##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545684_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 934677 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.973598366066565 31.0 31.0 34.0 31.0 34.0 2 32.65116612476824 34.0 31.0 34.0 31.0 34.0 3 32.583418656926405 34.0 31.0 34.0 31.0 34.0 4 36.03045330097991 37.0 35.0 37.0 35.0 37.0 5 35.8044468837898 37.0 35.0 37.0 35.0 37.0 6 35.81282838884449 37.0 35.0 37.0 35.0 37.0 7 35.79155258982515 37.0 35.0 37.0 35.0 37.0 8 35.7436087546821 37.0 35.0 37.0 33.0 37.0 9 37.920536185227625 39.0 38.0 39.0 35.0 39.0 10 37.873988554334815 39.0 38.0 39.0 35.0 39.0 11 37.70867476144166 39.0 38.0 39.0 35.0 39.0 12 37.20217358509945 39.0 37.0 39.0 33.0 39.0 13 36.997804589178934 39.0 37.0 39.0 33.0 39.0 14 37.63705001834858 39.0 35.0 41.0 33.0 41.0 15 37.49080805454719 40.0 35.0 41.0 33.0 41.0 16 37.52000958619929 40.0 35.0 41.0 33.0 41.0 17 37.63872118389561 40.0 35.0 41.0 33.0 41.0 18 37.718783066235716 40.0 35.0 41.0 33.0 41.0 19 37.70214202339418 39.0 35.0 41.0 33.0 41.0 20 37.666765096391586 39.0 36.0 41.0 33.0 41.0 21 37.658202780211774 39.0 36.0 41.0 33.0 41.0 22 37.5889617482831 39.0 35.0 41.0 33.0 41.0 23 37.513997883760915 39.0 35.0 41.0 33.0 41.0 24 37.45221611315995 39.0 35.0 41.0 33.0 41.0 25 37.42116688438894 39.0 35.0 41.0 33.0 41.0 26 37.351570649539894 39.0 35.0 41.0 33.0 41.0 27 37.26366006652565 39.0 35.0 41.0 32.0 41.0 28 37.17670489377614 39.0 35.0 41.0 32.0 41.0 29 37.09305781569462 39.0 35.0 41.0 32.0 41.0 30 37.00938399040524 39.0 35.0 41.0 32.0 41.0 31 36.96801461895393 39.0 35.0 41.0 31.0 41.0 32 36.88142320823129 39.0 35.0 41.0 31.0 41.0 33 36.71586334102583 39.0 35.0 41.0 31.0 41.0 34 36.631264062344535 39.0 35.0 41.0 31.0 41.0 35 36.57994793923462 39.0 35.0 41.0 31.0 41.0 36 36.48652529162481 38.0 35.0 41.0 30.0 41.0 37 36.374525103324466 38.0 35.0 41.0 30.0 41.0 38 36.299206035881916 38.0 35.0 41.0 30.0 41.0 39 36.26463794444498 38.0 35.0 41.0 30.0 41.0 40 36.196704316036445 38.0 35.0 41.0 30.0 41.0 41 36.19176143202411 38.0 35.0 41.0 30.0 41.0 42 36.01746699662022 38.0 35.0 40.0 30.0 41.0 43 35.95067814870806 38.0 35.0 40.0 30.0 41.0 44 35.919403173502715 38.0 35.0 40.0 30.0 41.0 45 35.888498379654145 38.0 35.0 40.0 30.0 41.0 46 35.82103657199225 38.0 35.0 40.0 30.0 41.0 47 35.73391342677738 38.0 35.0 40.0 29.0 41.0 48 35.70876356217175 38.0 35.0 40.0 30.0 41.0 49 35.70990620289148 38.0 35.0 40.0 29.0 41.0 50 35.63195841986055 37.0 35.0 40.0 29.0 41.0 51 35.52233124384146 37.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 6.0 11 7.0 12 6.0 13 6.0 14 4.0 15 21.0 16 40.0 17 80.0 18 177.0 19 418.0 20 736.0 21 1239.0 22 1908.0 23 2783.0 24 4328.0 25 6049.0 26 8524.0 27 10361.0 28 11959.0 29 14137.0 30 17553.0 31 22148.0 32 28162.0 33 36658.0 34 59482.0 35 124935.0 36 64501.0 37 86351.0 38 130716.0 39 301213.0 40 167.