##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545693_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 555290 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.99325397540024 31.0 31.0 33.0 30.0 33.0 2 31.147605755551155 31.0 31.0 33.0 30.0 34.0 3 31.084391939347007 31.0 31.0 34.0 28.0 34.0 4 35.06486160384664 35.0 35.0 37.0 32.0 37.0 5 32.782207495182696 35.0 35.0 37.0 28.0 37.0 6 33.96404221217742 35.0 35.0 37.0 28.0 37.0 7 15.485490464442003 0.0 0.0 35.0 0.0 37.0 8 25.003522483747233 17.0 17.0 35.0 17.0 37.0 9 32.71476705865404 32.0 32.0 37.0 27.0 39.0 10 35.47990419420483 37.0 34.0 37.0 32.0 39.0 11 36.40604368888329 37.0 35.0 39.0 32.0 39.0 12 36.2774658286661 37.0 35.0 39.0 32.0 39.0 13 35.98622341479227 37.0 35.0 39.0 31.0 39.0 14 37.056851374957226 39.0 35.0 40.0 31.0 41.0 15 37.39426605917629 39.0 36.0 41.0 32.0 41.0 16 37.4235876749086 39.0 35.0 41.0 32.0 41.0 17 37.379236074843774 39.0 35.0 41.0 32.0 41.0 18 37.3128293324209 39.0 36.0 40.0 32.0 41.0 19 37.23998451259702 39.0 36.0 40.0 32.0 41.0 20 37.34462713176899 39.0 35.0 40.0 32.0 41.0 21 37.182756757730196 39.0 35.0 40.0 32.0 41.0 22 37.2462154910047 39.0 35.0 40.0 32.0 41.0 23 37.23024005474617 39.0 35.0 40.0 32.0 41.0 24 37.06902519404275 39.0 35.0 40.0 32.0 41.0 25 36.80726107079184 38.0 35.0 40.0 31.0 41.0 26 36.70237893713195 38.0 35.0 40.0 31.0 41.0 27 36.61930882962056 38.0 35.0 40.0 31.0 41.0 28 36.51708836824002 38.0 35.0 40.0 31.0 41.0 29 36.52418736155882 38.0 35.0 40.0 31.0 41.0 30 36.273934340614815 38.0 35.0 40.0 30.0 41.0 31 36.12178501323633 38.0 35.0 40.0 30.0 41.0 32 36.00583839075078 38.0 35.0 40.0 30.0 41.0 33 35.82113490248339 38.0 35.0 40.0 29.0 41.0 34 35.66140575194943 38.0 35.0 40.0 28.0 41.0 35 35.49307028759747 38.0 34.0 40.0 27.0 41.0 36 35.30678024095518 38.0 34.0 40.0 26.0 41.0 37 35.15275621747195 38.0 34.0 40.0 26.0 41.0 38 35.046599074357545 38.0 34.0 40.0 25.0 41.0 39 34.944709971366315 38.0 34.0 40.0 25.0 41.0 40 34.79231752777828 38.0 34.0 40.0 24.0 41.0 41 34.656033784148825 38.0 34.0 40.0 24.0 41.0 42 34.6121702173639 38.0 33.0 40.0 23.0 41.0 43 34.523544454249134 38.0 33.0 40.0 23.0 41.0 44 34.203427038124225 37.0 33.0 40.0 23.0 41.0 45 34.15437339048065 37.0 33.0 40.0 23.0 41.0 46 34.16082407390733 37.0 33.0 40.0 23.0 41.0 47 34.10504421113292 37.0 33.0 40.0 23.0 41.0 48 34.08374182859407 37.0 33.0 40.0 23.0 41.0 49 33.99171784112806 37.0 33.0 40.0 23.0 41.0 50 33.8716706585748 36.0 33.0 40.0 23.0 41.0 51 33.67485458048947 36.0 33.0 40.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 4.0 13 2.0 14 8.0 15 21.0 16 67.0 17 175.0 18 385.0 19 690.0 20 1138.0 21 1992.0 22 2913.0 23 4404.0 24 6228.0 25 8152.0 26 9837.0 27 10251.0 28 11175.0 29 13065.0 30 16344.0 31 20401.0 32 27233.0 33 40291.0 34 51722.0 35 55995.0 36 65483.0 37 99614.0 38 89430.0 39 18269.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.6346413585694 24.15872787192278 28.946136253128994 15.260494516378827 2 32.78539141709737 24.114786868122962 30.04988384447766 13.049937870302003 3 30.425903581912156 24.146482018404797 32.77170487493022 12.65590952475283 4 27.0197554431018 28.985755190981287 29.102090799402113 14.892398566514794 5 20.81687046408183 37.05991463919754 28.84060580957698 13.282609087143655 6 19.780655153163213 41.77564876010733 28.92866790325776 9.5150281834717 7 38.773073529146934 56.28878603972699 4.208971888562733 0.7291685425633453 8 88.35635433737326 3.184282086837508 6.899638026976895 1.5597255488123323 9 84.02024167552091 5.212051360550343 8.155918529056889 2.6117884348718685 10 48.54994687460606 26.908282158871945 13.933800356570442 10.607970609951558 