##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545683_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 764288 Sequences flagged as poor quality 0 Sequence length 52 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.60286174845085 33.0 31.0 34.0 31.0 34.0 2 32.98292135948752 34.0 31.0 34.0 31.0 34.0 3 33.0472099522693 34.0 33.0 34.0 31.0 34.0 4 36.419887529308326 37.0 37.0 37.0 35.0 37.0 5 36.39956011346508 37.0 37.0 37.0 35.0 37.0 6 36.39874235890136 37.0 37.0 37.0 35.0 37.0 7 36.48240846382515 37.0 37.0 37.0 35.0 37.0 8 36.53958193769888 37.0 37.0 37.0 35.0 37.0 9 38.335887780522526 39.0 39.0 39.0 37.0 39.0 10 38.091655239909564 39.0 39.0 39.0 35.0 39.0 11 37.93611701348183 39.0 38.0 39.0 35.0 39.0 12 37.53898268715458 39.0 37.0 39.0 35.0 39.0 13 37.44688258876235 39.0 37.0 39.0 35.0 39.0 14 38.761626507285214 41.0 38.0 41.0 35.0 41.0 15 38.80562562803551 41.0 38.0 41.0 35.0 41.0 16 38.87435233838553 41.0 38.0 41.0 35.0 41.0 17 38.850196522776756 41.0 38.0 41.0 35.0 41.0 18 38.85822490998158 41.0 38.0 41.0 35.0 41.0 19 38.826552294423045 40.0 37.0 41.0 35.0 41.0 20 38.7546095189248 40.0 37.0 41.0 35.0 41.0 21 38.71089693937364 40.0 37.0 41.0 35.0 41.0 22 38.773103856138 40.0 37.0 41.0 35.0 41.0 23 38.788443623346176 41.0 37.0 41.0 35.0 41.0 24 38.77986308825992 41.0 37.0 41.0 35.0 41.0 25 38.71529318790822 40.0 37.0 41.0 35.0 41.0 26 38.62106692765031 40.0 37.0 41.0 35.0 41.0 27 38.53674531066823 40.0 36.0 41.0 35.0 41.0 28 38.51487135739407 40.0 36.0 41.0 35.0 41.0 29 38.471862700971364 40.0 36.0 41.0 35.0 41.0 30 38.432962443476804 40.0 36.0 41.0 35.0 41.0 31 38.290472963071515 40.0 36.0 41.0 35.0 41.0 32 38.23014230237816 40.0 36.0 41.0 35.0 41.0 33 38.197591745520015 40.0 36.0 41.0 35.0 41.0 34 38.09642700133981 40.0 36.0 41.0 34.0 41.0 35 38.05760524828337 40.0 36.0 41.0 34.0 41.0 36 37.969909248869534 40.0 35.0 41.0 34.0 41.0 37 37.91701295846592 40.0 35.0 41.0 34.0 41.0 38 37.844977286049236 40.0 35.0 41.0 34.0 41.0 39 37.82689509713616 40.0 35.0 41.0 34.0 41.0 40 37.685351595210186 40.0 35.0 41.0 34.0 41.0 41 37.61193293627533 40.0 35.0 41.0 34.0 41.0 42 37.60831519008541 40.0 35.0 41.0 34.0 41.0 43 37.52500628035505 40.0 35.0 41.0 33.0 41.0 44 37.40657710182549 40.0 35.0 41.0 33.0 41.0 45 37.329104997069166 39.0 35.0 41.0 33.0 41.0 46 37.361902842907384 39.0 35.0 41.0 33.0 41.0 47 37.37077515282197 39.0 35.0 41.0 33.0 41.0 48 37.31649587590019 39.0 35.0 41.0 34.0 41.0 49 37.31428990118908 39.0 35.0 41.0 34.0 41.0 50 37.22885613800033 39.0 35.0 41.0 33.0 41.0 51 37.140299206581815 39.0 35.0 41.0 33.0 41.0 52 36.770129846340645 38.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 2.0 11 2.0 12 5.0 13 10.0 14 15.0 15 14.0 16 12.0 17 31.0 18 64.0 19 140.0 20 247.0 21 410.0 22 642.0 23 1103.0 24 1713.0 25 2292.0 26 2627.0 27 3231.0 28 3948.0 29 5117.0 30 6511.0 31 8461.0 32 11179.0 33 16347.0 34 37420.0 35 96058.0 36 39589.0 37 52334.0 38 95577.0 39 378644.0 40 543.