##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545681_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2134575 Sequences flagged as poor quality 0 Sequence length 52 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.53179204291252 33.0 31.0 34.0 31.0 34.0 2 32.94793577175784 34.0 31.0 34.0 31.0 34.0 3 33.036001545975196 34.0 33.0 34.0 31.0 34.0 4 36.423425740486984 37.0 37.0 37.0 35.0 37.0 5 36.388092243186584 37.0 37.0 37.0 35.0 37.0 6 36.38716840588876 37.0 37.0 37.0 35.0 37.0 7 36.45386318119532 37.0 37.0 37.0 35.0 37.0 8 36.49697574458616 37.0 37.0 37.0 35.0 37.0 9 38.315419228652075 39.0 39.0 39.0 37.0 39.0 10 38.08679807455817 39.0 39.0 39.0 35.0 39.0 11 37.92126723118185 39.0 38.0 39.0 35.0 39.0 12 37.529723715493716 39.0 37.0 39.0 35.0 39.0 13 37.427395148917235 39.0 37.0 39.0 35.0 39.0 14 38.50746167269831 41.0 38.0 41.0 34.0 41.0 15 38.646115971563425 41.0 38.0 41.0 34.0 41.0 16 38.773548364428514 41.0 38.0 41.0 35.0 41.0 17 38.75182694447373 40.0 38.0 41.0 35.0 41.0 18 38.724634177763726 40.0 38.0 41.0 35.0 41.0 19 38.70363140203553 40.0 38.0 41.0 35.0 41.0 20 38.57182108850708 40.0 38.0 41.0 34.0 41.0 21 38.56027218532963 40.0 38.0 41.0 34.0 41.0 22 38.728902006254174 40.0 38.0 41.0 35.0 41.0 23 38.75218767201902 40.0 38.0 41.0 35.0 41.0 24 38.70417389878547 40.0 38.0 41.0 35.0 41.0 25 38.63132520525163 40.0 37.0 41.0 35.0 41.0 26 38.50885492428235 40.0 37.0 41.0 35.0 41.0 27 38.43697035709685 40.0 37.0 41.0 35.0 41.0 28 38.37778152559643 40.0 37.0 41.0 35.0 41.0 29 38.304878020214794 40.0 36.0 41.0 34.0 41.0 30 38.226215991473715 40.0 36.0 41.0 34.0 41.0 31 38.152434091095415 40.0 36.0 41.0 34.0 41.0 32 38.11456425752199 40.0 36.0 41.0 34.0 41.0 33 38.03320286239649 40.0 36.0 41.0 34.0 41.0 34 37.89243432533408 40.0 35.0 41.0 34.0 41.0 35 37.794806460302404 40.0 35.0 41.0 33.0 41.0 36 37.73051450522938 40.0 35.0 41.0 33.0 41.0 37 37.64221214995959 40.0 35.0 41.0 33.0 41.0 38 37.53871848025954 40.0 35.0 41.0 33.0 41.0 39 37.440616516168326 40.0 35.0 41.0 33.0 41.0 40 37.31334902732394 39.0 35.0 41.0 33.0 41.0 41 37.16578241570336 39.0 35.0 41.0 33.0 41.0 42 37.0883159411124 39.0 35.0 41.0 33.0 41.0 43 37.01563636789525 39.0 35.0 41.0 33.0 41.0 44 36.91777192181113 39.0 35.0 41.0 32.0 41.0 45 36.86950845015987 39.0 35.0 41.0 32.0 41.0 46 36.85326821498425 39.0 35.0 41.0 33.0 41.0 47 36.803270908728905 38.0 35.0 41.0 33.0 41.0 48 36.69462351990443 38.0 35.0 41.0 32.0 41.0 49 36.60408699624047 38.0 35.0 40.0 32.0 41.0 50 36.507468231380955 38.0 35.0 40.0 32.0 41.0 51 36.401811133363786 38.0 35.0 40.0 32.0 41.0 52 36.07448040007964 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 4.0 10 5.0 11 5.0 12 14.0 13 22.0 14 39.0 15 76.0 16 124.0 17 191.0 18 409.0 19 690.0 20 1263.0 21 1878.0 22 2658.0 23 3692.0 24 4752.0 25 6532.0 26 8600.0 27 10850.0 28 13330.0 29 17224.0 30 22031.0 31 29007.0 32 38033.0 33 56088.0 34 138305.0 35 197078.0 36 127569.0 37 197674.0 38 334307.0 39 920967.0 40 1154.