SRR1545678_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1545678_1.fastq.gz
File type	Conventional base calls
Encoding	Illumina 1.5
Total Sequences	757430
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	4520	0.5967548156265265	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	2502	0.33032755502158617	No Hit
ATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTG	2137	0.2821382834057273	No Hit
ATGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCT	1768	0.23342091018311922	No Hit
CTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGCT	1717	0.22668761469706772	No Hit
ATGCCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	1501	0.19817012793261424	No Hit
CCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCTGC	1372	0.1811388511149545	No Hit
ATGTCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	1325	0.17493365723565213	No Hit
ATTGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	1276	0.16846441255297517	No Hit
ATATCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	1087	0.14351161163407838	No Hit
ATCCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTCT	1067	0.1408711036003327	No Hit
ATGGCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	994	0.13123324927716093	No Hit
ATATTTATGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT	932	0.12304767437254928	No Hit
ATTTCTGTCTCTTATACACATCTGACGCTTGGTACATCGTATGCCGTCTTC	900	0.11882286151855617	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGCCGTC	65	0.0	45.000004	28
AGGTAAC	45	3.8380676E-10	45.000004	33
AACCGAG	45	3.8380676E-10	45.000004	3
CCTTACG	45	3.8380676E-10	45.000004	31
GACACGG	65	0.0	45.000004	16
TGAACGT	45	3.8380676E-10	45.000004	45
CACGAAT	45	3.8380676E-10	45.000004	11
AGGCACC	45	3.8380676E-10	45.000004	26
TATTCGA	65	0.0	45.000004	28
GTCGTTC	65	0.0	45.000004	29
GAGCCGT	65	0.0	45.000004	27
CGAGCCG	65	0.0	45.000004	26
ATGCGTC	65	0.0	45.000004	1
GCGTGTT	65	0.0	45.000004	10
GAACCTC	45	3.8380676E-10	45.000004	12
ATTGCTA	155	0.0	45.000004	1
TCCTTAC	45	3.8380676E-10	45.000004	30
GTGCGTT	45	3.8380676E-10	45.000004	3
TGCGTTA	125	0.0	45.000004	2
CGAAGTA	45	3.8380676E-10	45.000004	25