4592.0 25 5979.0 26 6897.0 27 7238.0 28 7653.0 29 8669.0 30 10403.0 31 13029.0 32 16829.0 33 23571.0 34 29268.0 35 34678.0 36 42932.0 37 62847.0 38 50935.0 39 11260.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.613615921008105 21.819081030897422 26.191516006906586 17.375787041187888 2 36.213294307852046 22.528828049757486 29.099338552798642 12.158539089591823 3 31.167554091457294 23.26286958760054 33.20655836324355 12.363017957698615 4 27.02013263650483 26.847757239911267 31.289026686372225 14.843083437211682 5 20.697773291647025 35.5032580685279 29.712196716190853 14.086771923634227 6 19.81420477387298 40.71501083130638 29.679514803749452 9.791269591071186 7 36.36311050824712 57.10079622393762 5.661201363963709 0.8748919038515488 8 84.90327021578739 3.3697076270328585 9.544853755672337 2.1821684015074174 9 79.9954881607603 4.937282542363568 11.395575505340457 3.6716537915356744 10 41.891848899660744 26.32397897945667 18.985298923810653 12.798873197071932 11 34.71108321740413 24.37954979942561 25.79991149853799 15.109455484632269 12 31.51346176650075 22.65348206977733 29.312494034827928 16.520562128893992 13 23.417313315420945 29.156314984223027 30.036991297356234 17.389380402999794 14 18.65356305150727 32.36897589925873 31.79371639619733 17.18374465303667 15 17.789661525290885 23.627865813273484 40.314440488551206 18.268032172884425 16 20.57832523998068 20.646581269504306 38.86313219978193 19.91196129073309 17 20.408552827563867 20.984390771553432 31.626546967957264 26.980509432925437 18 22.57105423751363 23.28658566565536 33.69910081357717 20.443259283253845 19 26.761569541614488 25.153792981776217 27.957206940134256 20.12743053647504 20 27.831685258722167 24.459953088440724 27.718889277729737 19.989472375107372 21 23.672984205670456 26.328317286417917 30.347903296245633 19.650795211665997 22 23.265472571777288 23.218618856595818 29.766280942974397 23.74962762865249 23 21.5550227471895 27.108923318978356 28.641213337690925 22.694840596141223 24 21.308317691326568 24.415123916507834 34.466981145717945 19.80957724644765 25 21.779747047782113 24.965510459658084 32.14540848052245 21.109334012037355 26 19.83878851332005 28.0439730793592 29.66274001683263 22.454498390488116 27 20.177176456297342 27.306460895947154 30.547176195998926 21.96918645175658 28 19.864818355087532 26.03822916094251 34.250644238583746 19.84630824538621 29 20.006536382488278 24.649392492415192 34.256428647865405 21.08764247723112 30 21.5807633684929 26.248203217866884 31.79458405758958 20.376449356050635 31 26.159990976321524 25.134125990218564 27.861764186986814 20.8441188464731 32 26.318483790639092 25.045335307745038 27.69748696338758 20.93869393822829 33 25.5130047981675 25.17461685519021 27.87882819436772 21.433550152274574 34 21.05293602154114 26.285512657733612 29.711618275262687 22.949933045462565 35 21.71438322289932 24.86688628140573 31.237834664229503 22.180895831465453 36 26.10041156072039 25.692899926827224 27.343770335813883 20.862918176638505 37 22.059423236550526 29.155447322830774 28.095454321966006 20.689675118652694 38 22.830195773332136 28.871432827101113 26.85643385383376 21.441937545732987 39 22.371781337760336 28.292702678470715 26.660631599649463 22.67488438411948 40 23.981003999919018 25.23448549125542 28.39161607718716 22.392894431638403 41 20.829657823268942 25.0219084501543 28.70542028071738 25.443013445859375 42 22.612701984341605 26.928160528926387 25.823338356128726 24.635799130603285 43 22.054795709125194 26.18920224319392 27.572832943367743 24.183169104313144 44 21.933901555138434 27.36951095711728 28.600144031791114 22.096443455953168 45 20.847011051113935 29.528252501033965 26.81247234329312 22.81226410455898 46 22.50597963309492 28.378601156303418 28.124954809302487 20.990464401299178 47 22.031079631070376 27.61795133576471 27.84643550239041 22.504533530774502 48 21.871140714432393 26.395416434085213 29.308444948330763 22.424997903151635 49 21.979309167999492 25.647203093502085 30.164826742480994 22.208660996017436 50 21.152427861185746 28.19754914578736 28.68315030498298 21.966872688043914 51 