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.60486279470152 13.453076139278311 45.07248515512456 11.869575910895612 2 25.99435484815478 12.876567935069042 48.651558272724074 12.477518944052095 3 26.719932539264256 13.991684527364932 44.46243397397608 14.825948959394728 4 24.646779803942238 14.171158193082933 46.04790180715131 15.134160195823524 5 24.348406591476053 16.209315671737933 44.15848588126442 15.283791855521592 6 26.226110584074114 19.07283651312322 42.928592342738014 11.77246056006465 7 86.43940831313024 2.8902708970169706 6.742653689844583 3.927667100008198 8 87.37748732183222 2.799479990161976 6.809411709590902 3.013620978414907 9 80.58358221191571 4.665565744937517 8.521368422285466 6.229483620861295 10 45.91237131513299 20.28708290877575 15.357389644308586 18.443156131782672 11 35.51311150931684 22.650738437393862 23.344600213157186 18.49154984013211 12 30.600939297049763 21.79023927479709 26.933792441118253 20.675028987034892 13 26.634388578522657 21.961139805347667 32.51335745991591 18.891114156213767 14 20.254992211564364 27.054097419861094 33.31220500568029 19.37870536289425 15 20.215686963447055 21.566541348980476 37.23509363690665 20.98267805066582 16 26.534415515969222 21.08311959055081 31.20269842942975 21.17976646405022 17 26.603703313305928 21.363315882552733 27.253621915369568 24.779358888771768 18 26.656922338170364 21.19264959066793 29.472611644004076 22.677816427157634 19 27.820666877481464 24.28361617652226 26.595692350936368 21.30002459505991 20 26.214586041717908 25.09895412435731 25.46118079711418 23.225279036810605 21 26.902966632702057 23.91305060726374 28.86808849536793 20.31589426466627 22 28.448754435894735 20.59871402972489 27.580853331459426 23.371678202920958 23 27.79794572690114 22.629094784676106 25.674572221636627 23.898387266786127 24 27.222327629621823 21.71101975803146 26.83105536230866 24.23559725003806 25 31.053019921998526 22.010236229694435 23.295831722942506 23.640912125364533 26 23.604089807104458 24.969654380848645 24.317627630793016 27.10862818125388 27 22.934588852581896 23.408032043849477 27.402597706803462 26.254781396765164 28 23.56478455898715 24.364943841279878 26.708735931040138 25.36153566869283 29 24.376140449504 24.562547579728985 26.839019476945058 24.222292493821957 30 26.36337444221918 25.70239977513088 25.778293102842486 22.155932679807457 31 25.697902392747974 27.022568895447574 24.852347657027746 22.427181054776714 32 29.033273602473557 23.49544991391729 23.816263190564865 23.655013293044284 33 29.50268788868979 24.645702306079663 23.571343241628895 22.280266563601653 34 24.4295000175679 25.813522598175282 26.906386517222398 22.85059086703442 35 23.78286075682513 26.784582411018587 26.708970169705914 22.72358666245037 36 26.291931649157323 27.490109272337587 23.673002822575924 22.544956255929165 37 27.751425927877914 26.58430835177963 23.83242565850345 21.83184006183901 38 26.43280278275535 24.457280723329 26.82299755220594 22.286918941709708 39 23.910192895541265 25.778199407376174 23.317897005258658 26.993710691823896 40 27.127273579049692 22.760877458042 27.010341637094037 23.10150732581427 41 24.275979996017945 23.711839593361674 25.903657636766102 26.108522773854283 42 22.889146551421245 24.847990817844302 26.589321059227245 25.673541571507208 43 22.52654509679913 