##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545691_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 361632 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.933459981417574 31.0 31.0 33.0 30.0 33.0 2 31.105709671710468 31.0 31.0 33.0 30.0 34.0 3 31.016530616759578 31.0 31.0 34.0 28.0 34.0 4 35.011948610742415 35.0 35.0 37.0 32.0 37.0 5 32.73493219626582 35.0 35.0 37.0 28.0 37.0 6 33.92207548004601 35.0 35.0 37.0 28.0 37.0 7 15.648615166799399 0.0 0.0 35.0 0.0 37.0 8 25.068442505088047 17.0 17.0 35.0 17.0 37.0 9 32.68442228563844 32.0 32.0 37.0 27.0 39.0 10 35.41533658525794 37.0 34.0 37.0 32.0 39.0 11 36.37857269268206 37.0 35.0 39.0 32.0 39.0 12 36.2949158260331 37.0 35.0 39.0 32.0 39.0 13 36.06816598088665 37.0 35.0 39.0 31.0 39.0 14 37.110839195646406 39.0 36.0 40.0 32.0 41.0 15 37.41874612866118 39.0 36.0 41.0 32.0 41.0 16 37.4264639191222 39.0 36.0 41.0 32.0 41.0 17 37.39246250331829 39.0 35.0 41.0 32.0 41.0 18 37.29799907087868 39.0 36.0 40.0 32.0 41.0 19 37.24419299177064 39.0 36.0 40.0 32.0 41.0 20 37.336499535439344 39.0 35.0 40.0 32.0 41.0 21 37.17399455800371 39.0 35.0 40.0 32.0 41.0 22 37.22819883196178 39.0 35.0 40.0 32.0 41.0 23 37.19320192903283 39.0 35.0 40.0 32.0 41.0 24 37.000478386868416 39.0 35.0 40.0 32.0 41.0 25 36.74723475798602 38.0 35.0 40.0 31.0 41.0 26 36.61230477391381 38.0 35.0 40.0 31.0 41.0 27 36.52915118131139 38.0 35.0 40.0 31.0 41.0 28 36.43214372621892 38.0 35.0 40.0 31.0 41.0 29 36.42370420759225 38.0 35.0 40.0 30.0 41.0 30 36.13854415538448 38.0 35.0 40.0 30.0 41.0 31 36.005041036191486 38.0 35.0 40.0 30.0 41.0 32 35.87273250154853 38.0 34.0 40.0 29.0 41.0 33 35.67009280152199 38.0 34.0 40.0 28.0 41.0 34 35.47323522254668 38.0 34.0 40.0 27.0 41.0 35 35.271043491726395 38.0 34.0 40.0 26.0 41.0 36 35.060608574462435 38.0 34.0 40.0 25.0 41.0 37 34.92440381382178 38.0 34.0 40.0 24.0 41.0 38 34.79988773117423 38.0 34.0 40.0 24.0 41.0 39 34.68895451729935 38.0 33.0 40.0 23.0 41.0 40 34.5365703256349 38.0 33.0 40.0 23.0 41.0 41 34.37326619325724 38.0 33.0 40.0 23.0 41.0 42 34.319628793912045 37.0 33.0 40.0 23.0 41.0 43 34.2453516281745 37.0 33.0 40.0 23.0 41.0 44 34.04044996018052 37.0 33.0 40.0 22.0 41.0 45 33.956759910627376 37.0 33.0 40.0 22.0 41.0 46 33.92453101495443 37.0 33.0 40.0 22.0 41.0 47 33.829390098221396 37.0 33.0 40.0 22.0 41.0 48 33.76937605079196 36.0 33.0 40.0 22.0 41.0 49 33.65923922661711 36.0 33.0 40.0 21.0 41.0 50 33.53398758959384 36.0 32.0 40.0 20.0 41.0 51 33.33612899300947 36.0 32.0 40.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 0.0 13 4.0 14 7.0 15 23.0 16 40.0 17 138.0 18 267.0 19 531.0 20 872.0 21 1455.0 22 2137.0 23 3058.0 24 4388.0 25 5718.0 26 7033.0 27 7173.0 28 7992.0 29 8798.0 30 10647.0 31 13668.0 32 17771.0 33 25359.0 34 32386.0 35 36167.0 36 43605.0 37 64869.0 38 55543.0 39 11981.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 35.332050261038844 22.93823555437572 26.58863153703212 15.141082647553313 2 35.769235023449255 22.372190514113797 29.27257543580214 12.585999026634811 3 30.651878152375893 23.507322360853024 32.75871604282807 13.082083443943013 4 27.435901690115923 26.54466418900982 30.347978055039377 15.671456065834882 5 21.018881072471462 35.977734271303426 28.852811698079815 14.150572958145297 6 19.480576940093798 40.97839792938678 29.67878948765596 9.862235642863464 7 38.13213432439607 55.863419166445446 5.13726661357402 0.8671798955844615 8 85.58534642951952 3.6385054419962835 8.79374612866118 1.9824019998230247 9 80.99089682328997 5.112932483850987 10.515109282364392 3.3810614104946466 10 45.43900982213963 25.114204495177418 16.82815680028316 12.618628882399788 