##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545674_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1403948 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.874411302982733 31.0 31.0 34.0 31.0 34.0 2 32.54417542530065 34.0 31.0 34.0 31.0 34.0 3 32.51650987073595 34.0 31.0 34.0 31.0 34.0 4 35.99346556994988 37.0 35.0 37.0 35.0 37.0 5 35.769827657434604 37.0 35.0 37.0 35.0 37.0 6 35.76426691017046 37.0 35.0 37.0 35.0 37.0 7 35.764130152968626 37.0 35.0 37.0 35.0 37.0 8 35.724735531515414 37.0 35.0 37.0 33.0 37.0 9 37.888241587295255 39.0 38.0 39.0 35.0 39.0 10 37.82108382931562 39.0 38.0 39.0 35.0 39.0 11 37.643719710416626 39.0 37.0 39.0 35.0 39.0 12 37.19129910794417 39.0 37.0 39.0 33.0 39.0 13 36.95972785316835 39.0 37.0 39.0 33.0 39.0 14 37.64797414149242 40.0 35.0 41.0 33.0 41.0 15 37.555381680802995 40.0 35.0 41.0 33.0 41.0 16 37.5812850618399 40.0 35.0 41.0 33.0 41.0 17 37.647503326334025 40.0 35.0 41.0 33.0 41.0 18 37.708081780806694 40.0 35.0 41.0 33.0 41.0 19 37.66001376119343 40.0 35.0 41.0 33.0 41.0 20 37.610429303649425 40.0 35.0 41.0 33.0 41.0 21 37.59348351933262 40.0 35.0 41.0 33.0 41.0 22 37.52527016670133 39.0 35.0 41.0 33.0 41.0 23 37.44398510486143 39.0 35.0 41.0 32.0 41.0 24 37.39827757153399 39.0 35.0 41.0 32.0 41.0 25 37.31883730736466 39.0 35.0 41.0 32.0 41.0 26 37.20947855618584 39.0 35.0 41.0 32.0 41.0 27 37.11672939453598 39.0 35.0 41.0 32.0 41.0 28 37.04436774011573 39.0 35.0 41.0 31.0 41.0 29 36.94529427015815 39.0 35.0 41.0 31.0 41.0 30 36.86274705330967 39.0 35.0 41.0 31.0 41.0 31 36.80857268217911 39.0 35.0 41.0 31.0 41.0 32 36.69710701535954 39.0 35.0 41.0 31.0 41.0 33 36.6064775903381 39.0 35.0 41.0 31.0 41.0 34 36.527274514440705 39.0 35.0 41.0 30.0 41.0 35 36.42959639530809 39.0 35.0 41.0 30.0 41.0 36 36.303170060429586 38.0 35.0 41.0 30.0 41.0 37 36.19794322866659 38.0 35.0 41.0 30.0 41.0 38 36.11612182217575 38.0 35.0 41.0 30.0 41.0 39 36.05302404362555 38.0 35.0 40.0 30.0 41.0 40 35.97863239949058 38.0 35.0 40.0 30.0 41.0 41 35.94178773002989 38.0 35.0 40.0 29.0 41.0 42 35.805477125933436 38.0 35.0 40.0 29.0 41.0 43 35.690680851427544 38.0 35.0 40.0 29.0 41.0 44 35.61842959995669 37.0 34.0 40.0 29.0 41.0 45 35.54576309094069 37.0 34.0 40.0 29.0 41.0 46 35.45652403080456 37.0 34.0 40.0 28.0 41.0 47 35.37199882046914 37.0 34.0 40.0 28.0 41.0 48 35.273376221911356 37.0 34.0 40.0 28.0 41.0 49 35.23466752329858 36.0 34.0 40.0 28.0 41.0 50 35.095609666454884 36.0 34.0 40.0 28.0 41.0 51 34.91999703692729 36.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 8.0 10 17.0 11 15.0 12 9.0 13 22.0 14 32.0 15 40.0 16 85.0 17 200.0 18 421.0 19 719.0 20 1322.0 21 2189.0 22 3435.0 23 5030.0 24 7464.0 25 10301.0 26 13752.0 27 17004.0 28 19729.0 29 23567.0 30 28446.0 31 34707.0 32 43250.0 33 55974.0 34 90152.0 35 171697.0 36 103999.0 37 142918.0 38 213394.0 39 413834.0 40 211.