##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545690_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1194783 Sequences flagged as poor quality 0 Sequence length 50 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.505164536154265 31.0 31.0 33.0 30.0 34.0 2 31.695958178179637 31.0 31.0 34.0 30.0 34.0 3 31.715257917128046 31.0 31.0 34.0 30.0 34.0 4 35.638221333915865 37.0 35.0 37.0 33.0 37.0 5 27.23153995328022 35.0 26.0 37.0 0.0 37.0 6 31.3945938300093 35.0 28.0 37.0 17.0 37.0 7 14.901777979767036 0.0 0.0 32.0 0.0 37.0 8 25.039876697274735 17.0 17.0 35.0 17.0 37.0 9 33.14231370884922 32.0 32.0 37.0 28.0 39.0 10 35.99884916340457 37.0 35.0 39.0 32.0 39.0 11 36.98782707822257 39.0 37.0 39.0 34.0 39.0 12 37.00494985281846 39.0 35.0 39.0 33.0 39.0 13 36.5562273651366 39.0 35.0 39.0 33.0 39.0 14 37.86919298316096 40.0 36.0 41.0 33.0 41.0 15 38.130324083954996 40.0 37.0 41.0 33.0 41.0 16 38.19375233829072 40.0 36.0 41.0 33.0 41.0 17 38.22508103982062 40.0 36.0 41.0 34.0 41.0 18 38.18699797369062 40.0 36.0 41.0 34.0 41.0 19 38.11364406758382 40.0 36.0 41.0 34.0 41.0 20 38.1289313624315 40.0 36.0 41.0 34.0 41.0 21 37.990710447001675 40.0 36.0 41.0 34.0 41.0 22 37.88398562751562 40.0 35.0 41.0 33.0 41.0 23 37.76950040300205 40.0 35.0 41.0 33.0 41.0 24 37.60065049469234 39.0 35.0 41.0 33.0 41.0 25 37.41824247583034 39.0 35.0 41.0 33.0 41.0 26 37.179404126104906 39.0 35.0 40.0 33.0 41.0 27 36.95802919860761 39.0 35.0 40.0 32.0 41.0 28 36.961121810404066 39.0 35.0 40.0 32.0 41.0 29 36.881357535217695 39.0 35.0 40.0 32.0 41.0 30 36.657979733558314 38.0 35.0 40.0 31.0 41.0 31 36.44585669531622 38.0 35.0 40.0 31.0 41.0 32 36.18282315700843 38.0 35.0 40.0 30.0 41.0 33 35.929949622651144 38.0 35.0 40.0 30.0 41.0 34 35.65057336771615 38.0 35.0 40.0 29.0 41.0 35 35.419425954336475 38.0 35.0 40.0 27.0 41.0 36 35.21048508390226 38.0 34.0 40.0 26.0 41.0 37 35.057979566163894 38.0 34.0 40.0 26.0 41.0 38 34.86754331121216 38.0 34.0 40.0 25.0 41.0 39 34.78480025243078 38.0 34.0 40.0 24.0 41.0 40 34.52692664693087 37.0 34.0 40.0 24.0 41.0 41 34.33695574844972 37.0 34.0 40.0 23.0 40.0 42 34.31973421114964 37.0 33.0 40.0 23.0 40.0 43 34.19316227298179 37.0 33.0 40.0 23.0 40.0 44 33.954605982843745 37.0 33.0 40.0 23.0 40.0 45 33.731596448894905 36.0 33.0 39.0 23.0 40.0 46 33.676302726101724 36.0 33.0 39.0 23.0 40.0 47 33.500053147726405 36.0 33.0 39.0 23.0 40.0 48 33.413340330419835 36.0 33.0 39.0 22.0 40.0 49 33.278196961289204 35.0 33.0 39.0 22.0 40.0 50 33.33695491147765 35.0 33.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 5.0 13 6.0 14 13.0 15 25.0 16 78.0 17 188.0 18 462.0 19 1053.0 20 1911.0 21 3289.0 22 5389.0 23 8101.0 24 12150.0 25 17212.0 26 21700.0 27 22978.0 28 23332.0 29 25488.0 30 30046.0 31 39657.0 32 54180.0 33 96148.0 34 100555.0 35 125017.0 36 164926.0 37 287057.0 38 123077.0 39 30738.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.98657580497881 22.468849992006916 27.26344449159387 17.2811297114204 2 36.09450419030066 23.331851892770487 28.379881534973293 12.193762381955551 3 30.652260703408068 23.105199856375595 33.45377361412073 12.788765826095617 4 26.79474013272703 26.49954008384786 31.26969499900819 15.436024784416919 5 17.373196639054957 46.972797570772265 23.997914265603043 11.656091524569733 6 19.781918557595816 39.99797452759204 29.99306150154463 10.227045413267515 7 37.89064625124395 56.13655366706758 4.893691992604515 1.079108089083959 8 84.79707193691239 3.2318002515938042 9.866896331802511 2.1042314796912915 9 80.18025030486707 4.8758644875261865 11.651488178188005 3.292397029418731 10 48.183645063580585 21.964574320190362 17.335867684759492 12.515912931469565 