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.145526293753143 13.983603039691845 46.08223601574276 12.78863465081226 2 24.98521499748786 13.859173505275498 48.43841588511137 12.717195612125273 3 24.99319628202981 14.602741374979065 44.92638900519176 15.477673337799363 4 20.515041450343325 15.344739155920282 48.476228856138 15.663990537598394 5 23.59921914252219 17.188939248032156 44.591436735890134 14.620404873555518 6 22.676006950259588 19.013644071344835 44.52549300787138 13.784855970524202 7 82.55395871713282 3.286064938871211 8.190368028805896 5.969608315190086 8 84.60227034835036 2.9751873639256408 8.571637916596885 3.8509043711271147 9 76.11829572098476 4.602191843912243 10.932658892982749 8.346853542120247 10 39.14152780103835 26.348444565399433 16.02498011220901 18.485047521353206 11 32.198856975381005 22.624717384022777 29.253370457209847 15.923055183386367 12 30.50590876737565 25.511848936526544 25.532260090437113 18.449982205660692 13 21.06758185396081 30.924991626193265 32.52870645620499 15.47872006364093 14 13.838762351364931 39.00479923798359 28.482718556355717 18.67371985429576 15 13.437997194774745 27.10130212694691 40.425729567911574 19.034971110366772 16 16.427707879752134 24.169161363255736 38.47489428069 20.928236476302125 17 15.763952855468096 24.730468095796347 28.494232540612963 31.011346508122596 18 18.29532846256908 25.33416722492045 32.13971696533244 24.230787347178026 19 22.60064268966672 27.925075364260593 29.520808909730363 19.95347303634232 20 25.114093116730867 22.884043711271143 26.894835454697706 25.107027717300284 21 19.701473789984927 30.342357854630713 29.92353667727349 20.032631678110867 22 24.49809495896835 24.175180036844747 25.615082272651147 25.711642731535754 23 22.480138377156255 29.89985450510802 22.238213867023948 25.381793250711777 24 21.174871252721488 21.68292580807235 33.70404873555518 23.438154203650978 25 25.09629877742422 24.884075113046393 28.19447642773405 21.825149681795345 26 18.218132431753475 31.32392501256071 26.873639256405962 23.584303299279853 27 17.738470314855135 29.08811861497237 28.56501737564897 24.60839369452353 28 19.117269929660026 30.01604107352202 30.4751611957796 20.391527801038354 29 17.460433763188746 28.211224041199127 29.752920365097975 24.575421830514152 30 21.007918480991457 29.446883897169652 30.150545344163454 19.39465227767543 31 20.009734550326577 30.965944774744596 26.119604128286717 22.904716546642103 32 23.300771436945237 27.57272127784291 24.4834407971864 24.643066488025454 33 24.058470105509965 25.875324485010886 26.217211313012896 23.848994096466253 34 16.74617421704907 24.2897965164964 34.35642061631218 24.607608650142353 35 17.099575029308323 24.34108608273321 32.167324359403786 26.39201452855468 36 21.062871587673758 26.914592404957293 25.914053341148886 26.108482666220063 37 22.18195235303969 29.138884818288396 29.221576159772233 19.457586668899683 38 18.672934809914587 25.630259797353876 33.17388209680121 22.52292329593033 39 19.823679031987943 28.69690483168649 26.384033244012727 25.095382892312845 40 23.717237481158936 22.04836396750963 29.85353688661866 24.38086166471278 41 17.975684558700387 23.385948752302795 31.091944397923292 27.546422291073526 42 18.800635362585833 26.888947621838888 26.76491060961313 27.54550640596215 43 19.47237167141182 25.096822140344997 29.15615579467426 26.274650393568916 44 25.93394113213867 24.574113423212193 26.093828504438115 23.39811694021102 