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.0514292552145803 91.2517415174921 3.0305253470926274 3.6663038802006915 2 3.427904737212489 2.821472020331237 90.80656833443975 2.9440549080165366 3 28.749996438614534 16.422901702912075 41.68046109969885 13.146640758774542 4 27.149082444648947 15.443307017069008 44.206124443355456 13.201486094926592 5 24.550980520646064 14.06063472436301 46.61647012567417 14.771914629316754 6 23.221444099069195 15.134178758757447 46.86028257456829 14.784094567605068 7 22.99992592318234 17.65628071694963 44.35427807867528 14.98951528119275 8 25.644397085931956 19.904654588346578 42.66432944809922 11.78661887762225 9 81.6092903725779 4.6181197594212895 9.078114004222378 4.694475863778431 10 82.48866767145222 4.571109471290959 9.144142090732705 3.796080766524116 11 75.69354420534094 7.037725043947497 10.513281118673913 6.755449632037654 12 43.71422588300991 22.629541834882776 16.102946832788678 17.553285449318636 13 34.66353454686356 23.401935114405948 23.866553462094036 18.067976876636457 14 29.692980081883373 22.86516309720873 27.292321368027878 20.14953545288002 15 22.41543134076191 26.848002917486973 31.128717018009215 19.607848723741906 16 17.548798103633466 32.31294891263779 30.28680549422058 19.85144748950816 17 18.237000230777777 24.2418522623345 38.10796411263095 19.413183394256766 18 21.499941593278383 21.17948812918997 36.7636123275221 20.556957950009544 19 21.16146751874001 21.481636071991268 29.241894998960078 28.115001410308643 20 23.186684976936466 22.32760757520934 31.694265029758938 22.791442418095258 21 26.294136250060546 25.23419670814019 27.525022294273004 20.94664474752626 22 27.845262075233556 22.103738884915966 26.84508258140615 23.20591645844433 23 25.578155316293767 24.749278463304908 28.009513172852557 21.663053047548768 24 28.014570340212032 21.601298623595746 25.50151430109947 24.882616735092753 25 27.494821745534736 25.085402023436764 23.47159581408998 23.94818041693852 26 27.67246365249995 21.950599309945954 28.469359264018323 21.90757777353577 27 27.407354118528605 22.675554935083067 27.0886813471724 22.828409599215927 28 23.668967796528076 26.51045480316935 25.507853567226135 24.31272383307644 29 23.533421465752294 27.06425024288649 25.769544171151637 23.63278412020958 30 23.276431890639824 26.71081834939756 28.93725408633368 21.07549567362894 31 23.210902398094515 25.33477023365538 28.117209469296583 23.337117898953522 32 24.9240000341893 27.13298498234977 26.553333884160953 21.389681099299974 33 27.004775105630692 26.80540874733252 24.0267445802836 22.163071566753185 34 28.3892280910689 25.94205768304809 25.43406166040338 20.23465256547963 35 27.160621333553664 26.53716519415249 23.776949003809257 22.525264468484586 36 22.63801793228809 25.705795371338542 27.873468248111756 23.782718448261615 37 23.547667007609967 25.263115158111273 29.557789889654035 21.63142794462473 38 26.55283529019593 28.663882138084883 23.113035525532286 21.670247046186898 39 25.173154561280047 28.95121471735421 26.587451956910087 19.28817876445566 40 23.512266836093644 28.542652576876065 26.565513822449265 21.379566764581025 41 22.715086313738116 28.257314373466823 25.692831928248054 23.334767384547007 42 25.685922840447084 24.339362996350292 27.29531293181799 22.679401231384638 43 21.241598691689436 25.470102881303298 27.484921093943647 25.803377333063615 44 22.488439742782496 25.489120679683293 26.071051064569346 25.95138851296487 45 22.72014348109759 23.530216218834315 26.428685392906292 27.320954907161806 46 24.291284292580638 25.42387609797514 26.61622795146259 23.668611657981632 47 