##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545698_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 747880 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.515672300369044 31.0 31.0 33.0 30.0 34.0 2 31.70014975664545 31.0 31.0 34.0 30.0 34.0 3 31.755514253623577 31.0 31.0 34.0 30.0 34.0 4 35.64774027918917 37.0 35.0 37.0 33.0 37.0 5 27.043141947906083 35.0 25.0 37.0 0.0 37.0 6 31.301965555971545 35.0 26.0 37.0 17.0 37.0 7 15.013413916671123 0.0 0.0 32.0 0.0 37.0 8 25.11184949457132 17.0 17.0 35.0 17.0 37.0 9 33.25638872546398 32.0 32.0 37.0 28.0 39.0 10 36.10498208268706 37.0 35.0 39.0 32.0 39.0 11 37.042857142857144 39.0 37.0 39.0 34.0 39.0 12 36.87192330320372 39.0 35.0 39.0 33.0 39.0 13 36.257076001497566 39.0 35.0 39.0 32.0 39.0 14 37.4756217575012 40.0 35.0 41.0 33.0 41.0 15 37.81406375354335 40.0 36.0 41.0 33.0 41.0 16 37.93335027009681 40.0 35.0 41.0 33.0 41.0 17 37.98280472803123 40.0 35.0 41.0 34.0 41.0 18 37.96900438573033 40.0 36.0 41.0 33.0 41.0 19 37.889253623575975 40.0 36.0 41.0 34.0 41.0 20 37.90065785954966 40.0 36.0 41.0 34.0 41.0 21 37.73791116221854 40.0 35.0 41.0 33.0 41.0 22 37.685849334117776 39.0 35.0 41.0 33.0 41.0 23 37.597529015350055 39.0 35.0 41.0 33.0 41.0 24 37.43778413649248 39.0 35.0 41.0 33.0 41.0 25 37.268870674439746 39.0 35.0 41.0 33.0 41.0 26 37.03341311440338 39.0 35.0 40.0 33.0 41.0 27 36.78482376851901 38.0 35.0 40.0 32.0 41.0 28 36.83541343531048 38.0 35.0 40.0 32.0 41.0 29 36.75387094186233 38.0 35.0 40.0 32.0 41.0 30 36.55456891479916 38.0 35.0 40.0 32.0 41.0 31 36.33136733165748 38.0 35.0 40.0 31.0 41.0 32 36.08871342996203 38.0 35.0 40.0 31.0 41.0 33 35.89280766967963 38.0 35.0 40.0 30.0 41.0 34 35.65148152109964 38.0 35.0 40.0 30.0 41.0 35 35.44790340696368 38.0 34.0 40.0 29.0 41.0 36 35.22201155265551 38.0 34.0 40.0 27.0 41.0 37 35.05972615927689 38.0 34.0 40.0 27.0 41.0 38 34.873041129592984 37.0 34.0 40.0 27.0 41.0 39 34.82683318179387 37.0 34.0 40.0 26.0 41.0 40 34.55455821789592 37.0 34.0 40.0 25.0 40.0 41 34.36521233352944 37.0 34.0 40.0 24.0 40.0 42 34.37567791624325 37.0 33.0 40.0 24.0 40.0 43 34.24274482537305 36.0 33.0 40.0 24.0 40.0 44 34.02960635396053 36.0 33.0 40.0 23.0 40.0 45 33.73420201101781 36.0 33.0 39.0 23.0 40.0 46 33.77346766860994 36.0 33.0 39.0 23.0 40.0 47 33.61340455688078 35.0 33.0 39.0 23.0 40.0 48 33.57916778092742 35.0 33.0 39.0 23.0 40.0 49 33.5003677060491 35.0 33.0 39.0 23.0 40.0 50 33.496297534363805 35.0 33.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 5.0 14 7.0 15 12.0 16 53.0 17 126.0 18 311.0 19 641.0 20 1112.0 21 1931.0 22 3123.0 23 4664.0 24 7000.0 25 9876.0 26 12590.0 27 13883.0 28 14474.0 29 16195.0 30 19982.0 31 26623.0 32 37002.0 33 69436.0 34 67645.0 35 80219.0 36 97258.0 37 169995.0 38 76481.0 39 17234.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.375381077178154 22.60777130020859 29.053056640102692 15.963790982510565 2 32.88281542493448 23.4613841792801 31.0589934214045 12.596806974380916 3 29.97352516446489 23.41592234048243 33.93565812697224 12.674894368080441 4 26.124913087661124 26.67205968872012 32.00700647162647 15.196020751992299 5 16.992966786115417 48.10718297053003 23.65967802321228 11.24017222014227 6 20.052682248489063 40.18519013745521 28.974701823822002 10.787425790233728 7 39.02577953682409 55.70572819168851 4.327432208375676 0.9410600631117292 8 87.42445312082152 2.7234315665614806 8.130315023800609 1.7218002888163875 9 83.82882280579771 3.6480451409317003 9.703160934909343 2.8199711183612344 10 55.729796223993155 18.318580520939186 14.63189281702947 11.319730438038187 11 49.150933304808255 