##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545673_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1154679 Sequences flagged as poor quality 0 Sequence length 52 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.54573089144256 33.0 31.0 34.0 31.0 34.0 2 32.95504984502186 34.0 31.0 34.0 31.0 34.0 3 33.04035407243052 34.0 33.0 34.0 31.0 34.0 4 36.40782243376731 37.0 37.0 37.0 35.0 37.0 5 36.38863528305269 37.0 37.0 37.0 35.0 37.0 6 36.39685315139532 37.0 37.0 37.0 35.0 37.0 7 36.47548452860059 37.0 37.0 37.0 35.0 37.0 8 36.50886869857337 37.0 37.0 37.0 35.0 37.0 9 38.31239071638092 39.0 39.0 39.0 37.0 39.0 10 38.079315550035986 39.0 39.0 39.0 35.0 39.0 11 37.92125950155844 39.0 38.0 39.0 35.0 39.0 12 37.51453780661119 39.0 37.0 39.0 35.0 39.0 13 37.450294843848376 39.0 37.0 39.0 35.0 39.0 14 38.77141699121574 41.0 38.0 41.0 35.0 41.0 15 38.79402240795927 41.0 38.0 41.0 35.0 41.0 16 38.853246659894225 41.0 38.0 41.0 35.0 41.0 17 38.78792547539186 41.0 38.0 41.0 35.0 41.0 18 38.7786804817616 40.0 38.0 41.0 35.0 41.0 19 38.754950943075954 40.0 38.0 41.0 35.0 41.0 20 38.67723756992203 40.0 37.0 41.0 35.0 41.0 21 38.60469273278547 40.0 37.0 41.0 35.0 41.0 22 38.7010796940102 40.0 37.0 41.0 35.0 41.0 23 38.68911186572199 40.0 37.0 41.0 35.0 41.0 24 38.658103247742446 40.0 37.0 41.0 35.0 41.0 25 38.56922140265823 40.0 37.0 41.0 35.0 41.0 26 38.47034024174684 40.0 37.0 41.0 35.0 41.0 27 38.35537755514736 40.0 36.0 41.0 35.0 41.0 28 38.29219202912671 40.0 36.0 41.0 35.0 41.0 29 38.27271562053177 40.0 36.0 41.0 35.0 41.0 30 38.19565091250469 40.0 36.0 41.0 34.0 41.0 31 38.137910189758365 40.0 36.0 41.0 34.0 41.0 32 38.08823144787426 40.0 35.0 41.0 34.0 41.0 33 38.01395279553885 40.0 35.0 41.0 34.0 41.0 34 37.894733514682436 40.0 35.0 41.0 34.0 41.0 35 37.84748661749283 40.0 35.0 41.0 34.0 41.0 36 37.77208037904907 40.0 35.0 41.0 34.0 41.0 37 37.67248213572776 40.0 35.0 41.0 33.0 41.0 38 37.578213512153596 40.0 35.0 41.0 33.0 41.0 39 37.51501672759269 40.0 35.0 41.0 33.0 41.0 40 37.37649684457758 39.0 35.0 41.0 33.0 41.0 41 37.25790371176751 39.0 35.0 41.0 33.0 41.0 42 37.18166953759443 39.0 35.0 41.0 33.0 41.0 43 37.07360747012806 39.0 35.0 41.0 33.0 41.0 44 36.93776971781768 39.0 35.0 41.0 33.0 41.0 45 36.830126814465316 39.0 35.0 41.0 32.0 41.0 46 36.794270095844816 38.0 35.0 41.0 32.0 41.0 47 36.74581593672354 38.0 35.0 41.0 33.0 41.0 48 36.574706909885776 38.0 35.0 40.0 32.0 41.0 49 36.44857834948068 38.0 35.0 40.0 32.0 41.0 50 36.32516223123483 37.0 35.0 40.0 32.0 41.0 51 36.18128068493495 37.0 35.0 40.0 32.0 41.0 52 35.8429173822335 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 2.0 12 8.0 13 16.0 14 20.0 15 37.0 16 47.0 17 98.0 18 203.0 19 318.0 20 516.0 21 852.0 22 1254.0 23 1859.0 24 2782.0 25 3532.0 26 4498.0 27 5697.0 28 7097.0 29 9027.0 30 11462.0 31 14948.0 32 19631.0 33 27563.0 34 63739.0 35 135682.0 36 69611.0 37 102586.0 38 174946.0 39 495966.0 40 680.