##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545689_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 449881 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality fail #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.004396718243267 31.0 31.0 33.0 30.0 33.0 2 31.17457060867207 31.0 31.0 33.0 30.0 34.0 3 31.07714039935005 31.0 31.0 34.0 28.0 34.0 4 35.05212044963001 35.0 35.0 37.0 32.0 37.0 5 32.773095551934844 35.0 35.0 37.0 28.0 37.0 6 33.978083093084614 35.0 35.0 37.0 28.0 37.0 7 15.209886614460268 0.0 0.0 35.0 0.0 37.0 8 24.858384772862156 17.0 17.0 35.0 17.0 37.0 9 32.664071165485986 32.0 32.0 37.0 27.0 39.0 10 35.48484154698687 37.0 34.0 37.0 32.0 39.0 11 36.45825451619428 37.0 35.0 39.0 32.0 39.0 12 36.34225495186505 37.0 35.0 39.0 32.0 39.0 13 36.05621042008887 37.0 35.0 39.0 31.0 39.0 14 37.10158908689187 39.0 36.0 40.0 32.0 41.0 15 37.42065790731327 39.0 36.0 41.0 32.0 41.0 16 37.452959782698095 39.0 36.0 41.0 32.0 41.0 17 37.40939715169122 39.0 35.0 41.0 32.0 41.0 18 37.32045585388136 39.0 36.0 40.0 32.0 41.0 19 37.23737388331581 39.0 36.0 40.0 32.0 41.0 20 37.343995412120094 39.0 35.0 40.0 32.0 41.0 21 37.19476261500263 39.0 35.0 40.0 32.0 41.0 22 37.227431254042735 39.0 35.0 40.0 32.0 41.0 23 37.195502810743285 39.0 35.0 40.0 32.0 41.0 24 36.99865964555071 39.0 35.0 40.0 32.0 41.0 25 36.73684596593321 38.0 35.0 40.0 31.0 41.0 26 36.62572991524426 38.0 35.0 40.0 31.0 41.0 27 36.51667218664491 38.0 35.0 40.0 31.0 41.0 28 36.40285986738715 38.0 35.0 40.0 31.0 41.0 29 36.37127595964266 38.0 35.0 40.0 31.0 41.0 30 36.066175277462264 38.0 35.0 40.0 30.0 41.0 31 35.9179916466799 38.0 35.0 40.0 30.0 41.0 32 35.777850142593266 38.0 34.0 40.0 29.0 41.0 33 35.53012685576852 38.0 34.0 40.0 27.0 41.0 34 35.31881986569782 38.0 34.0 40.0 26.0 41.0 35 35.075677790349005 38.0 34.0 40.0 25.0 41.0 36 34.84452110669266 38.0 34.0 40.0 24.0 41.0 37 34.67526968242713 38.0 33.0 40.0 23.0 41.0 38 34.54458178940653 38.0 33.0 40.0 23.0 41.0 39 34.42703737210507 38.0 33.0 40.0 23.0 41.0 40 34.23905655051002 37.0 33.0 40.0 23.0 41.0 41 34.091939868543015 37.0 33.0 40.0 22.0 41.0 42 34.03031690602626 37.0 33.0 40.0 22.0 41.0 43 33.93797915448752 37.0 33.0 40.0 21.0 41.0 44 33.69738664224539 37.0 33.0 40.0 20.0 41.0 45 33.600092024335325 36.0 33.0 40.0 20.0 41.0 46 33.57478533212116 36.0 33.0 40.0 20.0 41.0 47 33.47279613942354 36.0 32.0 40.0 20.0 41.0 48 33.418070556436035 36.0 32.0 40.0 20.0 41.0 49 33.306483270020294 36.0 32.0 40.0 20.0 41.0 50 33.16218066555378 35.0 32.0 40.0 20.0 40.0 51 32.9809660776961 35.0 32.0 39.0 19.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 7.0 14 7.0 15 17.0 16 62.0 17 138.0 18 322.0 19 641.0 20 1225.0 21 1798.0 22 2849.0 23 4044.0 24 5698.0 25 7670.0 26 8992.0 27 9469.0 28 10000.0 29 11346.0 30 13297.0 31 17271.0 32 22441.0 33 33381.0 34 41918.0 35 45488.0 36 54164.0 37 78834.0 38 65836.0 39 12966.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.597953681084554 23.32216741760599 27.52261153505038 16.557267366259076 2 35.66454240121277 23.22480833820499 28.94832188956635 12.162327371015891 3 31.371184824431346 22.908724751656546 32.88869723326835 12.831393190643748 4 27.168517896954974 27.148734887670294 30.039721615271592 15.643025600103138 5 21.262511641967542 35.57518543792692 28.867411604402054 14.294891315703486 6 19.72410481882987 40.815015526328075 29.427115170456187 10.033764484385872 7 36.823737832893585 57.212907413293735 5.159142084240054 0.8042126695726203 8 85.60463767085074 3.433130094402742 9.00993818365301 1.9522940510935112 9 80.877832137832 5.054670012736701 10.709721015112885 3.3577768343184085 10 48.49638015386291 