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 1.7328981027670523 91.58029993249005 2.931814947837595 3.7549870169053055 2 3.549889427042711 2.805996082068993 90.54347116704487 3.100643323843424 3 26.419929023609225 15.537560034108038 44.217093177643186 13.82541776463955 4 26.716716042012372 16.05228330214609 43.88200415758599 13.348996498255547 5 23.379734389527076 14.710536367108636 47.00618502434531 14.903544219018977 6 19.931591341179892 15.489629037624763 48.93658450994301 15.642195111252336 7 23.272638569259755 17.12334849365075 45.59457438238022 14.009438554709275 8 23.755158199035602 19.372146741601647 43.685465674238266 13.187229385124489 9 79.87058630949515 4.641068518857317 10.611901223631264 4.8764439480162665 10 81.03152211940595 4.552909721754146 10.634047911738493 3.7815202471014056 11 74.06911692488421 7.2486003186127395 11.351515015347548 7.330767741155501 12 38.942008843696804 27.14873694335048 17.90404599663841 16.005208216314298 13 32.79710531017667 24.66606110988074 27.433434223801378 15.103399356141212 14 30.60511813171823 25.078931010391827 26.220929797138474 18.095021060751467 15 20.645741791014434 33.00894319641973 30.058405203080852 16.286909809484985 16 13.778128701144887 38.40567383170871 28.781814466387857 19.034383000758552 17 13.548423680052037 27.76231789163529 41.33246030446882 17.356798123843852 18 16.677419044225974 22.714049880332993 40.69416493612232 19.914366139318716 19 16.36255091331016 23.54588804474701 30.43094031414061 29.660620727802222 20 18.886203469219847 24.64765903087377 34.18592733104591 22.280210168860474 21 24.20172958144899 26.728377824638887 29.44279146699876 19.627101126913363 22 25.537164175431727 24.262820204198885 27.967950425655065 22.232065194714323 23 20.46386077757343 29.13819426390079 29.46985964135204 20.92808531717374 24 24.916842930766457 24.631503717326947 25.924463745229637 24.52718960667696 25 22.26929730805401 29.453062394816605 23.72252660544766 24.555113691681726 26 20.692816876846226 22.808734996153753 35.60192451509987 20.896523611900154 27 22.58480737195844 26.259124809961087 30.67851247008325 20.477555347997225 28 18.980246652051992 31.941515625183886 27.550266027729364 21.527971695034758 29 18.93017587894 30.189787488084118 28.943260613024606 21.936776019951274 30 18.478148066123374 29.51661376068952 32.50941234244557 19.495825830741527 31 17.169888635325357 27.897123819244506 30.83375326449672 24.099234280933413 32 19.5881571922707 29.936330946412504 30.456296667190912 20.019215194125888 33 20.949590072292352 29.60252579233254 28.000475030411575 21.447409104963533 34 23.41792940234969 26.77684376527934 27.228764589264525 22.576462243106445 35 23.803731128507494 26.847563382858464 26.74132347324263 22.607382015391416 36 18.919049040470664 25.24080511235432 32.33994203345113 23.500203813723886 37 18.008574084951274 25.553319488978545 32.66133648308453 23.776769942985652 38 21.992196234635067 28.701786820473814 26.26276243022991 23.043254514661214 39 20.714107654301966 30.716493505242987 29.721069417563502 18.848329422891545 40 19.82139284480093 27.269313356378728 30.919130351982556 21.990163446837784 41 19.773675825980526 29.446536076099015 26.473851394652915 24.305936703267548 42 23.276811133685754 23.913180703066406 29.126318503611408 23.683689659636432 43 18.30899872362324 24.369381080309026 30.725908522409345 26.595711673658386 44 18.680570935200073 26.995849903228603 27.570379928039312 26.75319923353201 45 19.535197720709935 26.568429521642233 28.48288767135599 25.413485086291843 46 22.57111280153465 26.28405320768565 28.80235632202354 