##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545686_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1340176 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.865384098804935 31.0 31.0 34.0 31.0 34.0 2 32.536874261291054 34.0 31.0 34.0 31.0 34.0 3 32.50895852485047 34.0 31.0 34.0 31.0 34.0 4 35.994200761691005 37.0 35.0 37.0 35.0 37.0 5 35.76270430152458 37.0 35.0 37.0 35.0 37.0 6 35.77923198147109 37.0 35.0 37.0 35.0 37.0 7 35.761806658229965 37.0 35.0 37.0 35.0 37.0 8 35.73045331359463 37.0 35.0 37.0 33.0 37.0 9 37.91102288057688 39.0 38.0 39.0 35.0 39.0 10 37.85104195269875 39.0 38.0 39.0 35.0 39.0 11 37.65662047372882 39.0 38.0 39.0 35.0 39.0 12 37.17458900920476 39.0 37.0 39.0 33.0 39.0 13 36.92999277706809 39.0 37.0 39.0 33.0 39.0 14 37.60417064624348 40.0 35.0 41.0 33.0 41.0 15 37.479896670288085 40.0 35.0 41.0 32.0 41.0 16 37.50804595814281 40.0 35.0 41.0 32.0 41.0 17 37.60387963968912 40.0 35.0 41.0 33.0 41.0 18 37.667954059765286 40.0 35.0 41.0 33.0 41.0 19 37.632947463616716 40.0 35.0 41.0 33.0 41.0 20 37.56474149663925 39.0 35.0 41.0 33.0 41.0 21 37.543955420780556 39.0 35.0 41.0 32.0 41.0 22 37.47029942335932 39.0 35.0 41.0 32.0 41.0 23 37.389238428385525 39.0 35.0 41.0 32.0 41.0 24 37.374829873091294 39.0 35.0 41.0 32.0 41.0 25 37.28664966392474 39.0 35.0 41.0 32.0 41.0 26 37.17607761965593 39.0 35.0 41.0 32.0 41.0 27 37.08877341483507 39.0 35.0 41.0 32.0 41.0 28 36.97416234882583 39.0 35.0 41.0 31.0 41.0 29 36.919826201931684 39.0 35.0 41.0 31.0 41.0 30 36.849172049044306 39.0 35.0 41.0 31.0 41.0 31 36.76818641730638 39.0 35.0 41.0 31.0 41.0 32 36.698220979930994 39.0 35.0 41.0 31.0 41.0 33 36.5897971609699 39.0 35.0 41.0 31.0 41.0 34 36.500483518582634 39.0 35.0 41.0 30.0 41.0 35 36.41501862441948 38.0 35.0 41.0 30.0 41.0 36 36.29549477083607 38.0 35.0 41.0 30.0 41.0 37 36.1674712873533 38.0 35.0 41.0 30.0 41.0 38 36.09018740822101 38.0 35.0 41.0 30.0 41.0 39 36.00852723821349 38.0 35.0 40.0 30.0 41.0 40 35.95733246976516 38.0 35.0 40.0 30.0 41.0 41 35.8842890784494 38.0 35.0 40.0 30.0 41.0 42 35.697943404448374 38.0 35.0 40.0 29.0 41.0 43 35.59259455474505 37.0 34.0 40.0 29.0 41.0 44 35.50925923162331 37.0 34.0 40.0 29.0 41.0 45 35.4760755303781 37.0 34.0 40.0 28.0 41.0 46 35.38910262532682 37.0 34.0 40.0 28.0 41.0 47 35.287004841155195 37.0 34.0 40.0 28.0 41.0 48 35.22699332028032 37.0 34.0 40.0 28.0 41.0 49 35.192519489977435 36.0 34.0 40.0 28.0 41.0 50 35.06802315516768 36.0 34.0 40.0 28.0 41.0 51 34.91788093504137 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 8.0 11 12.0 12 19.0 13 21.0 14 21.0 15 42.0 16 90.0 17 183.0 18 435.0 19 785.0 20 1482.0 21 2407.0 22 3550.0 23 4922.0 24 7031.0 25 9944.0 26 13269.0 27 16125.0 28 18827.0 29 22257.0 30 27253.0 31 33419.0 32 41403.0 33 53665.0 34 86803.0 35 165646.0 36 100775.0 37 138266.0 38 206761.0 39 384547.0 40 202.