18.59362464566508 19.00652511098037 13.24891693854629 12 42.659784992244745 19.30657324704498 24.317804995453816 13.715836765256459 13 23.190083970690484 38.01719527196877 24.979007327378724 13.813713429962027 14 17.18644702358667 39.99612237257314 29.48828689094507 13.329143712895117 15 14.394287853666363 21.019682301973578 49.39522383270044 15.190806011659625 16 17.208241963951437 14.602743755682729 47.44223672246884 20.74677755789699 17 17.3111996576991 15.550355672032948 30.18264962293416 36.955795047333794 18 22.55615874204418 20.506498368722255 35.81978392255442 21.117558966679145 19 31.09362464566508 22.35358613681339 25.62737337540782 20.925415842113708 20 31.503316040006418 22.759801037599615 23.963470075413166 21.7734128469808 21 23.44319944376103 26.391533401080387 29.64178745253249 20.52347970262609 22 23.130849868962937 21.723538535593946 26.602663528908383 28.54294806653474 23 19.843958923891535 29.245868321121037 25.520003209070975 25.390169545916457 24 20.82259185965663 23.25159116435792 38.49334117772904 17.432475798256405 25 18.955714820559447 22.14833930577098 36.39367278172969 22.502273091939884 26 17.162245279991442 31.201663368454835 28.12416430443387 23.51192704711986 27 18.80756271059528 30.30593143285019 30.37679841685832 20.50970743969621 28 16.850965395517996 26.097903406963685 38.81692250093598 18.23420869658234 29 17.14446167834412 23.778012515376798 37.75899876985613 21.318527036422953 30 20.53404289458202 27.37859014815211 33.17042841097502 18.916938546290847 31 31.24017222014227 23.125100283467937 25.37024656361983 20.264480932769963 32 31.3540942397176 24.195191741990694 26.272664063753542 18.17804995453816 33 29.246804300155105 23.574637642402525 25.513451355832483 21.665106701609886 34 20.207252500401136 25.94119377440231 29.141439803176983 24.710113922019573 35 21.33644434936086 23.745253249184362 31.369872172006204 23.548430229448574 36 32.802321228004494 22.109696742792963 25.51786382842167 19.570118200780872 37 21.4840616141627 30.426405305664012 27.673557255174625 20.415975824998664 38 22.587046050168478 31.991495961919025 22.578221104990106 22.843236882922394 39 21.93587206503717 29.046371075573624 25.198427555222764 23.819329304166445 40 25.317965449002518 22.573273787238595 25.726319730438043 26.382441033320852 41 19.12017970797454 21.473097288335026 26.942423918275658 32.46429908541477 42 22.92747499598866 24.41541423757822 24.074049312723965 28.583061453709153 43 22.672621276140557 25.137856340589398 25.40902283788843 26.780499545381613 44 21.31906188158528 28.067604428517946 28.461384179280095 22.151949510616674 45 18.66729956677542 34.623201583141686 23.358292774241857 23.351206075841045 46 23.664224207092047 29.10841311440338 26.69091298069209 20.536449697812483 47 22.635716959940098 26.120099481200192 27.046852436219716 24.197331122639994 48 23.74217788950099 23.596298871476705 30.098144087286734 22.56337915173557 49 22.5330266887736 22.491843611274536 31.715916992030806 23.259212707921055 50 20.937717280847195 30.278386906990427 26.718992351714178 22.0649034604482 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 452.0 1 834.5 2 1217.0 3 5526.5 4 9836.0 5 6957.5 6 4079.0 7 4286.0 8 4493.0 9 4736.0 10 4979.0 11 4987.5 12 4996.0 13 4773.0 14 4550.0 15 4221.5 16 3893.0 17 3557.0 18 3221.0 19 3097.5 20 2974.0 21 2928.5 22 2883.0 23 2987.0 24 3091.0 25 3477.5 26 3864.0 27 4316.5 28 4769.0 29 5494.5 30 6220.0 31 7295.5 32 8371.0 33 9300.0 34 10229.0 35 11643.5 36 13058.0 37 17336.0 38 21614.0 39 31897.0 40 42180.0 41 53693.5 42 65207.0 43 68816.0 44 72425.0 45 70479.0 46 68533.0 47 65064.0 48 61595.0 49 59193.0 50 56791.0 51 52359.5 52 47928.0 53 43316.5 54 38705.0 55 36668.0 56 34631.0 57 33202.5 58 31774.0 59 29709.0 60 27644.0 61 25524.5 62 23405.0 63 20684.5 64 17964.0 65 15350.5 66 12737.0 67 11125.0 68 9513.0 69 8340.5 70 7168.0 71 6053.0 72 4938.0 73 3933.5 74 2929.0 75 2294.0 76 1659.0 77 1185.5 78 712.0 79 551.5 80 391.0 81 285.0 82 179.0 83 113.5 84 48.0 85 35.5 86 23.0 87 15.5 88 8.0 89 5.