11 41.877757568117566 21.548560211781233 22.83041293738407 13.743269282717138 12 37.76657242161753 21.981847323020403 25.504150984170433 14.747429271191628 13 21.767184714293432 37.58468547965927 25.91024509715644 14.73788470889085 14 16.423670514505933 39.29928505825785 28.955140557186336 15.321903870049884 15 15.544130094185022 23.820706297610258 44.533667092870395 16.10149651533433 16 16.80131102667075 20.179905995065642 43.09748059572476 19.92130238253885 17 17.321759801184967 19.744818023015 30.39348808730573 32.5399340884943 18 21.512542995551872 23.276846332546956 34.37014893118911 20.840461740712062 19 28.80116695780583 24.526643735705665 26.140935367105477 20.531253939383028 20 29.9634425255272 24.078049307569017 25.9350969763547 20.02341119054908 21 22.621152911091503 28.110356750526748 28.88400655513335 20.384483783248392 22 22.27970970123719 23.922094761295902 26.693259377982674 27.104936159484232 23 19.78965945722055 29.711502098002846 26.76079165841272 23.73804678636388 24 19.76948981613211 24.1353166813737 37.9061391345063 18.189054367987897 25 18.490158295665328 25.43877973671415 35.00171081777089 21.069351149849627 26 16.906661384141618 33.384717895153884 28.21606728015992 21.49255344054458 27 18.738136829404457 31.67029840263646 29.444254353581012 20.147310414378072 28 16.400439410037997 27.91532352464478 37.774496209187994 17.90974085612923 29 16.59655315240685 25.436078445496946 36.83714815681896 21.130220245277243 30 19.717084766518393 29.80550703236147 31.24043292693908 19.23697527418106 31 28.822777287543445 26.12130598426048 25.63561382340759 19.42030290478849 32 28.364458211024868 26.948261268886526 26.650218804588594 18.03706171550001 33 26.902879576437538 26.917646635091575 25.343694285868644 20.835779502602243 34 19.40607610437789 28.13466837148157 28.120801743233265 24.338453780907273 35 20.31226926470853 25.50613193106305 31.067910461200455 23.113688343027967 36 28.963964775162527 26.321021448252264 25.51945830106791 19.1955554755173 37 20.230150011705593 32.41297340128582 27.711105908624322 19.645770678384267 38 20.75005852797637 32.91793477282141 24.503232545156585 21.828774154045632 39 21.347043886977975 30.805705127050732 25.797331124277406 22.04991986169389 40 23.798375623548058 25.866304093356625 26.639593725800932 23.695726557294385 41 17.999063552378036 25.589331700552865 27.308973689423542 29.102631057645556 42 21.92890201516325 26.434115507212447 24.658106574942824 26.97887590268148 43 22.038934610743937 25.724396261412956 26.11662374615066 26.120045381692446 44 20.237893713194907 29.214824686200004 28.909938950818493 21.637342649786596 45 18.479713302958814 35.19476309676025 24.370329017270258 21.95519458301068 46 21.806263393902288 31.785553494570408 26.33362747393254 20.07455563759477 47 21.569810369356553 27.59368978371662 27.212267463847716 23.62423238307911 48 22.488069297124024 25.653802517603413 30.22996992562445 21.62815825964811 49 20.86621405031605 25.279223468818095 31.48066775918889 22.37389472167696 50 19.818653316285186 32.42197770534315 26.725854958670244 21.033514019701418 51 19.67584505393578 32.10484611644366 25.533865187559652 22.685443642060903 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 414.0 1 577.0 2 740.0 3 2883.0 4 5026.0 5 3919.0 6 2812.0 7 2942.0 8 3072.0 9 3112.0 10 3152.0 11 3214.0 12 3276.0 13 3156.5 14 3037.0 15 2966.5 16 2896.0 17 2782.5 18 2669.0 19 2636.5 20 2604.0 21 2668.5 22 2733.0 23 2922.0 24 3111.0 25 3430.0 26 4528.0 27 5307.0 28 6511.0 29 7715.0 30 8845.5 31 9976.0 32 11268.5 33 12561.0 34 14094.5 35 15628.0 36 17446.5 37 19265.0 38 25231.5 39 31198.0 40 37891.0 41 44584.0 42 48478.0 43 52372.0 44 51808.5 45 51245.0 46 48906.0 47 46567.0 48 43906.5 49 41246.0 50 39241.5 51 37237.0 52 33831.5 53 30426.0 54 27802.5 55 25179.0 56 23152.0 57 21125.0 58 19168.5 59 17212.0 60 15505.5 61 13799.0 62 12043.0 63 10287.0 64 8629.5 65 6972.0 66 6010.5 67 5049.0 68 4403.5 69 3758.0 70 3330.5 71 2903.0 72 2431.5 73 1960.0 74 1560.0 75 916.5 76 673.0 77 496.0 78 319.0 79 234.5 80 150.0 81 104.5 82 59.0 83 49.0 84 39.0 85 29.0 86 19.0 87 13.0 88 7.0 89 3.5 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 555290.