22.335727534068216 26.82093638795739 25.83058631801178 25.01274975996262 48 21.752799961252126 27.891061492305987 25.573169376643577 24.78296916979831 49 23.12557160236704 24.502260767492814 28.855484676070624 23.516682954069523 50 23.137680312946063 24.02930877781798 30.08615703715522 22.746853872080735 51 22.46799739021673 24.391074313293654 27.88450854305145 25.256419753438163 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 466.0 1 1077.0 2 1688.0 3 4333.5 4 6979.0 5 4812.5 6 2646.0 7 2681.5 8 2717.0 9 2778.0 10 2839.0 11 3031.0 12 3223.0 13 3304.5 14 3386.0 15 3288.5 16 3191.0 17 2847.5 18 2504.0 19 2856.5 20 3209.0 21 4528.5 22 5848.0 23 6062.0 24 6276.0 25 8498.5 26 14303.0 27 17885.0 28 19902.0 29 21919.0 30 23274.0 31 24629.0 32 27974.0 33 31319.0 34 34471.5 35 37624.0 36 41217.0 37 44810.0 38 53981.0 39 63152.0 40 76146.0 41 89140.0 42 103071.0 43 117002.0 44 124202.0 45 131402.0 46 127243.0 47 123084.0 48 110598.0 49 98112.0 50 91481.0 51 84850.0 52 82571.5 53 80293.0 54 77761.5 55 75230.0 56 74366.0 57 73502.0 58 71321.5 59 69141.0 60 63376.0 61 57611.0 62 48211.5 63 38812.0 64 31909.0 65 25006.0 66 20954.5 67 16903.0 68 13538.0 69 10173.0 70 8788.5 71 7404.0 72 6134.5 73 4865.0 74 3671.0 75 1843.0 76 1209.0 77 791.5 78 374.0 79 242.0 80 110.0 81 88.0 82 66.0 83 47.5 84 29.0 85 67.0 86 105.0 87 56.0 88 7.0 89 5.5 90 4.0 91 2.5 92 1.0 93 2.5 94 4.0 95 2.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1403948.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.887560355743485 #Duplication Level Percentage of deduplicated Percentage of total 1 72.63946562755721 12.267033599943268 2 11.202874740331007 3.7837844667034806 3 4.570660363368469 2.3156190825596843 4 2.3397467557706664 1.580504582209286 5 1.3472753926940415 1.1376097254964317 6 0.8638019736266433 0.8752504779018171 7 0.5603629653457866 0.6624214378880257 8 0.4016333255044177 0.5426085620267059 9 0.31487555658933947 0.47857319698057144 >10 2.767284266584366 10.97516298721157 >50 1.3524637407713571 16.821014600057474 >100 1.6260052481223475 45.39459322653462 >500 0.00635158300047792 0.6771854399167044 >1k 0.006775021867176449 2.0643787185802895 >5k 4.2343886669852804E-4 0.4242598959900536 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 5933 0.42259399920794793 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4231 0.30136443799912815 No Hit ATCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTG 2660 0.189465706707086 No Hit ATGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCT 2339 0.1666016120255166 No Hit CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 2230 0.1588377917130834 No Hit ATGCCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 1956 0.13932139936806776 No Hit ATTGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 1805 0.12856601526552264 No Hit ATATCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 1708 0.12165692746454998 No Hit ATGTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 1670 0.11895027451159161 No Hit CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 1624 0.11567379988432619 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1592 0.1133945131870981 No Hit ATGGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTC 1449 