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.24897655538899 14.063215837475177 45.55283329825865 12.134974308877187 2 25.1257708852417 12.761468771840487 50.20139796428271 11.9113623786351 3 25.49331892240181 13.979642827140704 45.581066253045215 14.945971997412268 4 23.59469601508298 14.803941181921557 46.75697748032137 14.844385322674094 5 23.023195191044437 17.499235718325178 44.146381808277454 15.331187282352932 6 24.690585002411925 19.61315655693054 43.70132305168796 11.994935388969576 7 85.92907639265978 2.988189791275324 6.293783813510075 4.788950002554823 8 87.03553108699474 3.015123683725087 6.6417593114623195 3.307585917817853 9 79.51283430286685 4.647005791219898 8.918062942168344 6.9220969637449015 10 44.98635551525575 22.338762547859623 13.734639670419224 18.940242266465397 11 35.58850555002732 21.95268122136109 24.170007421976152 18.288805806635438 12 30.626520444210037 22.755934766285694 25.86796850033646 20.749576289167813 13 22.733590894092647 25.977089736628102 31.681705478319085 19.60761389096017 14 17.414190437342324 33.26967927882987 29.557392141019278 19.75873814280852 15 18.43811137121226 24.200145668190036 36.935459984982835 20.426282975614868 16 21.64575609325189 21.94168249357614 35.19454324535217 21.218018167819803 17 21.35952935837579 21.988188925233768 27.466767820320626 29.185513896069814 18 23.015660629490966 22.697217148662098 29.689030457815548 24.598091764031388 19 25.85792241826516 25.929803867568392 26.72855399639207 21.483719717774378 20 28.524204562480136 21.19073785874689 25.398400767659236 24.88665681111374 21 25.52969266783236 25.64504940334067 27.30603050717992 21.519227421647056 22 28.448339322010707 21.213254939251517 24.57193730898371 25.76646842975407 23 27.911133743663825 25.48691021487357 21.404736727696616 25.197219313765988 24 27.59017874231713 21.09833122452214 27.28515890563525 24.026331127525484 25 28.698971748858344 22.469967843876955 24.678027399822806 24.153033007441895 26 23.504714297220268 26.364903146242373 24.147836758094673 25.982545798442686 27 25.315693798882634 25.165089171969008 23.81588302896303 25.703334000185336 28 25.314741153168974 25.38489051935646 27.389776725825964 21.910591601648598 29 25.052676977757454 24.10063749319075 25.87221210397002 24.974473425081776 30 26.379972269349317 26.966282404027442 24.797887551432044 21.8558577751912 31 27.95911244596983 27.263767679155855 21.680830776345633 23.096289098528683 32 29.749047137775953 25.665834400729555 24.13865671758125 20.446461743913243 33 27.338940086378983 27.873287727584895 22.691154857757002 22.096617328279113 34 22.526693565917455 25.958643051445467 27.68925389653748 23.8254094860996 35 24.27029503437752 24.385824978197405 29.322521670524882 22.021358316900194 36 27.293299696279227 27.98587313010802 22.2835090964675 22.43731807714525 37 26.379625852726168 28.053684184089256 26.123450759908163 19.44323920327641 38 22.97495667627107 28.346839251428317 27.07436439044964 21.60383968185097 39 22.892163103338678 28.238670660850328 25.562862059498787 23.306304176312203 40 26.77653269869808 23.722350540713048 27.41835609723568 22.08276066335319 41 22.07054947738722 