22.342477668756157 47 17.478979369343634 29.16429953877115 28.731422726781553 24.625298365103667 48 16.99667371723066 29.5171487048467 27.575515391948237 25.910662185974402 49 19.462659292996403 24.947120770062813 31.423475703371324 24.166744233569457 50 19.285699765801446 22.758985189536066 34.17801015751966 23.77730488714283 51 17.59121065351988 23.85326695746231 31.03917182085362 27.51635056816419 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1125.0 1 1036.5 2 948.0 3 2831.0 4 4714.0 5 3244.0 6 1774.0 7 1997.5 8 2221.0 9 2431.0 10 2641.0 11 2949.5 12 3258.0 13 3134.0 14 3010.0 15 3256.5 16 3503.0 17 3255.5 18 3008.0 19 3276.0 20 3544.0 21 4016.0 22 4488.0 23 5065.5 24 5643.0 25 7024.0 26 11033.0 27 13661.0 28 15460.0 29 17259.0 30 20888.0 31 24517.0 32 25294.5 33 26072.0 34 31345.5 35 36619.0 36 41203.0 37 45787.0 38 54065.5 39 62344.0 40 72427.0 41 82510.0 42 91935.5 43 101361.0 44 108983.0 45 116605.0 46 107853.5 47 99102.0 48 81401.0 49 63700.0 50 53686.0 51 43672.0 52 40191.5 53 36711.0 54 32681.5 55 28652.0 56 27814.0 57 26976.0 58 25278.5 59 23581.0 60 19116.0 61 14651.0 62 11486.5 63 8322.0 64 6999.0 65 5676.0 66 4183.5 67 2691.0 68 2620.0 69 2549.0 70 2211.5 71 1874.0 72 1354.5 73 835.0 74 598.5 75 271.0 76 180.0 77 140.0 78 100.0 79 56.0 80 12.0 81 11.5 82 11.0 83 6.5 84 2.0 85 1.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 934677.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.18054016382966 #Duplication Level Percentage of deduplicated Percentage of total 1 70.10774812790076 12.745967306349534 2 11.894538755150442 4.324982791364822 3 5.412892977512838 2.952279545405511 4 2.8110748283089864 2.044274352784084 5 1.7491120196024383 1.5899900661709674 6 1.1028142070599223 1.2029854790816927 7 0.7887214046513167 1.0037566822734787 8 0.547102817042653 0.7957299791190644 9 0.45915674342764495 0.7512945853841577 >10 2.737829593370876 10.346564048419152 >50 0.8642728668390708 11.640684273536172 >100 1.5022870132411188 44.96566579997319 >500 0.01240583062448427 1.5979305120836205 >1k 0.00945206142817849 3.2663168929618944 >5k 5.907538392611556E-4 0.771577685092669 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 7184 0.768607765035408 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3024 0.32353422626212053 No Hit CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 2791 0.29860582853755896 No Hit ATCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTG 2775 0.2968940072345848 No Hit ATGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCT 2528 0.27046776586992083 No Hit CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 2227 0.23826412760771903 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 2222 0.2377291834505396 No Hit ATGCCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 2126 0.22745825563269448 No Hit ATTGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 2027 0.21686636132054174 No Hit ATATCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 1666 0.17824339317218676 No Hit ATGTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 1649 0.17642458303777667 No Hit ATGGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 1585 0.16957729782587996 No Hit ATTTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 