0.10320895075886002 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.122770928837821E-5 0.0 0.0 0.16909458185060985 0.0 2 7.122770928837821E-5 0.0 0.0 0.7660540133965076 0.0 3 7.122770928837821E-5 0.0 0.0 1.039212278517438 0.0 4 7.122770928837821E-5 0.0 0.0 1.3907210238555845 0.0 5 7.122770928837821E-5 0.0 0.0 2.681509571579574 0.0 6 7.122770928837821E-5 0.0 0.0 2.9708365267089665 0.0 7 7.122770928837821E-5 0.0 0.0 3.403331177507999 0.0 8 7.122770928837821E-5 0.0 0.0 4.757512386498645 0.0 9 7.122770928837821E-5 0.0 0.0 4.929527304430079 0.0 10 7.122770928837821E-5 0.0 0.0 5.26985329940995 0.0 11 7.122770928837821E-5 0.0 0.0 5.527056557650283 0.0 12 7.122770928837821E-5 0.0 0.0 6.187479878172126 0.0 13 7.122770928837821E-5 0.0 0.0 6.809440235678244 0.0 14 1.4245541857675642E-4 0.0 0.0 7.061942465105545 0.0 15 2.136831278651346E-4 0.0 0.0 7.203187012624399 0.0 16 2.136831278651346E-4 0.0 0.0 7.31031348739412 0.0 17 2.136831278651346E-4 0.0 0.0 7.451344351785109 0.0 18 2.136831278651346E-4 0.0 0.0 7.767809064153373 0.0 19 2.136831278651346E-4 0.0 0.0 8.155287802682151 0.0 20 2.136831278651346E-4 0.0 0.0 8.596044867758636 0.0 21 3.56138546441891E-4 0.0 0.0 8.888149703550274 7.122770928837821E-5 22 3.56138546441891E-4 0.0 0.0 9.172704402157345 7.122770928837821E-5 23 3.56138546441891E-4 0.0 0.0 9.607692022781471 7.122770928837821E-5 24 3.56138546441891E-4 0.0 0.0 9.973873676233023 7.122770928837821E-5 25 3.56138546441891E-4 0.0 0.0 10.374387085561574 7.122770928837821E-5 26 3.56138546441891E-4 0.0 0.0 10.700966132648787 7.122770928837821E-5 27 3.56138546441891E-4 0.0 0.0 11.000906016462148 7.122770928837821E-5 28 4.273662557302692E-4 0.0 0.0 11.2727109551066 7.122770928837821E-5 29 4.273662557302692E-4 0.0 0.0 11.533831737357794 7.122770928837821E-5 30 4.273662557302692E-4 0.0 0.0 11.797160578596928 7.122770928837821E-5 31 4.273662557302692E-4 0.0 0.0 12.073452862926548 7.122770928837821E-5 32 4.273662557302692E-4 0.0 0.0 12.350599879767627 7.122770928837821E-5 33 4.273662557302692E-4 0.0 0.0 12.652035545476043 7.122770928837821E-5 34 5.698216743070257E-4 0.0 0.0 12.945636163162739 7.122770928837821E-5 35 5.698216743070257E-4 0.0 0.0 13.244151492790332 7.122770928837821E-5 36 7.12277092883782E-4 0.0 0.0 13.538535615279198 7.122770928837821E-5 37 7.12277092883782E-4 0.0 0.0 13.863761335889933 7.122770928837821E-5 38 7.12277092883782E-4 0.0 0.0 14.18008359283962 7.122770928837821E-5 39 7.12277092883782E-4 0.0 0.0 14.489354306569759 7.122770928837821E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACCCGT 55 1.8189894E-12 45.000004 17 ACACGGC 25 3.891248E-5 45.000004 44 CGTATTG 50 2.1827873E-11 45.000004 3 GTCGATG 45 3.8562575E-10 45.000004 3 GTCGATC 25 3.891248E-5 45.000004 43 ATCGTAC 25 3.891248E-5 45.000004 1 TAGTTCG 25 3.891248E-5 45.000004 2 TCGCTCA 25 3.891248E-5 45.000004 32 CACGTTG 50 2.1827873E-11 45.000004 3 ATACGAC 25 3.891248E-5 45.000004 23 CAATACG 25 3.891248E-5 45.000004 41 ATCGCAC 45 3.8562575E-10 45.000004 1 TGATCGA 20 7.033821E-4 45.0 16 GATCGAA 20 7.033821E-4 45.0 12 CGAGTAC 20 7.033821E-4 45.0 16 CCTACGC 20 7.033821E-4 45.0 15 CGTCTAG 20 7.033821E-4 45.0 3 CGACATA 20 7.033821E-4 45.0 35 CGATTGA 35 1.2121927E-7 45.0 13 TAACGCG 20 7.033821E-4 45.0 23 >>END_MODULE