##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545662_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1296732 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.88221775972213 31.0 31.0 34.0 31.0 34.0 2 32.570630631464326 34.0 31.0 34.0 31.0 34.0 3 32.473730886567154 34.0 31.0 34.0 31.0 34.0 4 35.93188029600565 37.0 35.0 37.0 35.0 37.0 5 35.680434353436176 37.0 35.0 37.0 33.0 37.0 6 35.66310155066737 37.0 35.0 37.0 33.0 37.0 7 35.64040912077438 37.0 35.0 37.0 33.0 37.0 8 35.603629739992535 37.0 35.0 37.0 33.0 37.0 9 37.87845059734779 39.0 38.0 39.0 35.0 39.0 10 37.86160286011296 39.0 38.0 39.0 35.0 39.0 11 37.64250515912309 39.0 37.0 39.0 35.0 39.0 12 37.03893248566396 39.0 37.0 39.0 33.0 39.0 13 36.74047528710636 39.0 35.0 39.0 32.0 39.0 14 37.27825873040844 39.0 35.0 41.0 32.0 41.0 15 37.061587899427174 39.0 35.0 41.0 31.0 41.0 16 37.13252931214777 39.0 35.0 41.0 32.0 41.0 17 37.30040363004846 39.0 35.0 41.0 32.0 41.0 18 37.408058102985045 39.0 35.0 41.0 32.0 41.0 19 37.38269202888492 39.0 35.0 41.0 32.0 41.0 20 37.35484741642838 39.0 35.0 41.0 32.0 41.0 21 37.337018751754414 39.0 35.0 41.0 32.0 41.0 22 37.258565378196884 39.0 35.0 41.0 32.0 41.0 23 37.206947156390065 39.0 35.0 41.0 32.0 41.0 24 37.13852823868 39.0 35.0 41.0 32.0 41.0 25 37.08524274869441 39.0 35.0 41.0 32.0 41.0 26 36.993418069423754 39.0 35.0 41.0 32.0 41.0 27 36.88504872248082 39.0 35.0 41.0 31.0 41.0 28 36.81154779861991 38.0 35.0 41.0 31.0 41.0 29 36.779214980427724 38.0 35.0 41.0 31.0 41.0 30 36.750047812500966 38.0 35.0 41.0 31.0 41.0 31 36.74102898671429 38.0 35.0 41.0 31.0 41.0 32 36.629230249581255 38.0 35.0 41.0 31.0 41.0 33 36.50616704145498 38.0 35.0 41.0 31.0 41.0 34 36.401459977852014 38.0 35.0 41.0 30.0 41.0 35 36.34488236582424 38.0 35.0 41.0 30.0 41.0 36 36.27305565066644 38.0 35.0 41.0 30.0 41.0 37 36.13474025473267 38.0 35.0 41.0 30.0 41.0 38 36.04072931029696 38.0 35.0 40.0 30.0 41.0 39 35.987142293087544 38.0 35.0 40.0 30.0 41.0 40 35.91535722107575 38.0 35.0 40.0 30.0 41.0 41 35.91917682296727 38.0 35.0 40.0 30.0 41.0 42 35.778939672962494 38.0 35.0 40.0 29.0 41.0 43 35.695171400104265 38.0 35.0 40.0 29.0 41.0 44 35.62814675661586 38.0 35.0 40.0 29.0 41.0 45 35.60288247687263 38.0 34.0 40.0 29.0 41.0 46 35.55183800507738 38.0 34.0 40.0 29.0 41.0 47 35.394696822473726 37.0 34.0 40.0 28.0 41.0 48 35.39017699879389 37.0 34.0 40.0 28.0 41.0 49 35.380878238525774 37.0 34.0 40.0 28.0 41.0 50 35.28370627084085 37.0 34.0 40.0 28.0 41.0 51 35.179011545947816 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 9.0 12 9.0 13 9.0 14 7.0 15 20.0 16 49.0 17 123.0 18 280.0 19 529.0 20 1026.0 21 1830.0 22 2877.0 23 4388.0 24 6585.0 25 9900.0 26 13383.0 27 16253.0 28 18909.0 29 22656.0 30 28109.0 31 34440.0 32 43039.0 33 55597.0 34 86936.0 35 184002.0 36 91409.0 37 117892.0 38 176987.0 39 379281.0 40 196.