22.26691495965239 28.259114812082032 26.947425131466453 44 26.98598081585327 22.5725964184908 25.322933136572857 25.118489629083072 45 22.347165126547438 23.237412599697834 26.341824484967734 28.073597788786998 46 22.206762470280967 24.300762446857103 25.787381563074618 27.70509351978731 47 22.86127215019383 24.30582200203788 28.98450511225888 23.84840073550941 48 22.671913612780063 24.797301570570255 29.086914256936392 23.443870559713293 49 23.896934987058312 22.916037150252393 26.283780143588302 26.903247719100992 50 21.813709989107902 24.02356440977712 28.04577023529274 26.116955365822236 51 23.86760830610309 24.545963482192004 26.230514270990714 25.355913940714192 52 22.143143248656056 23.909724418209713 27.168124802361127 26.779007530773104 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 159.0 1 123.0 2 87.0 3 89.5 4 92.0 5 110.0 6 128.0 7 240.0 8 352.0 9 438.5 10 525.0 11 709.5 12 894.0 13 906.5 14 1233.5 15 1548.0 16 1541.5 17 1535.0 18 1690.0 19 1845.0 20 2568.0 21 3291.0 22 4689.0 23 6087.0 24 7385.5 25 8684.0 26 10168.0 27 11652.0 28 14291.0 29 16930.0 30 19358.5 31 21787.0 32 25386.0 33 28985.0 34 35471.5 35 41958.0 36 46123.5 37 50289.0 38 56050.5 39 70684.0 40 79556.0 41 88164.5 42 96773.0 43 114601.5 44 132430.0 45 156097.5 46 179765.0 47 191460.5 48 203156.0 49 188506.5 50 173857.0 51 155443.5 52 137030.0 53 136360.5 54 135691.0 55 135311.5 56 134932.0 57 131121.0 58 127310.0 59 123449.5 60 119589.0 61 108279.5 62 96970.0 63 88700.0 64 68617.0 65 56804.0 66 49784.5 67 42765.0 68 34801.5 69 26838.0 70 23769.5 71 20701.0 72 16366.0 73 12031.0 74 9907.5 75 7784.0 76 6559.0 77 5334.0 78 3883.5 79 2433.0 80 1950.5 81 1468.0 82 1154.0 83 840.0 84 526.5 85 213.0 86 157.5 87 102.0 88 110.5 89 81.0 90 43.0 91 29.0 92 15.0 93 15.5 94 16.0 95 11.0 96 6.0 97 6.0 98 6.0 99 7.5 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2134575.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.817204591829498 #Duplication Level Percentage of deduplicated Percentage of total 1 69.83386770065617 12.442443082613448 2 11.682318143019465 4.162925049220389 3 4.574011416018127 2.4448829161367613 4 2.383454229221101 1.6986596654917456 5 1.4535664670942632 1.2949245566020642 6 0.9365900818889284 1.0012450264616026 7 0.7120577773394886 0.888081537004273 8 0.5252646942255876 0.7486998817505645 9 0.43168254680744694 0.6922238629671266 >10 4.254117873750764 17.811107505852945 >50 2.057533893458231 26.901914284771884 >100 1.1455168474929147 26.70311169379549 >500 0.005536444988889255 0.6739262294078611 >1k 0.0036909633259261695 1.801896574899669 >5k 7.90920712698465E-4 0.7339581330241743 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 5309 0.24871461532155115 No Hit GCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCT 5219 0.24449831933757304 No Hit CTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGCTT 5097 0.238782895892625 Illumina Single End Adapter 1 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 4686 0.21952847756579177 No Hit GGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 3939 0.18453322089877375 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGGC 3846 