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 747880.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.712051279233464 #Duplication Level Percentage of deduplicated Percentage of total 1 69.86829440271188 18.6632546287782 2 7.275138167741854 3.88667727600458 3 3.6443300929255296 2.9204259696204113 4 2.48785360682685 2.6582269248313897 5 1.9147727617407078 2.557375409984863 6 1.540950642968983 2.469717155625315 7 1.3206062141639376 2.4693270638695033 8 1.121249904220428 2.3960707950697344 9 0.9664838217052515 2.323508886534619 >10 9.473865371384885 50.634535279705325 >50 0.3340898356140466 5.667162517462902 >100 0.05027057087586121 2.1839172747083873 >500 0.0 0.0 >1k 0.0020946071198275507 1.1698008178047938 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3452 0.4615713750869123 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2011 0.2688934053591485 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1503 0.20096806974380918 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1397 0.18679467294218322 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009226079050114992 0.0 2 0.0 0.0 0.0 0.03516606942290207 0.0 3 0.0 0.0 0.0 0.04653152912231909 0.0 4 0.0 0.0 0.0 0.06378028560731668 0.0 5 0.0 0.0 0.0 0.11298604054126331 0.0 6 0.0 0.0 0.0 0.2007006471626464 0.0 7 0.0 0.0 0.0 0.2598010375996149 0.0 8 0.0 0.0 0.0 0.5808418462855004 0.0 9 0.0 0.0 0.0 0.7219072578488528 0.0 10 0.0 0.0 0.0 0.9718136599454458 0.0 11 0.0 0.0 0.0 1.1658287425790235 0.0 12 0.0 0.0 0.0 1.3351072364550463 0.0 13 0.0 0.0 0.0 1.4121249398299192 0.0 14 0.0 0.0 0.0 1.4391346205273574 0.0 15 0.0 0.0 0.0 1.481253677060491 0.0 16 0.0 0.0 0.0 1.5697705514253624 0.0 17 0.0 0.0 0.0 1.6791463871209285 0.0 18 0.0 0.0 0.0 1.8520350858426486 0.0 19 0.0 0.0 0.0 1.9119377440231053 0.0 20 0.0 0.0 0.0 1.984944108680537 0.0 21 0.0 0.0 0.0 2.0745306733700595 0.0 22 0.0 0.0 0.0 2.1635823928972564 0.0 23 0.0 0.0 0.0 2.2779055463443334 0.0 24 0.0 0.0 0.0 2.362945927154089 0.0 25 0.0 0.0 0.0 2.420040648232337 0.0 26 0.0 0.0 0.0 2.493314435470931 0.0 27 0.0 0.0 0.0 2.5700647162646413 0.0 28 0.0 0.0 0.0 2.6457453067337005 0.0 29 0.0 0.0 0.0 2.7333262020645024 0.0 30 0.0 0.0 0.0 2.839626678076697 0.0 31 0.0 0.0 0.0 2.9375033427822643 0.0 32 0.0 0.0 0.0 3.0245493929507408 0.0 33 0.0 0.0 0.0 3.115874204417821 0.0 34 0.0 0.0 0.0 3.211745199764668 0.0 35 0.0 0.0 0.0 3.3371663903299993 0.0 36 0.0 0.0 0.0 3.438920682462427 0.0 37 0.0 0.0 0.0 3.5309140503824143 0.0 38 0.0 0.0 0.0 3.6488474086751888 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAC 205 0.0 44.0 25 CGGGTAT 20 7.8547164E-4 44.0 6 GGTACGT 20 7.8547164E-4 44.0 8 GTCGATA 20 7.8547164E-4 44.0 1 GCGAATC 20 7.8547164E-4 44.0 25 CGGTTTA 25 4.4413435E-5 44.0 28 TAGGTAT 30 2.5265272E-6 44.0 6 CTATACG 20 7.8547164E-4 44.0 1 CGTTCGA 25 4.4413435E-5 44.0 14 ACTACGG 25 4.4413435E-5 44.0 2 ATGGTCG 60 0.0 44.0 44 TTACGTA 20 7.8547164E-4 44.0 1 CGTAAAG 45 4.783942E-10 44.0 2 CGTAAAA 25 4.4413435E-5 44.0 32 ATAACGG 70 0.0 44.0 2 CATCCGT 25 4.4413435E-5 44.0 40 TATAAGT 25 4.4413435E-5 44.0 16 TGTCCGA 25 4.4413435E-5 44.0 10 CGTTTTA 2025 0.0 43.674076 1 CGTTATT 1100 0.0 43.0 1 >>END_MODULE