##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545675_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2094663 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.617495033807344 33.0 31.0 34.0 31.0 34.0 2 33.022347270181406 34.0 33.0 34.0 31.0 34.0 3 33.08947740042193 34.0 33.0 34.0 31.0 34.0 4 36.44667996713552 37.0 37.0 37.0 35.0 37.0 5 36.41957011700689 37.0 37.0 37.0 35.0 37.0 6 36.435332557074815 37.0 37.0 37.0 35.0 37.0 7 36.51792865964597 37.0 37.0 37.0 35.0 37.0 8 36.55974970675474 37.0 37.0 37.0 35.0 37.0 9 38.38602104491272 39.0 39.0 39.0 37.0 39.0 10 38.13735670129276 39.0 39.0 39.0 37.0 39.0 11 37.97654133385657 39.0 38.0 39.0 35.0 39.0 12 37.62331458568753 39.0 37.0 39.0 35.0 39.0 13 37.553195430482134 39.0 37.0 39.0 35.0 39.0 14 38.94533249501232 41.0 38.0 41.0 35.0 41.0 15 38.975999480584704 41.0 38.0 41.0 35.0 41.0 16 39.04108489050506 41.0 38.0 41.0 35.0 41.0 17 38.974118509755506 41.0 38.0 41.0 35.0 41.0 18 38.947651245092885 41.0 38.0 41.0 35.0 41.0 19 38.94367065251069 41.0 38.0 41.0 35.0 41.0 20 38.858940555115545 41.0 38.0 41.0 35.0 41.0 21 38.8174985665952 41.0 38.0 41.0 35.0 41.0 22 38.90258767162069 41.0 38.0 41.0 35.0 41.0 23 38.905873164322855 41.0 38.0 41.0 35.0 41.0 24 38.88721383821646 41.0 38.0 41.0 35.0 41.0 25 38.81679678306248 41.0 38.0 41.0 35.0 41.0 26 38.69995077967196 40.0 38.0 41.0 35.0 41.0 27 38.605707457476456 40.0 37.0 41.0 35.0 41.0 28 38.57993577009763 40.0 37.0 41.0 35.0 41.0 29 38.518725446527675 40.0 37.0 41.0 35.0 41.0 30 38.485184490297485 40.0 37.0 41.0 35.0 41.0 31 38.425126142009475 40.0 36.0 41.0 35.0 41.0 32 38.36099028817523 40.0 36.0 41.0 35.0 41.0 33 38.31837006716594 40.0 36.0 41.0 35.0 41.0 34 38.2152269840065 40.0 36.0 41.0 34.0 41.0 35 38.0755696739762 40.0 36.0 41.0 34.0 41.0 36 38.01869942802255 40.0 35.0 41.0 34.0 41.0 37 37.94923288376221 40.0 35.0 41.0 34.0 41.0 38 37.81402975084775 40.0 35.0 41.0 34.0 41.0 39 37.80879024454053 40.0 35.0 41.0 34.0 41.0 40 37.659227761219825 40.0 35.0 41.0 34.0 41.0 41 37.538188720572236 40.0 35.0 41.0 33.0 41.0 42 37.465985697938045 39.0 35.0 41.0 33.0 41.0 43 37.384593607659085 39.0 35.0 41.0 33.0 41.0 44 37.259142401426864 39.0 35.0 41.0 33.0 41.0 45 37.22756739389582 39.0 35.0 41.0 33.0 41.0 46 37.2353008574649 39.0 35.0 41.0 33.0 41.0 47 37.20906035959006 39.0 35.0 41.0 33.0 41.0 48 37.115598069952064 39.0 35.0 41.0 33.0 41.0 49 37.04136082988051 39.0 35.0 41.0 33.0 41.0 50 36.949012800627116 39.0 35.0 41.0 33.0 41.0 51 36.841108569731745 38.0 35.0 40.0 33.0 41.0 52 36.51753862077098 38.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 3.0 12 5.0 13 14.0 14 24.0 15 31.0 16 63.0 17 115.0 18 215.0 19 432.0 20 788.0 21 1429.0 22 1913.0 23 2662.0 24 3647.0 25 5080.0 26 6483.0 27 8428.0 28 10687.0 29 13996.0 30 17946.0 31 23610.0 32 31592.0 33 44417.0 34 101441.0 35 229761.0 36 120389.0 37 171177.0 38 299966.0 39 996166.0 40 2179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.12813469278829 13.467703396680038 47.13942051776348 12.264741392768192 2 25.32512389821179 13.04286178731376 49.23202443543425 12.39998987904021 3 25.400076289121447 13.765364643381774 45.64118428596867 15.193374781528101 