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.1997110827234634 90.80993839615095 3.512598345291962 3.477752175833622 2 3.6060189109490097 2.732476928403434 90.8297119184346 2.831792242212963 3 28.501405785508773 15.853365528109741 42.77818734255799 12.867041343823498 4 27.07510058380392 15.936041236374923 43.38564487052447 13.603213309296688 5 23.92849894342236 14.317298623464382 46.80295722352885 14.951245209584412 6 23.417222812526116 15.059066868829168 47.05404364799847 14.469666670646244 7 23.189043827079427 17.31787466720789 44.93469514451833 14.55838636119435 8 26.21304962930242 20.647138883251152 42.38480617471138 10.755005312735044 9 83.20705638662385 3.9122473466171606 9.064854168407733 3.815842098351261 10 83.81249925382934 4.25093420565657 8.521343465335898 3.4152230751781856 11 77.52034061197932 6.850443523835676 9.732826136268669 5.8963897279163335 12 44.61749800026265 22.561962010959753 15.239640166664678 17.580899822112915 13 35.94938276763649 23.24023113382123 22.71164384379365 18.09874225474863 14 30.20163023364095 23.14016964935949 26.447944150619023 20.210255966380537 15 23.47385716502907 25.475609173720464 30.97100679313762 20.079526868112847 16 18.436608326070605 31.880066498728528 29.50948233664832 20.173842838552545 17 18.12612671768484 22.980265278590277 37.9392706629577 20.954337340767182 18 21.64215744797698 20.493726197156196 36.7077160014804 21.15640035338642 19 22.638742971072457 20.475071930850874 29.104908609018516 27.781276489058154 20 22.57681080693879 21.566421126777378 31.797763875789446 24.05900419049438 21 27.494970809804087 23.556980575685582 27.208888981745684 21.73915963276465 22 28.646386743233727 22.38206026671124 26.615384844975587 22.35616814507945 23 26.400786165399172 23.56556153818603 27.84843184775731 22.18522044865749 24 28.369408197132316 22.27759637540144 23.93685605472714 25.416139372739107 25 27.760756796122298 23.786054965914925 24.205477489523762 24.24771074843901 26 27.218514583159227 20.3812036628025 29.11304186912764 23.287239884910637 27 28.821139909981973 21.83772877592197 26.718505629111398 22.62262568498466 28 24.374186673989087 25.798029512541635 25.473743747089934 24.35404006637934 29 23.782025644392977 25.739678967538595 26.349822709853033 24.1284726782154 30 22.68433399792266 25.03977089576295 28.419923950287124 23.855971156027266 31 22.634788266615725 24.007966117883026 29.176167906304844 24.181077709196405 32 24.82345602368644 24.92344289108296 27.11576688434952 23.137334200881078 33 25.478220771003212 26.466374565728678 23.47139480187677 24.58400986139134 34 27.918944974391422 24.331580329747734 25.935101061353134 21.814373634507707 35 26.269609364740155 25.03544310598011 24.006249925382935 24.6886976038968 36 23.643834839603155 27.084726185217463 25.700281157101756 23.571157818077626 37 24.18488317952269 24.390975513663875 28.139214550924656 23.28492675588878 38 25.463894294480728 27.06055025608577 23.881564809398167 23.59399064003534 39 25.09416673630926 28.73048017573811 25.166097587182577 21.00925550077005 40 23.586976635904538 26.64687324649897 26.110227313427494 23.655922804169006 41 23.114352144792925 27.629356144267618 24.563937870846814 24.692353840092647 42 25.59917503372691 24.43470111388355 26.929298838361525 23.036825014028008 