24.502307567730945 27.395665808419484 26.03147714646235 42 23.35644798251289 24.871068063072073 24.829151651671157 26.943332302743876 43 23.605867951179505 22.312175072033007 26.584444681162474 27.497512295625015 44 27.22470920489591 24.024166023630812 24.44930582438929 24.301818947083994 45 22.94464522174561 25.28330384461829 25.06073116424565 26.71131976939045 46 22.285154575427455 26.800522049851082 25.061857018270878 25.85246635645058 47 24.440472200499013 23.317649320720303 28.96406706972241 23.277811409058273 48 23.14340175927682 22.69557166970214 31.376858849948775 22.78416772107226 49 22.917711329295848 22.889045353730346 27.15378040130634 27.03946291566747 50 21.438512348453553 24.44835317867563 30.30876979662746 23.804364676243353 51 22.862371273747943 25.316906257063653 26.711233165234667 25.10948930395374 52 22.17109690225595 22.97348440562269 28.923276512346725 25.932142179774637 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 173.0 1 140.0 2 107.0 3 101.0 4 95.0 5 122.5 6 150.0 7 209.0 8 268.0 9 361.0 10 454.0 11 588.5 12 723.0 13 830.0 14 858.5 15 780.0 16 839.5 17 899.0 18 971.5 19 1044.0 20 1531.5 21 2019.0 22 2195.0 23 2371.0 24 2852.5 25 3334.0 26 5368.0 27 7402.0 28 8390.0 29 9378.0 30 12324.5 31 15271.0 32 16316.5 33 17362.0 34 19385.5 35 21409.0 36 22783.5 37 24158.0 38 28639.5 39 41522.5 40 49924.0 41 58306.0 42 66688.0 43 75283.5 44 83879.0 45 97710.0 46 111541.0 47 114329.0 48 117117.0 49 104011.5 50 90906.0 51 82671.0 52 74436.0 53 69195.0 54 63954.0 55 64277.5 56 64601.0 57 61592.5 58 58584.0 59 59076.0 60 59568.0 61 54445.0 62 49322.0 63 44674.0 64 34350.5 65 28675.0 66 23796.5 67 18918.0 68 16078.5 69 13239.0 70 10207.0 71 7175.0 72 6778.5 73 6382.0 74 5407.0 75 4432.0 76 3205.0 77 1978.0 78 1492.0 79 1006.0 80 760.0 81 514.0 82 324.0 83 134.0 84 124.0 85 114.0 86 99.5 87 85.0 88 51.5 89 11.0 90 4.0 91 3.0 92 2.0 93 2.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1154679.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.677531461033684 #Duplication Level Percentage of deduplicated Percentage of total 1 69.56053698661367 12.296585810272603 2 12.17702701726527 4.305195563991279 3 5.019325130472254 2.6618783372124075 4 2.6710983953442677 1.8887370367685947 5 1.5673644448192057 1.3853567142098546 6 1.029083289294149 1.0914991333512807 7 0.7009326348169788 0.8673531092829663 8 0.5018444089152387 0.7097096261714387 9 0.374850124577114 0.5963782383345894 >10 3.3756288341697096 14.030665814381832 >50 1.5324796596292263 19.535634255072708 >100 1.4790438685450054 37.21454090370491 >500 0.003921892922890303 0.45982714953567516 >1k 0.006863312615058029 2.956638307709881 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCTT 4664 0.4039217825906594 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 3599 0.3116883566774835 No Hit TGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 3335 0.2888248595497103 No Hit GTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 3251 0.28155011046360073 No Hit TTCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 