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 1.2761310741155458 92.13052504295413 3.179299963292338 3.414043919637982 2 3.4652495658316442 1.9694123380929907 91.79190457241742 2.7734335236579337 3 25.56973993084153 15.656126323712224 45.558141543510914 13.215992201935325 4 25.092000505887107 16.633043682117815 45.63309920631248 12.641856605682591 5 22.86170156979237 13.121369720188905 49.12495411542246 14.891974594596261 6 19.790365318354137 14.75300987405262 50.31324899825099 15.143375809342254 7 22.017888044715484 17.185200951314535 47.402393092790184 13.394517911179795 8 22.543362853696834 18.610630415536903 45.639422795149656 13.206583935616612 9 82.11234086920042 3.2259557102007204 10.06908135219922 4.592622068399638 10 83.93291751880882 3.357748555599769 9.282488594405013 3.4268453311863976 11 77.16243603150073 6.269838332053192 10.368372184846214 6.199353451599868 12 39.27087478368699 30.101054034295444 15.255195368048295 15.37287581396927 13 33.03242304500853 23.016629496303015 29.884741025902034 14.066206432786421 14 30.55542702732716 26.22253480287369 25.910828143363467 17.311210026435685 15 20.098833066508732 35.844106569437635 30.26670121505446 13.790359148999176 16 15.240003331451678 39.77884404796057 28.44219160165709 16.538961018930664 17 13.352874765178926 27.519564566926707 41.73630326081257 17.391257407081802 18 16.327814845318848 24.51801914350845 40.36223367665794 18.791932334514765 19 16.32380476459284 22.76021568064951 29.35194010790202 31.564039446855634 20 18.679650074186494 24.432033758710357 35.768454854202716 21.11986131290043 21 22.790059935283466 26.965402257366982 29.568175999358388 20.676361807991164 22 23.535395131761998 25.11189667564308 28.89972638910739 22.45298180348754 23 19.098163691495234 28.874663384569825 30.586967854575963 21.44020506935897 24 26.03791685560316 22.52470055493348 26.43476061360405 25.002621975859313 25 20.69317330026559 28.09130953813124 24.331396155874923 26.884121005728247 26 20.33396260753957 22.999895120965625 35.40461714525438 21.26152512624043 27 21.309106276393273 25.735849813222778 30.94818358766499 22.006860322718957 28 17.84162031938751 31.913224937766632 27.255516174506372 22.989638568339487 29 16.159699922574593 32.42304500852914 25.88568802188887 25.531567047007396 30 16.318406579000133 27.41376012930968 33.22729754490519 23.040535746784997 31 16.516905574937613 23.823349774664308 33.70388021580404 25.95586443459404 32 17.85457596481 32.11365185713008 26.818340258434283 23.213431919625645 33 21.723532696038966 29.166473874324073 23.888976288084198 25.221017141552764 34 24.221581637531887 26.035603347492003 28.406177992060037 21.33663702291607 35 21.93722372857306 30.239247585468704 22.797617395113253 25.025911290844988 36 17.332648534932428 27.53413966802701 25.93920717619369 29.19400462084687 37 19.02713899248264 26.1555201845871 30.1298957687479 24.687445054182362 38 23.101303893171448 27.32546123640043 25.032157762745115 24.54107710768301 39 19.899562901200866 32.84795933161208 29.076478408799964 18.175999358387084 40 18.41390510915131 28.149147240910228 30.31235444178134 23.124593208157123 41 19.682710074248185 29.86908628768319 26.5216714016466 23.92653223642202 42 23.838927395946115 25.215310488211905 26.43738258946336 24.508379526378622 43 18.730084551009767 25.680788320177182 28.828470339283673 26.76065678952937 44 18.808589592915112 25.638836706428158 26.940570603640534 28.612003097016192 45 18.519786663705375 24.844146670244893 28.893711268018375 27.74235539803136 46 21.513311925671612 26.819882597175056 27.6326951135624 24.034110363590937 47 16.850590561503843 31.471807590157415 26.085652239630086 25.591949608708664 48 18.81044039940404 