4 23.49184570501317 13.78207377511323 47.51203415537487 15.21404636449873 5 23.127013748750993 16.89469857442462 44.90884691236729 15.069440764457099 6 24.63742377652157 19.226815960371667 44.10771565640869 12.028044606698069 7 86.38797744553659 2.7696579354292314 6.376538851356996 4.465825767677187 8 87.57098397212344 2.8306701364372215 6.521621855162382 3.0767240362769575 9 79.90798519857371 4.837914261148453 8.731141954576941 6.5229585857008985 10 42.63793268893373 25.083318891869478 13.565953091260981 18.712795327935805 11 33.24630262720065 22.249211448333217 26.06634098181903 18.4381449426471 12 29.277692879475126 23.532711467190666 26.63483338369943 20.554762269634782 13 21.994564280745877 26.06194886719248 32.29927678103829 19.64421007102336 14 16.924488569282982 33.523769694695524 30.08421879796416 19.46752293805734 15 17.39038690233226 23.89529962576319 38.39825308414767 20.316060387756885 16 20.466585794469086 22.14408713955419 34.951970794347346 22.437356271629376 17 19.939054635518936 22.035907446687126 28.402898222769007 29.62213969502493 18 21.587864014402317 23.194279939064185 30.62373279138458 24.59412325514892 19 24.81248773669082 25.63400413336179 27.41839618115181 22.135111948795583 20 27.723361705439014 21.68988519871693 26.834722339583983 23.752030756260076 21 25.132682441041826 25.62918235534785 27.640532152427383 21.597603051182933 22 27.97404642178718 20.815711166903696 25.45836728867603 25.751875122633095 23 25.85685621028299 24.88180676318816 22.99682574237479 26.264511284154064 24 25.95715874104808 20.438753155042125 29.605764745928102 23.99832335798169 25 26.955171309179565 23.05277746348697 25.39692542428066 24.595125803052806 26 22.11310363528644 27.223854147421328 25.40208138492922 25.26096083236301 27 22.0602072982623 24.93938165709711 27.76799895735018 25.232412087290413 28 24.859321045915262 24.40416429755049 29.281941772972548 21.4545728835617 29 21.836066231178954 22.77010669496716 30.28463289798884 25.109194175865046 30 22.780657318146165 25.476508631698753 28.201195132582185 23.5416389175729 31 25.40637801880302 28.129823269900694 23.852046844766914 22.611751866529364 32 24.915320507403816 26.414702508231635 26.151223371014815 22.518753613349737 33 25.441849118450083 27.095146092712763 22.70675521551677 24.756249573320385 34 23.07077558538056 26.82006604403668 26.530043257555036 23.57911511302773 35 22.582391535058385 25.86611784329985 27.71214271699075 23.839347904651014 36 25.964224316751665 26.82082989005869 24.48040567862229 22.734540114567356 37 26.498152686136144 26.098661216625302 25.46290262443171 21.940283472806843 38 21.35088078607394 26.78512008852975 27.932416813587675 23.93158231180863 39 23.486069119471725 27.778310878647304 24.364444304406007 24.371175697474964 40 25.480900746325304 24.6915136229551 27.406174644799663 22.42141098591993 41 21.98730774353679 24.61637027053994 28.199285517527162 25.19703646839611 42 22.692337621851344 25.431728158658455 25.22596713647971 26.64996708301049 43 23.22588406822482 21.4422558664568 28.583595547350576 26.748264517967808 44 25.101412494515824 23.216192771820573 25.951859559270396 25.73053517439321 45 20.508072181539465 