45 17.98288079886116 26.79997592530564 28.35541052587506 26.86173274995813 46 17.239705451348183 27.810328043878744 26.72238737229945 28.227579132473622 47 19.79973517836208 23.7280972617652 31.947773614134984 24.52439394573773 48 18.381159981577625 20.737601532406632 36.57103081560877 24.310207670406967 49 17.828750418690337 21.638832481996314 30.269217886451184 30.26319921286217 50 17.20071491374979 23.999330095461396 33.73152528889633 25.06842970189248 51 20.53244326745939 23.247780941215876 29.126847471110366 27.09292832021437 52 18.424075741081896 21.490066571763524 31.943325029308323 28.14253265784626 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 617.0 1 459.5 2 302.0 3 263.0 4 224.0 5 270.5 6 317.0 7 460.0 8 603.0 9 727.5 10 852.0 11 1134.0 12 1416.0 13 1302.0 14 1313.5 15 1439.0 16 1294.0 17 1149.0 18 1193.5 19 1238.0 20 1804.0 21 2370.0 22 2343.5 23 2317.0 24 2640.5 25 2964.0 26 3748.0 27 4532.0 28 5859.0 29 7186.0 30 9819.0 31 12452.0 32 14083.5 33 15715.0 34 17968.5 35 20222.0 36 22233.0 37 24244.0 38 27773.0 39 38626.5 40 45951.0 41 54684.0 42 63417.0 43 70265.0 44 77113.0 45 88459.5 46 99806.0 47 99172.5 48 98539.0 49 82508.0 50 66477.0 51 54251.0 52 42025.0 53 37110.0 54 32195.0 55 29063.5 56 25932.0 57 24277.0 58 22622.0 59 20553.5 60 18485.0 61 15954.0 62 13423.0 63 11538.5 64 7941.5 65 6229.0 66 4725.5 67 3222.0 68 2706.5 69 2191.0 70 1878.5 71 1566.0 72 1349.5 73 1133.0 74 942.5 75 752.0 76 643.5 77 535.0 78 372.0 79 209.0 80 136.5 81 64.0 82 65.5 83 67.0 84 39.5 85 12.0 86 11.0 87 10.0 88 6.0 89 3.0 90 4.0 91 3.5 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 764288.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.0681676317839 #Duplication Level Percentage of deduplicated Percentage of total 1 65.52308119299562 12.494050959390275 2 12.966596332400831 4.944984649597868 3 6.133731750941813 3.508770757060616 4 3.4016953433735932 2.594563881588255 5 2.173545646211429 2.0722766368646797 6 1.5155037478115176 1.7338727705920063 7 0.9836780453821038 1.3129856505536042 8 0.7331582465337173 1.1183987476423736 9 0.5381553842758541 0.923547337138716 >10 3.5770814794297037 13.959313110103388 >50 1.1870435194156057 16.774074950506325 >100 1.2502425956807883 33.13252463888177 >500 0.006182518330289613 0.8294166907698547 >1k 0.010304197217149355 4.601219219310279 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCTT 4749 0.6213626277005527 Illumina Single End Adapter 2 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 3599 0.47089578797521353 No Hit GCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 3565 0.4664472031485513 No Hit TTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 3333 0.4360921537430916 No Hit GCCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 3237 0.4235314436442807 No Hit GTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 3163 0.41384922960978054 No Hit GGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 2390 0.3127093451683135 No Hit ATCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 2378 0.3111392564059622 No Hit ACCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 1486 0.19442932507117736 No Hit TCCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 