29.185753108583732 25.47665978783588 26.527146704176346 49 18.959353204825668 26.755798422495936 30.098123590687976 24.186724781990417 50 18.99135673369671 23.819108343127184 33.42286609723521 23.766668825940904 51 18.56482295493595 23.759265599985195 29.100616010093066 28.575295434985794 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 725.0 1 792.5 2 860.0 3 3037.5 4 5215.0 5 3641.5 6 2068.0 7 2256.0 8 2444.0 9 3046.5 10 3649.0 11 3887.5 12 4126.0 13 4122.0 14 4118.0 15 4636.0 16 5154.0 17 5032.0 18 4910.0 19 4563.0 20 4216.0 21 4551.5 22 4887.0 23 6109.5 24 7332.0 25 8875.0 26 12330.0 27 14242.0 28 15960.5 29 17679.0 30 23810.0 31 29941.0 32 31751.5 33 33562.0 34 38593.0 35 43624.0 36 49597.5 37 55571.0 38 70879.0 39 86187.0 40 102207.0 41 118227.0 42 120117.5 43 122008.0 44 128721.5 45 135435.0 46 140259.5 47 145084.0 48 151130.5 49 157177.0 50 135368.0 51 113559.0 52 87952.5 53 62346.0 54 48599.5 55 34853.0 56 30254.5 57 25656.0 58 21164.0 59 16672.0 60 14087.5 61 11503.0 62 9023.5 63 6544.0 64 4642.0 65 2740.0 66 2198.0 67 1656.0 68 1395.5 69 1135.0 70 866.5 71 598.0 72 463.5 73 329.0 74 188.5 75 38.0 76 28.0 77 94.0 78 160.0 79 91.0 80 22.0 81 14.0 82 6.0 83 6.5 84 7.0 85 5.0 86 3.0 87 3.5 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1296732.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.44485811278456 #Duplication Level Percentage of deduplicated Percentage of total 1 66.44372137142174 11.591012918098434 2 12.152702143560692 4.24004329162698 3 5.985047017190437 3.1322488803969484 4 3.640240784232217 2.5401393590921044 5 2.4030665671714004 2.096057764994067 6 1.6054131926184965 1.6803723214573278 7 1.126842436485468 1.3760324493967402 8 0.8126225217327019 1.1340867672704136 9 0.5841329800973539 0.917110526111671 >10 3.403643714646397 11.194097949200751 >50 0.6323971547683133 7.955259792624957 >100 1.1750862851867887 44.6200322242349 >500 0.025757749259574355 2.9327200590478153 >1k 0.008881982503301501 3.7805012136155143 >5k 0.0 0.0 >10k+ 4.440991251650751E-4 0.8102844828313591 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 10459 0.8065660444872187 No Hit ATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTG 4504 0.3473346844220703 No Hit ATGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT 3936 0.3035322641841182 No Hit CTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGCT 3836 0.29582057048025345 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3805 0.29342994543205536 No Hit ATTGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 3460 0.26682460215372183 No Hit ATATCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 3298 0.25433165835346083 No Hit ATGTCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 2916 0.22487298840469733 No Hit ATGCCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 2850 0.2197832705601466 No Hit CCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCTGC 2470 0.19047883448546038 No Hit ATTTCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 2170 0.16734375337386598 No Hit ATGGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 2143 0.1652615960738225 No Hit ATAGCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 2091 0.16125151534781282 No Hit ATTTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 1822 0.14050705928441654 