SRR1545695_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545695_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	383665
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1232	0.3211134713877992	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1186	0.309123845021047	No Hit
GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC	680	0.1772379549867723	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGTAC	20	7.0274057E-4	45.0	6
CGACGGT	75	0.0	45.0	28
CCGATGT	20	7.0274057E-4	45.0	11
GCGAATA	20	7.0274057E-4	45.0	1
AACCCGA	20	7.0274057E-4	45.0	24
CACGACG	75	0.0	45.0	26
TAACGCC	25	3.8859303E-5	45.0	12
TATGCAC	25	3.8859303E-5	45.0	15
ACGGGAT	40	6.7939254E-9	45.0	5
TAACCGG	20	7.0274057E-4	45.0	16
AACGCCG	25	3.8859303E-5	45.0	13
AGCGCAA	20	7.0274057E-4	45.0	14
ACGCTTG	20	7.0274057E-4	45.0	32
AGCGAAA	40	6.7939254E-9	45.0	1
CGTAAAT	20	7.0274057E-4	45.0	16
CGATGAT	20	7.0274057E-4	45.0	10
CGGTCTA	75	0.0	45.0	31
ACGTAAG	20	7.0274057E-4	45.0	2
CGACTAG	35	1.2091004E-7	45.0	2
CGGTAAG	20	7.0274057E-4	45.0	2