11 41.60889466957598 21.235404253324663 23.001666411390183 14.154034665709169 12 36.78425287269739 19.973417767075695 27.86564589553082 15.3766834646961 13 22.775935044271638 33.0942104131043 28.63214491669199 15.497709625932075 14 17.73820015852251 36.33203686359783 30.553246907597448 15.376516070282218 15 16.15866646914126 22.01763834939064 45.28546187885164 16.538233302616458 16 18.455234130381832 17.545529188145462 44.02933419708851 19.969902484384193 17 18.872966890221907 17.995987555899273 30.883683480598567 32.24736207328025 18 22.693995478676882 21.851331999199854 34.33242689258217 21.122245629541098 19 27.90983802079541 24.001345851087603 27.5391430912559 20.549673036861087 20 29.356460545555134 23.23292179416681 26.524649245930014 20.885968414348042 21 23.983518346009276 25.440268232808805 30.18857817695766 20.387635244224263 22 23.328252912872045 22.441899491372073 28.25316396366537 25.976683632090513 23 21.194560016337693 27.66443781004584 26.661326784863864 24.479675388752604 24 21.171794376049878 23.807921605848094 36.01867452081257 19.001609497289465 25 20.590182485020293 23.252004757349244 34.20060379165087 21.957208965979596 26 19.13117277363337 29.206224059096925 29.32507409295245 22.33752907431726 27 19.842766427041564 28.008098541743564 30.952817373531428 21.196317657683444 28 18.48134765894727 25.56681840970285 37.32786623177598 18.6239676995739 29 19.032577463857454 23.724224398907584 35.869944584079285 21.373253553155678 30 21.305626209947746 25.893321213977767 33.07236544209283 19.72868713398165 31 29.072308527992114 23.788922339872595 26.723681204034538 20.41508792810075 32 28.68428827661592 24.842837569667463 27.47461254470477 18.998261609011845 33 27.11471455486059 24.73955521630288 27.412760308775734 20.7329699200608 34 21.725535097168272 26.070842989898583 29.208316489270437 22.995305423662707 35 22.318780899962587 24.52729909950175 30.81588874297676 22.338031257558903 36 29.913716549365034 23.55013420847133 26.237567826124074 20.298581416039564 37 22.252660106479585 28.971620788042685 27.952356201921187 20.823362903556543 38 23.450534532212124 29.548880424311356 24.74181504089027 22.258770002586246 39 22.456881291414422 27.633553540684797 26.54883773873582 23.360727429164964 40 24.21008668519723 24.510308566492828 27.279179566498684 24.00042518181126 41 20.30594677025033 23.567878016342718 28.470023426848222 27.65615178655873 42 23.913798572627833 25.872648003863464 24.77813962870245 25.435413794806255 43 23.288329345161422 25.893739700012468 26.565242391296163 24.252688563529947 44 21.960222065429456 27.674648869292582 28.29769087775772 22.067438187520246 45 20.33197660160883 31.24023358216513 25.82117422159505 22.60661559463099 46 23.898984166999362 27.707792963241022 27.69415031850972 20.69907255124989 47 23.32749963800958 26.546243125320668 27.633804632305615 22.49245260436414 48 23.749417258196676 24.63568698248971 28.741369771749348 22.87352598756427 49 22.075640513800415 24.059599107118196 30.643137707851555 23.221622671229838 50 21.191044733646194 28.736933819781502 28.11949952418138 21.95252192239093 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1331.0 1 1769.5 2 2208.0 3 10217.5 4 18227.0 5 13294.5 6 8362.0 7 8550.0 8 8738.0 9 8944.5 10 9151.0 11 9102.5 12 9054.0 13 8727.0 14 8400.0 15 7945.0 16 7490.0 17 6988.5 18 6487.0 19 6323.5 20 6160.0 21 6125.5 22 6091.0 23 6468.0 24 6845.0 25 7342.5 26 7840.0 27 9042.5 28 10245.0 29 11933.5 30 13622.0 31 15787.0 32 17952.0 33 19863.0 34 21774.0 35 23790.0 36 25806.0 37 32111.0 38 38416.0 39 50252.5 40 62089.0 41 73800.0 42 85511.0 43 91397.0 44 97283.0 45 98324.0 46 99365.0 47 99316.5 48 99268.0 49 94602.0 50 89936.0 51 81858.0 52 73780.0 53 68063.5 54 62347.0 55 60200.0 56 58053.0 57 56022.0 58 53991.0 59 50269.5 60 46548.0 61 42599.0 62 38650.0 63 33902.5 64 29155.0 65 25263.5 66 21372.0 67 18434.5 68 15497.0 69 13236.0 70 10975.0 71 9088.5 72 7202.0 73 5710.0 74 4218.0 75 3373.5 76 2529.0 77 1962.0 78 1395.0 79 1108.0 80 821.0 81 586.5 82 352.0 83 247.5 84 143.0 85 106.5 86 70.0 87 42.0 88 14.0 89 9.5 90 5.0 91 6.0 92 7.0 93 4.5 94 2.0 95 3.0 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1194783.