1440 0.15406391726767643 No Hit ATACCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 1198 0.12817262006019192 No Hit ATAGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 1095 0.1171527704222956 No Hit ATTTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 1042 0.11148236235619363 No Hit ATTGTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 1017 0.10880764157029647 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3313444109569402 0.0 2 0.0 0.0 0.0 1.4686356891204126 0.0 3 0.0 0.0 0.0 1.9358559160009288 0.0 4 0.0 0.0 0.0 2.5406637801079945 0.0 5 0.0 0.0 0.0 4.69220918028367 0.0 6 0.0 0.0 0.0 5.201048062592746 0.0 7 0.0 0.0 0.0 6.000040655755946 0.0 8 1.069888314358864E-4 0.0 0.0 8.292276369269812 0.0 9 1.069888314358864E-4 0.0 0.0 8.595268739896243 0.0 10 1.069888314358864E-4 0.0 0.0 9.189805676185463 0.0 11 1.069888314358864E-4 0.0 0.0 9.661091478660543 0.0 12 2.139776628717728E-4 0.0 0.0 10.847811596947395 0.0 13 2.139776628717728E-4 0.0 0.0 11.8635635625997 0.0 14 2.139776628717728E-4 0.0 0.0 12.321154794650987 0.0 15 2.139776628717728E-4 0.0 0.0 12.549896916260911 0.0 16 2.139776628717728E-4 0.0 0.0 12.705779643662998 0.0 17 2.139776628717728E-4 0.0 0.0 12.956775442211587 0.0 18 3.209664943076592E-4 0.0 0.0 13.456520273848612 0.0 19 3.209664943076592E-4 0.0 0.0 14.167568047571514 0.0 20 3.209664943076592E-4 0.0 0.0 15.000048144974146 0.0 21 3.209664943076592E-4 0.0 0.0 15.43795343204123 0.0 22 3.209664943076592E-4 0.0 0.0 15.944331571227279 0.0 23 5.34944157179432E-4 0.0 0.0 16.612904778870135 0.0 24 5.34944157179432E-4 0.0 0.0 17.22627174949207 0.0 25 6.419329886153184E-4 0.0 0.0 17.83642905517093 0.0 26 6.419329886153184E-4 0.0 0.0 18.274869286395194 0.0 27 9.628994829229777E-4 0.0 0.0 18.704429444610277 0.0 28 0.0011768771457947504 0.0 0.0 19.079211321130188 0.0 29 0.0011768771457947504 0.0 0.0 19.465654980276607 0.0 30 0.0011768771457947504 0.0 0.0 19.832519683270263 0.0 31 0.0011768771457947504 0.0 0.0 20.22217300735976 0.0 32 0.0011768771457947504 0.0 0.0 20.68650453579151 0.0 33 0.0011768771457947504 0.0 0.0 21.09113629628203 0.0 34 0.0012838659772306368 0.0 0.0 21.52133838748573 0.0 35 0.0012838659772306368 0.0 0.0 21.933887321502507 0.0 36 0.0013908548086665232 0.0 0.0 22.306636410225135 0.0 37 0.0013908548086665232 0.0 0.0 22.768507195533857 0.0 38 0.001604832471538296 0.0 0.0 23.206091516106632 0.0 39 0.001604832471538296 0.0 0.0 23.623561936369462 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCAACGA 35 1.2116107E-7 45.000004 11 TACGGTA 35 1.2116107E-7 45.000004 25 AGAACCG 35 1.2116107E-7 45.000004 30 GTAATAC 35 1.2116107E-7 45.000004 24 GTTACCG 35 1.2116107E-7 45.000004 18 TACGCTA 35 1.2116107E-7 45.000004 2 CCCGTAT 35 1.2116107E-7 45.000004 41 TGTTACG 35 1.2116107E-7 45.000004 3 CTCGCTA 35 1.2116107E-7 45.000004 42 TCTCCGA 35 1.2116107E-7 45.000004 24 ATGCGTC 70 0.0 45.000004 1 GCGTGCA 35 1.2116107E-7 45.000004 11 CGGTATG 70 0.0 45.000004 3 CGACTGA 35 1.2116107E-7 45.000004 25 CGGTAAC 35 1.2116107E-7 45.000004 27 CGTCCGG 70 0.0 45.000004 4 CATCAGG 35 1.2116107E-7 45.000004 20 CGATAGG 35 1.2116107E-7 45.000004 4 TAGTCAG 35 1.2116107E-7 45.000004 34 TCGCGGT 35 1.2116107E-7 45.000004 13 >>END_MODULE