SRR1545697_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545697_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	287309
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	870	0.3028098667288529	No Hit
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	860	0.29932929354806154	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	752	0.26173910319551424	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGTGCAA	30	2.159799E-6	45.000004	1
ACGGGCT	30	2.159799E-6	45.000004	5
TGGTTCG	30	2.159799E-6	45.000004	37
GGCTTAT	30	2.159799E-6	45.000004	45
ATATCAC	30	2.159799E-6	45.000004	30
TAGGATG	70	0.0	45.000004	6
AGGATCA	45	3.8198777E-10	45.000004	7
TGGGACC	30	2.159799E-6	45.000004	6
CAATAAG	30	2.159799E-6	45.000004	2
GTAGTAA	30	2.159799E-6	45.000004	1
TAATCAC	20	7.024446E-4	45.0	16
TGATAAA	20	7.024446E-4	45.0	1
TTGGAAT	20	7.024446E-4	45.0	32
GATCGAC	20	7.024446E-4	45.0	9
TATGGTA	20	7.024446E-4	45.0	1
ATTAACA	25	3.883479E-5	45.0	23
TCTAGTC	20	7.024446E-4	45.0	30
TGTGACG	20	7.024446E-4	45.0	43
ACAGGTA	25	3.883479E-5	45.0	5
AGGCAAT	25	3.883479E-5	45.0	7