25.35343394140251 27.59498783336508 26.54350604369295 46 21.684967939950244 26.450746492395194 25.51641958634874 26.347865981305823 47 22.88277398321353 24.455580682906987 29.828043938332797 22.833601395546683 48 22.273177117273757 21.736718507941372 31.8677992593558 24.122305115429068 49 21.630925833893087 22.76265919625257 27.128325654293796 28.478089315560545 50 20.515997084017812 24.332171809976117 30.664503072809325 24.487328033196746 51 21.725356298363984 25.674535712904657 27.039528554235215 25.560579434496145 52 22.102027867967305 22.719072232621667 28.80415608620575 26.374743813205274 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 388.0 1 295.5 2 203.0 3 193.5 4 184.0 5 251.5 6 319.0 7 431.5 8 544.0 9 918.0 10 1292.0 11 1243.5 12 1195.0 13 1491.5 14 1746.5 15 1705.0 16 2137.5 17 2570.0 18 2243.5 19 1917.0 20 2442.5 21 2968.0 22 4212.0 23 5456.0 24 6305.0 25 7154.0 26 10589.5 27 14025.0 28 16984.0 29 19943.0 30 20552.5 31 21162.0 32 26393.0 33 31624.0 34 37300.5 35 42977.0 36 48103.5 37 53230.0 38 60575.0 39 84278.5 40 100637.0 41 117912.5 42 135188.0 43 151359.0 44 167530.0 45 188020.0 46 208510.0 47 216940.5 48 225371.0 49 199193.0 50 173015.0 51 150289.0 52 127563.0 53 117236.5 54 106910.0 55 102454.0 56 97998.0 57 100012.5 58 102027.0 59 103826.5 60 105626.0 61 91663.0 62 77700.0 63 67584.0 64 52161.5 65 46855.0 66 37235.5 67 27616.0 68 23413.0 69 19210.0 70 16797.5 71 14385.0 72 12253.5 73 10122.0 74 8215.0 75 6308.0 76 4492.0 77 2676.0 78 2406.5 79 2137.0 80 1380.0 81 623.0 82 414.5 83 206.0 84 267.5 85 329.0 86 187.0 87 45.0 88 31.5 89 14.0 90 10.0 91 9.0 92 8.0 93 5.5 94 3.0 95 2.5 96 2.0 97 1.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 2094663.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.84259423290439 #Duplication Level Percentage of deduplicated Percentage of total 1 65.1324528464542 9.016021161472441 2 12.48027864649252 3.455188664339544 3 5.829089607525074 2.4206916655262853 4 3.498579529821957 1.937176672914831 5 2.2427631398559225 1.5522830052770065 6 1.5574279817141667 1.2935306158704272 7 1.1236424756650865 1.0887888797441556 8 0.8272855482605951 0.9161422527453807 9 0.6614629052951695 0.8240726338307186 >10 3.862270610901201 10.31382249089745 >50 0.7880973008884669 8.004221337360722 >100 1.9738660632685343 54.361386754077856 >500 0.016224502443756905 1.4220797254979676 >1k 0.004487628335507228 1.4079353841422084 >5k 0.001726010898272011 1.4824798858820212 >10k+ 3.4520217965440216E-4 0.5041788704210033 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGCTT 10551 0.5037087111387369 Illumina Single End Adapter 1 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGCT 6806 0.3249210016121925 No Hit GCCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 6472 0.308975715902749 No Hit GTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 6175 0.294796824119202 No Hit TGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 6098 0.2911208151382824 No Hit TTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 5473 0.2612830799035453 No Hit ATCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 4413 0.2106782809454313 No Hit GGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 3842 0.18341852603497555 No Hit AGCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 3227 0.1540581945639943 No Hit CCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGCT 2831 0.1351530055192649 No Hit ACCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 2588 0.12355209405999915 No Hit TCCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 2276 0.1086570966308184 No Hit CTCTGTCTCTTATACACATCTGACGCTGTCAAAGTCGTATGCCGTCTTCTGC 2095 0.10001608850683857 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5210862081394477 0.0 2 0.0 0.0 0.0 1.1113004812707343 0.0 3 0.0 0.0 0.0 3.4536343077621554 0.0 4 0.0 0.0 0.0 3.980974505206804 0.0 5 0.0 0.0 0.0 4.840587722225484 0.0 6 0.0 0.0 0.0 7.441817609801672 0.0 7 0.0 0.0 0.0 7.762871640927442 0.0 8 0.0 0.0 0.0 8.377003842622894 0.0 9 0.0 0.0 0.0 8.791056126928293 0.0 10 0.0 0.0 0.0 10.187271174408485 0.0 11 0.0 0.0 0.0 11.396678129131034 0.0 12 0.0 0.0 0.0 11.927646595180228 0.0 13 0.0 0.0 0.0 12.170549630179174 0.0 14 0.0 0.0 0.0 12.311479221239884 0.0 15 0.0 0.0 0.0 12.545263844351096 0.0 16 0.0 0.0 0.0 13.05732712135556 0.0 17 0.0 0.0 0.0 13.788805168182185 0.0 18 0.0 0.0 0.0 14.602014739363803 0.0 19 0.0 0.0 0.0 15.083380954358768 0.0 20 0.0010980286566383232 0.0 0.0 15.612821728363942 0.0 21 0.0011935094093894817 0.0 0.0 16.426795145567567 0.0 22 0.004821778013933506 0.0 0.0 17.09430108805092 0.0 23 0.004821778013933506 0.0 0.0 17.819047741808586 0.0 24 0.00587206629419625 0.0 0.0 18.354933466624463 0.0 25 0.00587206629419625 0.0 0.0 18.84871217947708 0.0 26 0.00587206629419625 0.0 0.0 19.286252728959266 0.0 27 0.00587206629419625 0.0 0.0 19.711094338325545 0.0 28 0.00587206629419625 0.0 0.0 20.117699123916353 0.0 29 0.00587206629419625 0.0 0.0 20.56707928673968 0.0 30 0.00587206629419625 0.0 0.0 21.04897064587478 0.0 31 0.00587206629419625 0.0 0.0 21.511765854459643 0.0 32 0.00587206629419625 0.0 0.0 21.97766418750892 0.0 33 0.00587206629419625 0.0 0.0 22.41687565016425 0.0 34 0.00587206629419625 0.0 0.0 22.850024085019882 0.0 35 0.00587206629419625 0.0 0.0 23.343277653732365 0.0 36 0.00587206629419625 0.0 0.0 23.787883778918136 0.0 37 0.00587206629419625 0.0 0.0 24.259463216756107 0.0 38 0.00587206629419625 0.0 0.0 24.73190198136884 0.0 39 0.00587206629419625 0.0 0.0 25.181234403815793 0.0 40 0.00587206629419625 0.0 0.0 25.65491441821429 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGTA 40 5.6152203E-9 46.000004 36 CGGAACC 40 5.6152203E-9 46.000004 37 AACCGAT 40 5.6152203E-9 46.000004 23 TCGCAAA 20 6.3126476E-4 46.000004 20 GCGAATC 35 1.02010745E-7 46.000004 18 CCCTATA 20 6.3126476E-4 46.000004 42 CTATCGT 20 6.3126476E-4 46.000004 22 GCAACGC 40 5.6152203E-9 46.000004 25 TAACGGA 40 5.6152203E-9 46.000004 29 CGACACG 40 5.6152203E-9 46.000004 1 TCGATAG 40 5.6152203E-9 46.000004 35 CCGTCGA 40 5.6152203E-9 46.000004 43 CCCGTTA 20 6.3126476E-4 46.000004 37 AATGCGT 40 5.6152203E-9 46.000004 41 TACGCTT 35 1.02010745E-7 46.000004 27 CTAACGG 35 1.02010745E-7 46.000004 2 CTAACGA 40 5.6152203E-9 46.000004 21 CGGATTA 35 1.02010745E-7 46.000004 26 CTCGGTT 40 5.6152203E-9 46.000004 21 TCTAACG 20 6.3126476E-4 46.000004 39 >>END_MODULE