11 39.78823776656933 23.112722325457923 22.543082470577826 14.55595743739492 12 35.14401380408813 22.386293248385098 27.420692859039026 15.049000088487743 13 23.05492876736572 33.940580479603575 27.666799398283338 15.337691354747369 14 18.254468631094596 36.79984072206 29.409454915494205 15.536235731351208 15 16.44848907176356 23.830302628086013 43.30009512432528 16.42111317582515 16 18.62584063357225 19.873794354481905 42.15003097071055 19.35033404123529 17 19.553579329262895 19.712027696664013 30.18842359083267 30.545969383240422 18 22.236417131227327 22.47063312981152 34.6241483054597 20.66880143350146 19 28.728375807450668 24.26002123705867 27.015584903990796 19.996018051499867 20 29.949783205026105 23.78080479603575 26.069319086806473 20.20009291213167 21 24.337448013450135 27.005630032740463 29.27285196000354 19.38406999380586 22 23.554054950889302 23.607147597557738 27.539045217237412 25.299752234315548 23 20.76945624281037 29.256260507919652 26.900827360410585 23.073455888859392 24 20.836098575347314 25.023228032917437 36.206143261658255 17.934530130076983 25 20.870664100522077 23.933722679408902 34.16705380054862 21.028559419520395 26 18.70769179718609 31.02712149367313 28.529554906645433 21.73563180249535 27 19.42029466418901 30.02002035218122 30.295991505176534 20.263693478453234 28 18.065602601539688 26.776114945580037 36.444230599062024 18.714051853818244 29 18.635518980621185 24.911788779754005 36.36818644367755 20.084505795947262 30 20.926798513405892 27.689750906999382 31.78728652331652 19.596164056278205 31 28.41894522608619 24.679508450579597 27.070336695867624 19.831209627466595 32 28.34981417573666 25.86911556499425 27.447792230776034 18.33327802849305 33 27.041301654720822 24.965710999026637 27.439496504734095 20.55349084151845 34 20.80319219538094 26.87455756127776 28.44991593664277 23.872334306698523 35 21.236505618971773 25.028758516945405 31.415361472436064 22.319374391646758 36 28.794465091584815 25.17255110167242 26.481340146889654 19.55164365985311 37 21.364812848420495 30.757233873108575 27.518305902132557 20.359647376338376 38 22.06967303778427 32.088974427041855 24.53405672064419 21.307295814529688 39 21.830203079373504 29.065458808954958 25.99078621360941 23.113551898062116 40 24.40602601539687 25.17669896469339 26.668547031236173 23.74872798867357 41 20.06127776302982 24.17512830722945 28.108685072117513 27.654908857623216 42 22.862744447394036 26.484381913105036 25.2635275639324 25.389346075568536 43 22.514047429431024 26.788005486240156 25.745232722767895 24.952714361560922 44 21.14193434209362 28.374148305459695 28.621913989912397 21.86200336253429 45 19.90172329882311 32.58561189275285 25.480875586231306 22.031789222192728 46 22.322139633660736 29.804331475090702 27.445580037164852 20.42794885408371 47 21.995841076010972 27.645783558977083 26.79768383328909 23.560691531722856 48 22.55524953543934 25.92552650207946 29.934574373949207 21.58464958853199 49 21.41928811609592 25.241405627820544 31.203820458366515 22.135485797717017 50 20.70087824086364 30.43535970268118 27.286302097159542 21.577459959295638 51 20.318998318732856 31.65649057605522 26.043602336076454 21.980908769135475 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 207.0 1 358.5 2 510.0 3 2566.5 4 4623.0 5 3438.5 6 2254.0 7 2222.5 8 2191.0 9 2253.0 10 2315.0 11 2293.5 12 2272.0 13 2142.5 14 2013.0 15 1973.0 16 1933.0 17 1841.5 18 1750.0 19 1764.0 20 1778.0 21 1802.5 22 1827.0 23 1990.5 24 2154.0 25 2286.0 26 2854.5 27 3291.0 28 3880.5 29 4470.0 30 5167.0 31 5864.0 32 6891.5 33 7919.0 34 8729.0 35 9539.0 36 10798.5 37 12058.0 38 15061.5 39 18065.0 40 21883.5 41 25702.0 42 27677.0 43 29652.0 44 29456.5 45 29261.0 46 29208.0 47 29155.0 48 28295.5 49 27436.0 50 26184.5 51 24933.0 52 22829.5 53 20726.0 54 19242.5 55 17759.0 56 16764.5 57 15770.0 58 14527.5 59 13285.0 60 11990.0 61 10695.0 62 9461.5 63 8228.0 64 7216.5 65 6205.0 66 5289.0 67 4373.0 68 3787.5 69 3202.0 70 2733.5 71 2265.0 72 1913.5 73 1562.0 74 1241.0 75 721.0 76 522.0 77 390.0 78 258.0 79 196.5 80 135.0 81 102.5 82 70.0 83 56.0 84 42.0 85 26.5 86 11.0 87 10.0 88 9.0 89 5.5 90 2.0 91 2.