20.746362329612992 29.04236212137426 27.585269423323318 22.62600612568943 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 265.0 1 360.0 2 455.0 3 2969.0 4 5483.0 5 3925.5 6 2368.0 7 2309.5 8 2251.0 9 2309.0 10 2367.0 11 2317.0 12 2267.0 13 2248.0 14 2229.0 15 2113.0 16 1997.0 17 1945.5 18 1894.0 19 1871.0 20 1848.0 21 1870.5 22 1893.0 23 2080.5 24 2268.0 25 2503.0 26 3282.5 27 3827.0 28 4378.0 29 4929.0 30 5651.0 31 6373.0 32 7339.0 33 8305.0 34 9062.5 35 9820.0 36 10971.5 37 12123.0 38 14136.0 39 16149.0 40 18823.5 41 21498.0 42 22779.5 43 24061.0 44 24551.5 45 25042.0 46 25693.0 47 26344.0 48 25578.0 49 24812.0 50 23635.5 51 22459.0 52 20916.5 53 19374.0 54 18308.0 55 17242.0 56 16387.0 57 15532.0 58 14736.0 59 13940.0 60 12846.0 61 11752.0 62 10519.0 63 9286.0 64 8128.0 65 6970.0 66 5931.0 67 4892.0 68 4294.0 69 3696.0 70 3292.0 71 2888.0 72 2363.5 73 1839.0 74 1447.0 75 798.5 76 542.0 77 430.0 78 318.0 79 245.5 80 173.0 81 133.0 82 93.0 83 74.0 84 55.0 85 40.0 86 25.0 87 18.0 88 11.0 89 8.0 90 5.0 91 4.0 92 3.0 93 1.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 345757.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.50362657259579 #Duplication Level Percentage of deduplicated Percentage of total 1 68.085942006093 33.02415105906948 2 11.7476812652918 11.396102903711862 3 6.325294118100546 9.203991115985566 4 4.0076196675716 7.7753635120353355 5 2.698614166957871 6.544628690882064 6 1.9854144419151825 5.777988040949562 7 1.358630017127389 4.612893810074642 8 1.0142534623926633 3.9355976951884863 9 0.7511318051845598 3.2789354926924497 >10 2.00572746655478 12.821734994637168 >50 0.014321151135001002 0.4604803237025816 >100 0.004177002414375291 0.34239360335647634 >500 0.0 0.0 >1k 0.0011934292612500832 0.8257387577143085 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1463 0.42312953895365824 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1390 0.40201644507558776 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.00607362974574629 0.0 2 0.0 0.0 0.0 0.030946589656897762 0.0 3 0.0 0.0 0.0 0.04222618775614087 0.0 4 0.0 0.0 0.0 0.06970213184404075 0.0 5 0.0 0.0 0.0 0.1376689409035826 0.0 6 0.0 0.0 0.0 0.25104336282418 0.0 7 0.0 0.0 0.0 0.3273975653421333 0.0 8 0.0 0.0 0.0 0.8156017087145018 0.0 9 0.0 0.0 0.0 1.0628852055056008 0.0 10 0.0 0.0 0.0 1.4148665102948024 0.0 11 0.0 0.0 0.0 1.5904233319932786 0.0 12 0.0 0.0 0.0 1.770318460653002 0.0 13 0.0 0.0 0.0 1.8472511040991217 0.0 14 0.0 0.0 0.0 1.883114441645433 0.0 15 0.0 0.0 0.0 1.9247621884734076 0.0 16 0.0 0.0 0.0 1.9883906905717021 0.0 17 0.0 0.0 0.0 2.0661909954100715 0.0 18 0.0 0.0 0.0 2.205884479562236 0.0 19 0.0 0.0 0.0 2.259679485881703 0.0 20 0.0 0.0 0.0 2.3293816177257436 0.0 21 0.0 0.0 0.0 2.4100741272049446 0.0 22 0.0 0.0 0.0 2.492212739004561 0.0 23 0.0 0.0 0.0 2.5841848465830046 0.0 24 0.0 0.0 0.0 2.6588037263164592 0.0 25 0.0 0.0 0.0 2.7146232758845086 0.0 26 0.0 0.0 0.0 2.782011644015884 0.0 27 0.0 0.0 0.0 2.84853235075501 0.0 28 0.0 0.0 0.0 2.9086902072843066 0.0 29 0.0 0.0 0.0 2.9890934962994242 0.0 30 0.0 0.0 0.0 3.095815847546109 0.0 31 0.0 0.0 0.0 3.180846663986557 0.0 32 0.0 0.0 0.0 3.263852937178423 0.0 33 0.0 0.0 0.0 3.3514867377956197 0.0 34 0.0 0.0 0.0 3.4434588453740633 0.0 35 0.0 0.0 0.0 3.5490243147644156 0.0 36 0.0 0.0 0.0 3.631162926564032 0.0 37 0.0 0.0 0.0 3.716772183932646 0.0 38 0.0 0.0 0.0 3.8243621965715806 0.0 39 0.0 0.0 0.0 3.980252026712402 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGCGATA 25 3.8851285E-5 45.000004 7 AGGCCGA 20 7.026438E-4 45.0 7 AGTACGG 20 7.026438E-4 45.0 2 CGTTTTA 840 0.0 43.660713 1 AGGCGAT 250 0.0 43.2 7 CGTTATT 220 0.0 42.954544 1 CGTTTTT 1220 0.0 42.78688 1 TAGGTAC 75 0.0 42.0 6 ACGGGCT 60 3.6379788E-12 41.249996 5 CAACCCG 55 6.002665E-11 40.909092 23 GTTAGGT 55 6.002665E-11 40.909092 4 GACCCGA 45 1.9215804E-8 40.0 40 GTTTTAT 1000 0.0 39.825 2 GTAAGGT 85 0.0 39.705883 4 GTAAGGC 85 0.0 39.705883 4 GACGTCG 40 3.4488767E-7 39.375 19 TCGCTAT 40 3.4488767E-7 39.375 23 GGCGATA 80 0.0 39.375 8 GTACGGG 75 0.0 39.0 3 GCGACGT 35 6.235623E-6 38.57143 17 >>END_MODULE