0.18017638171532976 No Hit ATCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 3755 0.17591323799819636 No Hit TTCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 3461 0.16214000445053464 No Hit TGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 3159 0.14799198903763044 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCTGTCTCTTATACACATCTGACG 2994 0.14026211306700395 No Hit AGCTGTCTCTTATACACATCTGACGCAATGACAGTCGTATGCCGTCTTCTGC 2834 0.13276647576215406 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2516191747771805 0.0 2 0.0 0.0 0.0 0.6319290725320028 0.0 3 0.0 0.0 0.0 2.3629528126207795 0.0 4 0.0 0.0 0.0 2.7453708583675906 0.0 5 0.0 0.0 0.0 3.424194511788061 0.0 6 0.0 0.0 0.0 5.512713303585023 0.0 7 0.0 0.0 0.0 5.832777016502114 0.0 8 0.0 0.0 0.0 6.329878313013129 0.0 9 0.0 0.0 0.0 6.676457842896127 0.0 10 0.0 0.0 0.0 7.889767283885551 0.0 11 0.0 0.0 0.0 8.867947952168464 0.0 12 0.0 0.0 0.0 9.252708384573042 0.0 13 0.0 0.0 0.0 9.450780600353701 0.0 14 4.684773315531195E-5 0.0 0.0 9.59427520700842 0.0 15 4.684773315531195E-5 0.0 0.0 9.777918320977244 0.0 16 4.684773315531195E-5 0.0 0.0 10.175233945867443 0.0 17 4.684773315531195E-5 0.0 0.0 10.696977150018153 0.0 18 4.684773315531195E-5 0.0 0.0 11.241394657016034 0.0 19 4.684773315531195E-5 0.0 0.0 11.617909888385276 0.0 20 4.684773315531195E-5 0.0 0.0 12.080859187426068 0.0 21 4.684773315531195E-5 0.0 0.0 12.74426993663844 0.0 22 4.684773315531195E-5 0.0 0.0 13.325322370963775 0.0 23 4.684773315531195E-5 0.0 0.0 13.880233770188445 0.0 24 1.873909326212478E-4 0.0 0.0 14.347680451612147 0.0 25 1.873909326212478E-4 0.0 0.0 14.759190939648407 0.0 26 1.873909326212478E-4 0.0 0.0 15.128725858777509 0.0 27 1.873909326212478E-4 0.0 0.0 15.531241582047949 0.0 28 1.873909326212478E-4 0.0 0.0 15.89927737371608 0.0 29 1.873909326212478E-4 0.0 0.0 16.332712600869026 0.0 30 1.873909326212478E-4 0.0 0.0 16.86986870922783 0.0 31 1.873909326212478E-4 0.0 0.0 17.30100839745617 0.0 32 1.873909326212478E-4 0.0 0.0 17.78663199934413 0.0 33 1.873909326212478E-4 0.0 0.0 18.23196655071853 0.0 34 1.873909326212478E-4 0.0 0.0 18.742044669313564 0.0 35 1.873909326212478E-4 0.0 0.0 19.281168382464895 0.0 36 1.873909326212478E-4 0.0 0.0 19.700924071536488 0.0 37 1.873909326212478E-4 0.0 0.0 20.155440778609325 0.0 38 1.873909326212478E-4 0.0 0.0 20.71189815302812 0.0 39 1.873909326212478E-4 0.0 0.0 21.792675356921166 0.0 40 1.873909326212478E-4 0.0 0.0 22.274832226555638 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAA 20 6.3126767E-4 46.0 45 AACATCG 25 3.418147E-5 46.0 24 CATACCG 20 6.3126767E-4 46.0 1 ACGTACG 20 6.3126767E-4 46.0 38 CAATACG 25 3.418147E-5 46.0 13 TCGGTAA 20 6.3126767E-4 46.0 16 TTACGCG 80 0.0 40.25 1 TCAAGCG 155 0.0 40.064514 17 TTTACGG 355 0.0 39.521126 2 CTTAACG 35 5.375279E-6 39.42857 1 GTAACGT 35 5.375279E-6 39.42857 28 TACGGGT 165 0.0 39.030304 4 AACGGGC 165 0.0 39.030304 4 TAGGGCG 1060 0.0 38.839622 5 CAAACGT 30 1.0018537E-4 38.333332 42 CGCCTAC 30 1.0018537E-4 38.333332 17 CGTAGCG 30 1.0018537E-4 38.333332 1 CGGCTAT 60 1.2369128E-10 38.333332 40 CCAACCG 30 1.0018537E-4 38.333332 10 GTTTACG 115 0.0 38.0 1 >>END_MODULE