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 361632.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.049173835876374 #Duplication Level Percentage of deduplicated Percentage of total 1 68.47680693833102 30.163467725522885 2 10.432460808604382 9.190825593883636 3 5.7548729629963455 7.60492198651233 4 3.6287942628592043 6.393815571972638 5 2.6836975686129567 5.910733036137546 6 1.9557154770890466 5.1688590614285586 7 1.47558167634068 4.549870763911514 8 1.1871365426366265 4.183390714681763 9 0.9169830547375422 3.635311138441824 >10 3.461215050142475 21.467061709477107 >50 0.018031024926565706 0.5617277042005243 >100 0.0068393542824904405 0.3848012795717878 >500 6.217594802264036E-4 0.14186979560013244 >1k 0.0012435189604528072 0.6433439186577434 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1211 0.3348708078931068 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1138 0.31468454119104505 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 518 0.1432395363242191 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0074661534377488716 0.0 2 0.0 0.0 0.0 0.03567162198035572 0.0 3 0.0 0.0 0.0 0.04452039642509512 0.0 4 0.0 0.0 0.0 0.06415361472436068 0.0 5 0.0 0.0 0.0 0.10950358375365012 0.0 6 0.0 0.0 0.0 0.17586939208919564 0.0 7 0.0 0.0 0.0 0.22011326431289266 0.0 8 0.0 0.0 0.0 0.5076984337669233 0.0 9 0.0 0.0 0.0 0.6476196796743651 0.0 10 0.0 0.0 0.0 0.8743695248208123 0.0 11 0.0 0.0 0.0 1.0264578355897709 0.0 12 0.0 0.0 0.0 1.1708034687195823 0.0 13 0.0 0.0 0.0 1.2316387930271657 0.0 14 0.0 0.0 0.0 1.2620564551809574 0.0 15 0.0 0.0 0.0 1.299940270772498 0.0 16 0.0 0.0 0.0 1.3770905229625696 0.0 17 0.0 0.0 0.0 1.466684364215556 0.0 18 0.0 0.0 0.0 1.6154543845677374 0.0 19 0.0 0.0 0.0 1.6704827006459606 0.0 20 0.0 0.0 0.0 1.729105831342359 0.0 21 0.0 0.0 0.0 1.8109569949561986 0.0 22 0.0 0.0 0.0 1.8881072471462703 0.0 23 0.0 0.0 0.0 1.9865498628439962 0.0 24 0.0 0.0 0.0 2.0601053004158922 0.0 25 0.0 0.0 0.0 2.126471108751438 0.0 26 0.0 0.0 0.0 2.1884125298646135 0.0 27 0.0 0.0 0.0 2.2498009025749934 0.0 28 0.0 0.0 0.0 2.321697194938501 0.0 29 0.0 0.0 0.0 2.4013361649411555 0.0 30 0.0 0.0 0.0 2.50143792584727 0.0 31 0.0 0.0 0.0 2.59490310591983 0.0 32 0.0 0.0 0.0 2.680349084151845 0.0 33 0.0 0.0 0.0 2.769666401203433 0.0 34 0.0 0.0 0.0 2.8578776214494295 0.0 35 0.0 0.0 0.0 2.963786390584904 0.0 36 0.0 0.0 0.0 3.0536567560392887 0.0 37 0.0 0.0 0.0 3.1316365808335545 0.0 38 0.0 0.0 0.0 3.2198478010795504 0.0 39 0.0 0.0 0.0 3.3417949738961155 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 30 2.1613596E-6 45.000004 5 CTCACGA 60 0.0 45.000004 24 CGGTCTA 60 0.0 45.000004 31 TTCATCG 30 2.1613596E-6 45.000004 15 TCGCCGT 20 7.026867E-4 45.0 25 TATCACC 20 7.026867E-4 45.0 44 CAACCCG 25 3.8854858E-5 45.0 23 CGAATAT 20 7.026867E-4 45.0 14 CGTTTTA 775 0.0 44.129032 1 AGGCGAT 275 0.0 43.363636 7 CGTTTTT 960 0.0 42.656254 1 TAAGGCG 75 0.0 42.0 5 AAGGCGA 200 0.0 41.625 6 CGACGGT 65 0.0 41.53846 28 TACGGGC 55 6.002665E-11 40.909092 4 CGTTATT 200 0.0 40.5 1 GTTTTAT 895 0.0 40.47486 2 GCGCGAC 190 0.0 40.263157 9 AGGTACC 90 0.0 40.0 7 GGTACCT 175 0.0 39.857143 8 >>END_MODULE