22.612424174392785 16.48080270115875 12.410392970585555 11 42.00355205043111 21.727523500659064 22.221654170769604 14.04727027814022 12 37.217175208555155 20.474525485628423 27.158515251811032 15.14978405400539 13 23.051651436713264 34.05811759109631 27.45726092010998 15.432970052080439 14 17.722019823019867 37.266521591265246 29.93058164270107 15.080876943013818 15 16.14471382432243 22.457049753156948 45.025240007913204 16.372996414607417 16 18.442210273383406 17.920961320882633 43.59486175233006 20.0419666534039 17 18.749180338800706 18.44621133144098 30.16553266308202 32.6390756666763 18 22.80580864717559 22.0931757509208 34.16614615865085 20.934869443252772 19 28.648242535248208 24.05525016615505 26.837319202189025 20.459188096407715 20 29.951031494995345 23.438420382278867 25.85772682109269 20.752821301633098 21 24.15505433659123 26.021770201453275 29.556260433314584 20.26691502864091 22 23.416636843965406 22.728010296056066 27.463929350205945 26.391423509772583 23 21.137367437166716 28.188343139630256 26.08667625438727 24.587613168815754 24 21.08024121934467 24.092815655695617 35.93839259715347 18.88855052780624 25 20.525205554357708 23.54978316488138 34.082568501448165 21.84244277931275 26 19.06015146227558 29.947474998944166 28.63735076609148 22.35502277268878 27 19.725216223845862 29.102140343779798 30.261113494457426 20.911529937916914 28 18.45599169558172 26.151804588324467 36.97333294804626 18.41887076804755 29 18.9112231901325 24.39600694405854 35.53228520430958 21.160484661499375 30 21.19982839906553 26.822648655977915 32.41101535739451 19.566507587562043 31 29.62450070129656 24.254636226024214 26.0006535061494 20.120209566529816 32 29.19260871208164 25.050624498478484 27.03092595597503 18.72584083346485 33 27.689322287449347 25.021727968062667 26.68305618596918 20.605893558518808 34 21.610159130970192 26.49389505224715 28.54843836481203 23.347507451970632 35 22.428153222741127 24.640516047577027 30.71879008004339 22.21254064963846 36 30.38447945123266 24.003014130403376 25.641669685983626 19.97083673238034 37 22.203427128507318 29.818329736085765 27.442145811892477 20.53609732351444 38 23.422638431051766 30.274005792642946 24.147496782482477 22.15585899382281 39 22.392810543232542 28.075424390005356 26.312513753637074 23.219251313125028 40 24.519817462840173 24.63051340243309 26.89777963505905 23.95188949966769 41 20.18889439651819 23.83585881599801 28.095429680293233 27.87981710719057 42 23.802961227524612 25.827052042651278 24.42001329240399 25.949973437420116 43 23.15101104514305 25.70124099484086 26.344744499100877 24.80300346091522 44 21.71351979745755 27.62508307752495 28.5208755204154 22.140521604602107 45 20.11820903750103 32.14294446753697 25.509857051086843 22.228989443875157 46 23.653588393375134 28.540658529700075 27.172741236015746 20.63301184090904 47 23.009640327108723 27.15962665682703 27.052042651278896 22.778690364785355 48 23.442643721339643 25.040177291328153 28.84184928903421 22.675329698297993 49 22.151635654762035 24.492476899446743 30.71856779904019 22.63731964675103 50 21.21405438327024 29.67851498507383 27.456594077100387 21.65083655455554 51 20.88707902756507 31.314503168615698 25.259124079478795 22.539293724340435 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 564.0 1 681.5 2 799.0 3 3288.0 4 5777.0 5 4312.5 6 2848.0 7 2820.5 8 2793.0 9 2870.5 10 2948.0 11 2896.5 12 2845.0 13 2826.5 14 2808.0 15 2652.0 16 2496.0 17 2439.5 18 2383.0 19 2336.5 20 2290.0 21 2290.0 22 2290.0 23 2385.0 24 2480.0 25 2722.0 26 3357.0 27 3750.0 28 4272.0 29 4794.0 30 5535.0 31 6276.0 32 7137.0 33 7998.0 34 8740.0 35 9482.0 36 11245.0 37 13008.0 38 16674.0 39 20340.0 40 25137.0 41 29934.0 42 33115.5 43 36297.0 44 36161.0 45 36025.0 46 36145.0 47 36265.0 48 34953.5 49 33642.0 50 31792.5 51 29943.0 52 27732.0 53 25521.0 54 24037.5 55 22554.0 56 21724.5 57 20895.0 58 19686.0 59 18477.0 60 16997.5 61 15518.0 62 13964.0 63 12410.0 64 10918.5 65 9427.0 66 8094.0 67 6761.0 68 5831.0 69 4901.0 70 4278.0 71 3655.0 72 3075.0 73 2495.0 74 1963.0 75 1110.0 76 789.0 77 624.0 78 459.0 79 369.5 80 280.0 81 222.5 82 165.0 83 117.5 84 70.0 85 44.0 86 18.0 87 13.5 88 9.0 89 5.5 90 2.0 91 2.5 92 3.0 93 2.