1460 0.19102746608608273 No Hit AGCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 1351 0.1767658264947245 No Hit CCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 1266 0.165644364428069 No Hit CTCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 1136 0.1486350695025959 No Hit TCTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGCT 1010 0.13214913749790655 No Hit AACTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTCTGC 1004 0.13136409311673086 No Hit AAAAACTGTCTCTTATACACATCTGACGCTAAGTCCTTCGTATGCCGTCTTC 916 0.11985010885948752 No Hit TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAAT 900 0.11775665717635238 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6538111287891476 0.0 2 0.0 0.0 0.0 1.5147431334784793 0.0 3 0.0 0.0 0.0 5.2409562887288565 0.0 4 0.0 0.0 0.0 6.0640753223915596 0.0 5 0.0 0.0 0.0 7.434893652654496 0.0 6 0.0 0.0 0.0 11.344807193099983 0.0 7 0.0 0.0 0.0 11.85953462569084 0.0 8 0.0 0.0 0.0 12.860858733880422 0.0 9 0.0 0.0 0.0 13.488240035169989 0.0 10 0.0 0.0 0.0 15.525168522860492 0.0 11 0.0 0.0 0.0 17.213537305308993 0.0 12 0.0 0.0 0.0 17.95972198961648 0.0 13 0.0 0.0 0.0 18.325029308323565 0.0 14 0.0 0.0 0.0 18.513570800535923 0.0 15 0.0 0.0 0.0 18.844728688661867 0.0 16 0.0 0.0 0.0 19.59039001004857 0.0 17 0.0 0.0 0.0 20.691283913917268 0.0 18 0.0 0.0 0.0 22.00348559705242 0.0 19 0.0 0.0 0.0 22.693277926645454 0.0 20 0.0 0.0 0.0 23.443126151398427 0.0 21 3.925221905878412E-4 0.0 0.0 24.477160442136995 0.0 22 3.925221905878412E-4 0.0 0.0 25.3582419192765 0.0 23 3.925221905878412E-4 0.0 0.0 26.28315504103165 0.0 24 3.925221905878412E-4 0.0 0.0 26.92859236308826 0.0 25 6.542036509797354E-4 0.0 0.0 27.52156255233629 0.0 26 7.850443811756824E-4 0.0 0.0 28.063504856807906 0.0 27 7.850443811756824E-4 0.0 0.0 28.616568623346172 0.0 28 7.850443811756824E-4 0.0 0.0 29.10735220231117 0.0 29 7.850443811756824E-4 0.0 0.0 29.620771227600066 0.0 30 7.850443811756824E-4 0.0 0.0 30.226040445486518 0.0 31 7.850443811756824E-4 0.0 0.0 30.779889256405962 0.0 32 7.850443811756824E-4 0.0 0.0 31.34237355551834 0.0 33 7.850443811756824E-4 0.0 0.0 31.84754961480489 0.0 34 7.850443811756824E-4 0.0 0.0 32.32603416513147 0.0 35 7.850443811756824E-4 0.0 0.0 32.912462317869704 0.0 36 9.158851113716295E-4 0.0 0.0 33.45558218891308 0.0 37 9.158851113716295E-4 0.0 0.0 33.996870289733714 0.0 38 9.158851113716295E-4 0.0 0.0 34.51604630715123 0.0 39 0.0011775665717635238 0.0 0.0 35.0174279852621 0.0 40 0.0011775665717635238 0.0 0.0 35.53359466588511 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGCA 20 6.310121E-4 46.0 20 TCACGCA 30 1.8605788E-6 46.0 12 TCGCCTC 20 6.310121E-4 46.0 42 GTTGACG 60 0.0 46.0 1 ACAACCG 25 3.4160734E-5 46.0 30 TAGAGTA 20 6.310121E-4 46.0 14 CTATGCG 30 1.8605788E-6 46.0 1 TCGTTAG 60 0.0 46.0 1 GGTACGC 25 3.4160734E-5 46.0 32 GTACCGA 20 6.310121E-4 46.0 23 ATCTCCG 30 1.8605788E-6 46.0 44 GTCGCAT 45 3.092282E-10 46.0 15 GTCGCAA 30 1.8605788E-6 46.0 27 CAAACGA 20 6.310121E-4 46.0 29 ACACGGA 25 3.4160734E-5 46.0 19 ACACGAC 100 0.0 46.0 26 ACGCCGT 20 6.310121E-4 46.0 34 ACGCCAT 20 6.310121E-4 46.0 31 GTCGATT 40 5.6079443E-9 46.0 10 CGTATGT 25 3.4160734E-5 46.0 10 >>END_MODULE