2955 0.2559152803506429 No Hit GCCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 2796 0.2421452195805068 No Hit ATCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 2662 0.23054026270504618 No Hit GGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 2338 0.20248051623005184 No Hit TCCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 1808 0.15658031366293143 No Hit AGCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 1739 0.15060462691362708 No Hit CCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGCT 1491 0.12912679627844623 No Hit ACCTGTCTCTTATACACATCTGACGCGGGAATATTCGTATGCCGTCTTCTGC 1294 0.11206577758840336 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.42219525946172054 0.0 2 0.0 0.0 0.0 0.9924836253192446 0.0 3 0.0 0.0 0.0 3.3517540372692323 0.0 4 0.0 0.0 0.0 3.849901141356169 0.0 5 0.0 0.0 0.0 4.596428964240278 0.0 6 0.0 0.0 0.0 7.02558892991039 0.0 7 0.0 0.0 0.0 7.331734620617505 0.0 8 0.0 0.0 0.0 7.937097669568772 0.0 9 0.0 0.0 0.0 8.310101768543465 0.0 10 0.0 0.0 0.0 9.494673411398319 0.0 11 0.0 0.0 0.0 10.542237279798108 0.0 12 0.0 0.0 0.0 10.98937453612649 0.0 13 0.0 0.0 0.0 11.211340987408622 0.0 14 0.0 0.0 0.0 11.351986136406742 0.0 15 0.0 0.0 0.0 11.554986277571516 0.0 16 0.0 0.0 0.0 12.047850528155443 0.0 17 0.0 0.0 0.0 12.707341174473598 0.0 18 0.0 0.0 0.0 13.428927000491045 0.0 19 0.0 0.0 0.0 13.890960171614795 0.0 20 0.0 0.0 0.0 14.339223281968408 0.0 21 0.0 0.0 0.0 15.037079569300213 0.0 22 0.0 0.0 0.0 15.619752329435281 0.0 23 0.0 0.0 0.0 16.240011293181915 0.0 24 0.0 0.0 0.0 16.73729235571098 0.0 25 0.0 0.0 0.0 17.17992619593844 0.0 26 0.0 0.0 0.0 17.576486625287203 0.0 27 0.0 0.0 0.0 17.954686973609114 0.0 28 0.0 0.0 0.0 18.335052425825705 0.0 29 0.0 0.0 0.0 18.71446523232864 0.0 30 0.0 0.0 0.0 19.116048702713048 0.0 31 8.66041557870196E-5 0.0 0.0 19.52750504685718 0.0 32 8.66041557870196E-5 0.0 0.0 19.92241999724599 0.0 33 8.66041557870196E-5 0.0 0.0 20.312831531533874 0.0 34 8.66041557870196E-5 0.0 0.0 20.699778899590275 0.0 35 8.66041557870196E-5 0.0 0.0 21.13522459488741 0.0 36 8.66041557870196E-5 0.0 0.0 21.538107127608626 0.0 37 8.66041557870196E-5 0.0 0.0 21.931289994881695 0.0 38 8.66041557870196E-5 0.0 0.0 22.34846221330777 0.0 39 8.66041557870196E-5 0.0 0.0 22.77758580523245 0.0 40 8.66041557870196E-5 0.0 0.0 23.222298145198796 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCCTA 35 1.01957994E-7 46.000004 31 CGTTAAT 35 1.01957994E-7 46.000004 22 GTCAAGC 70 0.0 46.000004 16 TATCGGA 35 1.01957994E-7 46.000004 23 CGCTTTA 35 1.01957994E-7 46.000004 18 CGGACAA 20 6.311467E-4 46.0 11 AACCGTA 20 6.311467E-4 46.0 15 CTATGCG 20 6.311467E-4 46.0 1 AGCCGAC 30 1.86141E-6 46.0 13 GTCGATC 25 3.417165E-5 46.0 41 GTCGACG 30 1.86141E-6 46.0 1 CGAGTGT 20 6.311467E-4 46.0 35 ACGTTGT 20 6.311467E-4 46.0 37 ACGCATA 20 6.311467E-4 46.0 20 AACCCGT 20 6.311467E-4 46.0 23 GTTAGTC 20 6.311467E-4 46.0 16 AAGCGTA 25 3.417165E-5 46.0 24 CGATTGA 20 6.311467E-4 46.0 11 TACGGGT 30 1.86141E-6 46.0 4 TCGATGA 30 1.86141E-6 46.0 1 >>END_MODULE