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 449881.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.545729101888924 #Duplication Level Percentage of deduplicated Percentage of total 1 68.50201075602155 27.089619602923094 2 9.256248249785827 7.320901715717275 3 5.170144411104972 6.133713908976067 4 3.389602300961097 5.361771774277876 5 2.549052818549359 5.040207611437968 6 2.026464066411118 4.8082799403003795 7 1.593968313766546 4.412424739324456 8 1.3195889176364302 4.174728469016407 9 1.1120335534936618 3.957855989280413 >10 5.039954063803292 29.46557123212998 >50 0.028596711942106015 0.7641186235994875 >100 0.01065367699803891 0.6641135454673148 >500 5.607198420020478E-4 0.13282270909346297 >1k 0.0011214396840040957 0.6738701384558163 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1565 0.34786977000584596 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1474 0.32764219871477124 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 599 0.13314632091597556 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0051124630735683435 0.0 2 0.0 0.0 0.0 0.027785125399827953 0.0 3 0.0 0.0 0.0 0.03934373756615638 0.0 4 0.0 0.0 0.0 0.05690393681884765 0.0 5 0.0 0.0 0.0 0.09513626936901091 0.0 6 0.0 0.0 0.0 0.17537971152371404 0.0 7 0.0 0.0 0.0 0.22605978025300025 0.0 8 0.0 0.0 0.0 0.6117173208026122 0.0 9 0.0 0.0 0.0 0.8355542910236262 0.0 10 0.0 0.0 0.0 1.148748224530487 0.0 11 0.0 0.0 0.0 1.3565809625212 0.0 12 0.0 0.0 0.0 1.5499654353040027 0.0 13 0.0 0.0 0.0 1.6368773075546645 0.0 14 0.0 0.0 0.0 1.6675520859960744 0.0 15 0.0 0.0 0.0 1.7055621375430392 0.0 16 0.0 0.0 0.0 1.790695761768112 0.0 17 0.0 0.0 0.0 1.880941849066753 0.0 18 0.0 0.0 0.0 2.0332043362578105 0.0 19 0.0 0.0 0.0 2.094998455147028 0.0 20 0.0 0.0 0.0 2.1736859302793405 0.0 21 0.0 0.0 0.0 2.2568190254756257 0.0 22 0.0 0.0 0.0 2.3415080876943013 0.0 23 0.0 0.0 0.0 2.4353106710441206 0.0 24 0.0 0.0 0.0 2.511997617147646 0.0 25 0.0 0.0 0.0 2.573124893027267 0.0 26 0.0 0.0 0.0 2.640031474990053 0.0 27 0.0 0.0 0.0 2.7151624540711876 0.0 28 0.0 0.0 0.0 2.7885151851267334 0.0 29 0.0 0.0 0.0 2.865646693236656 0.0 30 0.0 0.0 0.0 2.978343161858358 0.0 31 0.0 0.0 0.0 3.067477844141006 0.0 32 0.0 0.0 0.0 3.149054972314901 0.0 33 0.0 0.0 0.0 3.2315212245015905 0.0 34 0.0 0.0 0.0 3.3117646666562934 0.0 35 0.0 0.0 0.0 3.420904639226818 0.0 36 0.0 0.0 0.0 3.512928974551048 0.0 37 0.0 0.0 0.0 3.610954896961641 0.0 38 0.0 0.0 0.0 3.7212062745481584 0.0 39 0.0 0.0 0.0 3.861243306563291 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGCT 20 7.0287037E-4 45.0 33 CGGGATA 25 3.887008E-5 45.0 6 ACGTAAG 20 7.0287037E-4 45.0 2 CGTTTTA 895 0.0 43.99441 1 CGTTATT 190 0.0 42.63158 1 GCATAAG 80 0.0 42.1875 2 CGGTCTA 70 0.0 41.785713 31 TCACGAC 65 0.0 41.53846 25 TAAGGCC 65 0.0 41.53846 5 ACGACGG 65 0.0 41.53846 27 CGTTTTT 1520 0.0 41.299343 1 GTTTTAT 1060 0.0 41.179245 2 AGGCGAT 385 0.0 40.909092 7 CGCAGTA 95 0.0 40.263157 37 GTTGATC 325 0.0 40.153847 16 CGCATCG 45 1.9237632E-8 40.000004 21 CGCCAGT 45 1.9237632E-8 40.000004 26 GGTACCT 340 0.0 39.705883 8 CAGTAGC 335 0.0 39.626865 27 ATCCTGC 330 0.0 39.545452 20 >>END_MODULE