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.591634088483225 #Duplication Level Percentage of deduplicated Percentage of total 1 71.43972504391866 20.425784778375736 2 7.343690066272577 4.199361984681893 3 3.614469346729067 3.1003075495714945 4 2.3959642360559954 2.74018130905621 5 1.8076809259450575 2.584227579167581 6 1.3801656115267853 2.367671408776892 7 1.209853762989712 2.4214187264383447 8 1.0027257148915403 2.293565338503334 9 0.8655598938161633 2.227299458909232 >10 8.62126189704203 49.439390272819075 >50 0.27694262325592717 5.045213608298246 >100 0.04028244245427201 1.8710030186722162 >500 0.0 0.0 >1k 0.0013427480817689548 0.7263645657659074 >5k 3.356870204422387E-4 0.5582104009638633 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5816 0.4867829555659898 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2475 0.20715058717775528 No Hit CGTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2451 0.20514185421118314 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1601 0.133999228311752 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.004017465933144345 0.0 2 0.0 0.0 0.0 0.026113528565438242 0.0 3 0.0 0.0 0.0 0.04385733643682577 0.0 4 0.0 0.0 0.0 0.06386096889560698 0.0 5 0.0 0.0 0.0 0.10763460812549225 0.0 6 0.0 0.0 0.0 0.23108798836274036 0.0 7 0.0 0.0 0.0 0.3175472031322843 0.0 8 0.0 0.0 0.0 0.8071758637342513 0.0 9 0.0 0.0 0.0 1.0840462242934492 0.0 10 0.0 0.0 0.0 1.4836166902274304 0.0 11 0.0 0.0 0.0 1.740650812741728 0.0 12 0.0 0.0 0.0 1.9755888726237316 0.0 13 0.0 0.0 0.0 2.083056086335343 0.0 14 0.0 0.0 0.0 2.1259090562888825 0.0 15 0.0 0.0 0.0 2.171189245243697 0.0 16 0.0 0.0 0.0 2.272965048883354 0.0 17 0.0 0.0 0.0 2.380599657008846 0.0 18 0.0 0.0 0.0 2.5496680150286704 0.0 19 0.0 0.0 0.0 2.622484585066912 0.0 20 0.0 0.0 0.0 2.70308499535062 0.0 21 0.0 0.0 0.0 2.801261819091835 0.0 22 0.0 0.0 0.0 2.89943864283305 0.0 23 0.0 0.0 0.0 3.0105885336500435 0.0 24 0.0 0.0 0.0 3.100563031111089 0.0 25 0.0 0.0 0.0 3.1671860078357326 0.0 26 0.0 0.0 0.0 3.2388308169768067 0.0 27 0.0 0.0 0.0 3.3158322473620734 0.0 28 0.0 0.0 0.0 3.3981902989915325 0.0 29 0.0 0.0 0.0 3.489169162935864 0.0 30 0.0 0.0 0.0 3.6135432124494575 0.0 31 0.0 0.0 0.0 3.714482044019709 0.0 32 0.0 0.0 0.0 3.8068000632750882 0.0 33 0.0 0.0 0.0 3.894682130562621 0.0 34 0.0 0.0 0.0 3.9892599744053943 0.0 35 0.0 0.0 0.0 4.111457896538535 0.0 36 0.0 0.0 0.0 4.2144054610753585 0.0 37 0.0 0.0 0.0 4.316934539577479 0.0 38 0.0 0.0 0.0 4.4352823901913565 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 60 0.0 44.0 2 CCCGTTA 20 7.8566076E-4 44.0 31 CGTTTTA 3380 0.0 42.763313 1 CGTTATT 1910 0.0 42.502613 1 TTGCGAA 115 0.0 42.08696 1 AGGCGAT 885 0.0 41.016953 7 GTTATTT 2170 0.0 40.65438 2 TCGTAGA 60 3.6379788E-12 40.333332 1 GTTTTAT 3910 0.0 39.94885 2 CGTTTTT 1880 0.0 39.319145 1 GTACGGG 275 0.0 39.2 3 GCGATAT 85 0.0 38.82353 9 TTACGAA 40 4.1247222E-7 38.5 1 TTACGGG 350 0.0 38.342857 3 GGTACCT 985 0.0 38.19289 8 GTTGATC 945 0.0 38.179893 16 GTAGCAT 940 0.0 37.91489 29 ACGTTAG 35 7.2904495E-6 37.714287 2 GCGATCG 35 7.2904495E-6 37.714287 9 TACGGGG 630 0.0 37.714283 4 >>END_MODULE