No Hit ATACCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 1763 0.1359571599991363 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1535 0.11837449835432456 No Hit ATCCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTCT 1421 0.10958316753191871 No Hit ATCTCTGTCTCTTATACACATCTGACGCCCTACGCATCGTATGCCGTCTTC 1394 0.10750101023187522 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3268215791697899 0.0 2 7.711693703864793E-5 0.0 0.0 1.4405443838819432 0.0 3 7.711693703864793E-5 0.0 0.0 1.9466628416665896 0.0 4 7.711693703864793E-5 0.0 0.0 2.579407310068696 0.0 5 7.711693703864793E-5 0.0 0.0 4.944198184358834 0.0 6 7.711693703864793E-5 0.0 0.0 5.512472893396631 0.0 7 7.711693703864793E-5 0.0 0.0 6.383662931122236 0.0 8 7.711693703864793E-5 0.0 0.0 8.99461106843974 0.0 9 7.711693703864793E-5 0.0 0.0 9.273620146645568 0.0 10 1.5423387407729585E-4 0.0 0.0 9.895645360799302 0.0 11 2.3135081111594376E-4 0.0 0.0 10.332898393808435 0.0 12 3.084677481545917E-4 0.0 0.0 11.713831385359503 0.0 13 3.855846851932396E-4 0.0 0.0 12.96543927349676 0.0 14 3.855846851932396E-4 0.0 0.0 13.466930715059087 0.0 15 3.855846851932396E-4 0.0 0.0 13.725041103327442 0.0 16 3.855846851932396E-4 0.0 0.0 13.861846549634002 0.0 17 3.855846851932396E-4 0.0 0.0 14.071064799819855 0.0 18 3.855846851932396E-4 0.0 0.0 14.603017431512448 0.0 19 4.6270162223188753E-4 0.0 0.0 15.413130855103445 0.0 20 6.169354963091834E-4 0.0 0.0 16.276763432999264 0.0 21 6.169354963091834E-4 0.0 0.0 16.776712535820817 0.0 22 6.169354963091834E-4 0.0 0.0 17.334499341421356 0.0 23 6.940524333478313E-4 0.0 0.0 18.1921939151652 0.0 24 7.711693703864792E-4 0.0 0.0 18.94508657147352 0.0 25 8.482863074251272E-4 0.0 0.0 19.71517630474146 0.0 26 8.482863074251272E-4 0.0 0.0 20.32308911941712 0.0 27 8.482863074251272E-4 0.0 0.0 20.847561408216965 0.0 28 8.482863074251272E-4 0.0 0.0 21.3438860149977 0.0 29 8.482863074251272E-4 0.0 0.0 21.792166770003362 0.0 30 8.482863074251272E-4 0.0 0.0 22.26682151747624 0.0 31 8.482863074251272E-4 0.0 0.0 22.75566578136423 0.0 32 8.482863074251272E-4 0.0 0.0 23.34938907962478 0.0 33 8.482863074251272E-4 0.0 0.0 23.871008041754195 0.0 34 9.254032444637751E-4 0.0 0.0 24.39555744749108 0.0 35 9.254032444637751E-4 0.0 0.0 24.87776965479374 0.0 36 9.254032444637751E-4 0.0 0.0 25.358593757229713 0.0 37 0.001002520181502423 0.0 0.0 25.945607881967902 0.0 38 0.001002520181502423 0.0 0.0 26.49205849782376 0.0 39 0.001002520181502423 0.0 0.0 27.00812504048639 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTAT 220 0.0 45.000004 8 ATCTCGC 50 2.1827873E-11 45.000004 1 GTCGCGG 25 3.8910828E-5 45.000004 3 GTACCGC 25 3.8910828E-5 45.000004 28 TACCCGG 25 3.8910828E-5 45.000004 27 CCGGCTA 50 2.1827873E-11 45.000004 42 CGTTGTG 25 3.8910828E-5 45.000004 3 CGCATAT 25 3.8910828E-5 45.000004 34 GGTCCCG 25 3.8910828E-5 45.000004 11 CCGTGAG 50 2.1827873E-11 45.000004 24 ATGTCGC 25 3.8910828E-5 45.000004 1 GACCCGT 25 3.8910828E-5 45.000004 32 TAGCCCG 50 2.1827873E-11 45.000004 2 CCGTCGG 25 3.8910828E-5 45.000004 42 CACCTAG 25 3.8910828E-5 45.000004 42 CGTTAAC 25 3.8910828E-5 45.000004 36 CCCGTAT 25 3.8910828E-5 45.000004 34 CCGTAGT 25 3.8910828E-5 45.000004 22 CGTAGCG 50 2.1827873E-11 45.000004 3 CTACGAT 25 3.8910828E-5 45.000004 36 >>END_MODULE