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.67059135876785 #Duplication Level Percentage of deduplicated Percentage of total 1 69.5878579618631 22.03888613042146 2 7.99298525032864 5.062851391996342 3 4.205467909740356 3.995689669253952 4 2.762770939436744 3.4999435776312113 5 2.108836473757965 3.339404910142673 6 1.6575839066958111 3.149799753109981 7 1.3280372114822727 2.9441806683864837 8 1.148511363235625 2.9099227244749493 9 1.0095937333632838 2.8776987510949255 >10 8.065531826292647 46.41060651645576 >50 0.1129566723799483 2.335739604331895 >100 0.018163887015870586 0.8406001993269993 >500 5.676214692459558E-4 0.14039964834781574 >1k 0.0011352429384919116 0.45427645502551905 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1368 0.2463577590088062 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1159 0.20871976804912748 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 781 0.14064722937564156 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.009184390138486197 0.0 2 0.0 0.0 0.0 0.03151506420068793 0.0 3 0.0 0.0 0.0 0.04069945433917412 0.0 4 0.0 0.0 0.0 0.06230978407678871 0.0 5 0.0 0.0 0.0 0.10138846368564174 0.0 6 0.0 0.0 0.0 0.15811557924688 0.0 7 0.0 0.0 0.0 0.19809468926146698 0.0 8 0.0 0.0 0.0 0.47542725422752075 0.0 9 0.0 0.0 0.0 0.6225575825244467 0.0 10 0.0 0.0 0.0 0.8527075942300419 0.0 11 0.0 0.0 0.0 1.0203677357777017 0.0 12 0.0 0.0 0.0 1.1822651227286642 0.0 13 0.0 0.0 0.0 1.2494372309964163 0.0 14 0.0 0.0 0.0 1.2703272164094437 0.0 15 0.0 0.0 0.0 1.303282969259306 0.0 16 0.0 0.0 0.0 1.3783788650975166 0.0 17 0.0 0.0 0.0 1.4790469844585712 0.0 18 0.0 0.0 0.0 1.633020583839075 0.0 19 0.0 0.0 0.0 1.6983918312953592 0.0 20 0.0 0.0 0.0 1.775108501863891 0.0 21 0.0 0.0 0.0 1.855787066217652 0.0 22 0.0 0.0 0.0 1.9406076104377892 0.0 23 0.0 0.0 0.0 2.044517279259486 0.0 24 0.0 0.0 0.0 2.121954294152605 0.0 25 0.0 0.0 0.0 2.190567091069531 0.0 26 0.0 0.0 0.0 2.2535972194709073 0.0 27 0.0 0.0 0.0 2.3261719101730627 0.0 28 0.0 0.0 0.0 2.398026256550631 0.0 29 0.0 0.0 0.0 2.4774442183363647 0.0 30 0.0 0.0 0.0 2.5770318212105385 0.0 31 0.0 0.0 0.0 2.666534603540492 0.0 32 0.0 0.0 0.0 2.742530929784437 0.0 33 0.0 0.0 0.0 2.822309063732464 0.0 34 0.0 0.0 0.0 2.9078499522771883 0.0 35 0.0 0.0 0.0 3.0232851302922796 0.0 36 0.0 0.0 0.0 3.1217922166795726 0.0 37 0.0 0.0 0.0 3.2192187865799853 0.0 38 0.0 0.0 0.0 3.3107025158025536 0.0 39 0.0 0.0 0.0 3.4102901186767274 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGA 30 2.163466E-6 45.000004 15 GCGTTAA 30 2.163466E-6 45.000004 1 CGTAGGA 45 3.8380676E-10 45.000004 4 CCCGCTA 30 2.163466E-6 45.000004 24 CGACGGT 80 0.0 45.0 28 CTATCGG 25 3.888192E-5 45.0 19 GCTATCG 25 3.888192E-5 45.0 18 CTACGAT 20 7.030135E-4 45.0 14 TCGTATC 20 7.030135E-4 45.0 10 TCACTAC 20 7.030135E-4 45.0 45 GTAAGGC 95 0.0 45.0 4 CGCCGAC 20 7.030135E-4 45.0 13 AGAATCG 25 3.888192E-5 45.0 13 TGCGTAA 20 7.030135E-4 45.0 1 TACCGCC 20 7.030135E-4 45.0 34 CGTTTTA 970 0.0 43.37629 1 TAACGGG 100 0.0 42.75 3 CGGTCTA 85 0.0 42.35294 31 CGTTTTT 1305 0.0 41.03448 1 AGGCGAT 390 0.0 40.961536 7 >>END_MODULE