43 22.344826351165818 24.770179439118444 27.538099473501987 25.34689473621375 44 22.771113644775014 25.46128269719798 25.322196487625504 26.4454071704015 45 23.09793639044424 22.529354353458054 27.346109764687622 27.026599491410085 46 23.58988670144817 24.725483817050893 26.23625553658624 25.4483739449147 47 21.90346641038192 25.830264084717232 27.15770167500388 25.108567829896966 48 22.78409701412352 26.790809565310823 25.03312997695825 25.391963443607406 49 23.17285192392641 24.897401535320736 28.33657668843495 23.593169852317907 50 22.856550184453386 23.076297441530066 29.670580580461074 24.396571793555474 51 21.96554780864603 24.031022791036403 27.488628359260275 26.514801041057297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 575.0 1 1280.0 2 1985.0 3 4145.5 4 6306.0 5 4329.0 6 2352.0 7 2370.0 8 2388.0 9 2463.0 10 2538.0 11 2660.5 12 2783.0 13 2981.0 14 3179.0 15 3197.5 16 3216.0 17 3048.5 18 2881.0 19 2831.5 20 2782.0 21 3867.5 22 4953.0 23 4840.0 24 4727.0 25 7192.5 26 10992.0 27 12326.0 28 13603.5 29 14881.0 30 17859.5 31 20838.0 32 23006.5 33 25175.0 34 28761.5 35 32348.0 36 37151.5 37 41955.0 38 49356.0 39 56757.0 40 69279.5 41 81802.0 42 96021.0 43 110240.0 44 116810.0 45 123380.0 46 118293.0 47 113206.0 48 99739.5 49 86273.0 50 82665.0 51 79057.0 52 78616.5 53 78176.0 54 79307.5 55 80439.0 56 82164.5 57 83890.0 58 78732.0 59 73574.0 60 65141.5 61 56709.0 62 48132.0 63 39555.0 64 34606.5 65 29658.0 66 23343.0 67 17028.0 68 14804.5 69 12581.0 70 10695.5 71 8810.0 72 6808.5 73 4807.0 74 4013.0 75 2450.0 76 1681.0 77 1259.5 78 838.0 79 677.5 80 517.0 81 299.5 82 82.0 83 57.0 84 32.0 85 23.0 86 14.0 87 7.5 88 1.0 89 1.5 90 2.0 91 2.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1340176.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.793379484678955 #Duplication Level Percentage of deduplicated Percentage of total 1 72.84819299493559 12.233673497370845 2 10.797259436010991 3.6264495020692644 3 4.40849868965886 2.2210077435945346 4 2.2993815542869545 1.54457548084847 5 1.357373836856763 1.139744697245516 6 0.8499232954666345 0.8563850660184065 7 0.5953183015318291 0.6998184306258977 8 0.4106637607671687 0.5517145900134781 9 0.326454201758448 0.49340423650478094 >10 2.9490275772962713 11.867320644035468 >50 1.5102642523095737 18.744911031195585 >100 1.6324770121230843 43.10094372604091 >500 0.009366671381034091 1.0534476259183156 >1k 0.005798415616830628 1.866603728518517 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGC 4870 0.3633851076276549 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3716 0.27727701436229274 No Hit ATGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCT 2188 0.1632621387041702 No Hit ATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTG 1884 0.14057855087689974 No Hit ATGTCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 1703 0.1270728620718473 No Hit ATGCCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 1611 0.12020809207148912 No Hit ATTGCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 1512 0.11282100261458196 No Hit CTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTCTGCT 1509 0.11259715141891811 No Hit ATATCTGTCTCTTATACACATCTGACGCGCTTAACATCGTATGCCGTCTTC 1409 0.10513544489678966 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11968577261494012 0.0 2 7.461706522128437E-5 0.0 0.0 0.6149192344886045 0.0 3 7.461706522128437E-5 0.0 0.0 0.8198176955862514 0.0 4 7.461706522128437E-5 0.0 0.0 1.1136596984276692 0.0 5 7.461706522128437E-5 0.0 0.0 2.2488837287042895 0.0 6 7.461706522128437E-5 0.0 0.0 2.5267576795883526 0.0 7 7.461706522128437E-5 0.0 0.0 2.96871455689402 0.0 8 1.4923413044256874E-4 0.0 0.0 4.245188691634532 0.0 9 1.4923413044256874E-4 0.0 0.0 4.405316913599408 0.0 10 1.4923413044256874E-4 0.0 0.0 4.707516027745609 0.0 11 1.4923413044256874E-4 0.0 0.0 4.983002232542591 0.0 12 1.4923413044256874E-4 0.0 0.0 5.690148159644703 0.0 13 1.4923413044256874E-4 0.0 0.0 6.269624288153198 0.0 14 1.4923413044256874E-4 0.0 0.0 6.516159071644322 0.0 15 2.238511956638531E-4 0.0 0.0 6.645918148064135 0.0 16 2.238511956638531E-4 0.0 0.0 6.7497851028521625 0.0 17 2.238511956638531E-4 0.0 0.0 6.8832750325330405 0.0 18 2.238511956638531E-4 0.0 0.0 7.17719165243968 0.0 19 2.238511956638531E-4 0.0 0.0 7.511326870500591 0.0 20 2.238511956638531E-4 0.0 0.0 7.906200379651628 0.0 21 2.9846826088513747E-4 0.0 0.0 8.160495337925765 0.0 22 2.9846826088513747E-4 0.0 0.0 8.447621804897267 0.0 23 3.7308532610642186E-4 0.0 0.0 8.870999032962835 0.0 24 4.477023913277062E-4 0.0 0.0 9.232593331025178 0.0 25 4.477023913277062E-4 0.0 0.0 9.602843208653193 0.0 26 6.715535869915593E-4 0.0 0.0 9.931979083344277 0.0 27 7.461706522128437E-4 0.0 0.0 10.208509927054356 0.0 28 7.461706522128437E-4 0.0 0.0 10.451239240219195 0.0 29 7.461706522128437E-4 0.0 0.0 10.68620837860102 0.0 30 8.207877174341281E-4 0.0 0.0 10.93371318394002 0.0 31 8.207877174341281E-4 0.0 0.0 11.186888886235838 0.0 32 8.207877174341281E-4 0.0 0.0 11.465732858967778 0.0 33 8.207877174341281E-4 0.0 0.0 11.73838361528635 0.0 34 8.207877174341281E-4 0.0 0.0 12.022525399649002 0.0 35 8.207877174341281E-4 0.0 0.0 12.300399350533064 0.0 36 8.207877174341281E-4 0.0 0.0 12.581631069352085 0.0 37 8.954047826554124E-4 0.0 0.0 12.889948782846432 0.0 38 8.954047826554124E-4 0.0 0.0 13.170882033404569 0.0 39 8.954047826554124E-4 0.0 0.0 13.465395589832978 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGATCTA 25 3.8911527E-5 45.000004 40 CGAACTA 25 3.8911527E-5 45.000004 18 CGAAACG 25 3.8911527E-5 45.000004 42 TCCGATA 25 3.8911527E-5 45.000004 2 GAACTAC 25 3.8911527E-5 45.000004 30 ATTCGTT 230 0.0 45.000004 1 CGTCTAG 25 3.8911527E-5 45.000004 3 CGTTAAT 25 3.8911527E-5 45.000004 24 ATCCGAT 25 3.8911527E-5 45.000004 1 TCTACGA 25 3.8911527E-5 45.000004 25 ATCCCGC 25 3.8911527E-5 45.000004 4 AACGCGC 25 3.8911527E-5 45.000004 1 TCGTAAT 25 3.8911527E-5 45.000004 2 GTGCGAC 25 3.8911527E-5 45.000004 14 CTTACCG 25 3.8911527E-5 45.000004 12 AGCGTAA 20 7.033706E-4 45.0 26 CGTATGA 20 7.033706E-4 45.0 25 AGGAACG 20 7.033706E-4 45.0 33 CCCACGT 20 7.033706E-4 45.0 22 CATTACG 20 7.033706E-4 45.0 22 >>END_MODULE