##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545652_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2125307 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.87535871288242 31.0 31.0 34.0 31.0 34.0 2 32.53862430227727 34.0 31.0 34.0 31.0 34.0 3 32.515126050024776 34.0 31.0 34.0 31.0 34.0 4 35.9973152114024 37.0 35.0 37.0 35.0 37.0 5 35.77574675093998 37.0 35.0 37.0 35.0 37.0 6 35.77962948411688 37.0 35.0 37.0 35.0 37.0 7 35.75737528742906 37.0 35.0 37.0 33.0 37.0 8 35.729222178254716 37.0 35.0 37.0 33.0 37.0 9 37.86832725813259 39.0 38.0 39.0 35.0 39.0 10 37.782185820683786 39.0 38.0 39.0 35.0 39.0 11 37.61297638411768 39.0 37.0 39.0 35.0 39.0 12 37.18091880373047 39.0 37.0 39.0 33.0 39.0 13 36.95139102256756 39.0 37.0 39.0 33.0 39.0 14 37.70857716085253 40.0 36.0 41.0 33.0 41.0 15 37.62779024395064 40.0 36.0 41.0 33.0 41.0 16 37.635494072150514 40.0 36.0 41.0 33.0 41.0 17 37.7337895184084 40.0 36.0 41.0 33.0 41.0 18 37.77229219119873 40.0 36.0 41.0 33.0 41.0 19 37.74135971885473 40.0 36.0 41.0 33.0 41.0 20 37.66641854565011 40.0 36.0 41.0 33.0 41.0 21 37.65498537387775 40.0 36.0 41.0 33.0 41.0 22 37.60909600354208 40.0 35.0 41.0 33.0 41.0 23 37.547653115526366 40.0 35.0 41.0 32.0 41.0 24 37.4888601976091 40.0 35.0 41.0 32.0 41.0 25 37.40395575792109 39.0 35.0 41.0 32.0 41.0 26 37.30512485960852 39.0 35.0 41.0 32.0 41.0 27 37.189514267821075 39.0 35.0 41.0 32.0 41.0 28 37.12403243390249 39.0 35.0 41.0 32.0 41.0 29 37.07384956620385 39.0 35.0 41.0 31.0 41.0 30 37.011754537109226 39.0 35.0 41.0 31.0 41.0 31 36.927802430425345 39.0 35.0 41.0 31.0 41.0 32 36.8484364847055 39.0 35.0 41.0 31.0 41.0 33 36.73038342225382 39.0 35.0 41.0 31.0 41.0 34 36.65789695324017 39.0 35.0 41.0 31.0 41.0 35 36.56627630737583 39.0 35.0 41.0 30.0 41.0 36 36.472910031350764 39.0 35.0 41.0 30.0 41.0 37 36.33992689056216 38.0 35.0 41.0 30.0 41.0 38 36.28011953096659 38.0 35.0 41.0 30.0 41.0 39 36.222443157623815 38.0 35.0 41.0 30.0 41.0 40 36.14049029152024 38.0 35.0 41.0 30.0 41.0 41 36.084623539093414 38.0 35.0 40.0 30.0 41.0 42 35.94715351711541 38.0 35.0 40.0 29.0 41.0 43 35.83197768604724 38.0 35.0 40.0 29.0 41.0 44 35.78110691773 38.0 35.0 40.0 29.0 41.0 45 35.75332740164127 38.0 35.0 40.0 29.0 41.0 46 35.68216874079839 38.0 35.0 40.0 29.0 41.0 47 35.593211710119995 37.0 34.0 40.0 29.0 41.0 48 35.527663532844905 37.0 34.0 40.0 29.0 41.0 49 35.49825742822096 37.0 34.0 40.0 29.0 41.0 50 35.37868458533285 37.0 34.0 40.0 28.0 41.0 51 35.22749748624552 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 11.0 10 14.0 11 21.0 12 30.0 13 37.0 14 49.0 15 62.0 16 105.0 17 300.0 18 592.0 19 1129.0 20 2015.0 21 3133.0 22 4855.0 23 7211.0 24 10355.0 25 14670.0 26 19992.0 27 24310.0 28 28805.0 29 34360.0 30 41823.0 31 51278.0 32 64683.0 33 83199.0 34 133722.0 35 243687.0 36 158621.0 37 215496.0 38 324278.0 39 656137.0 40 325.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 2.6297377273024556 90.47511724188553 3.33161279758642 3.5635322332255996 2 3.6917019517650864 2.7795513777538963 90.14020092156098 3.388545748920038 3 29.02808864789887 15.929275158835877 41.539269385552295 13.503366807712958 4 27.495133644221752 15.920899898226468 42.772926452507804 13.811040005043978 5 25.444088783408702 14.440596111526476 45.03424681704808 15.081068288016745 6 23.52620115588007 15.171831645969263 46.32544851167385 14.976518686476826 7 22.98698493911703 18.083787424593247 42.993224037750785 15.936003598538939 8 25.592867289290446 19.73780729089962 42.63228794710599 12.037037472703943 9 80.47162127636149 4.8036824797546895 9.670602882313002 5.054093361570822 10 81.01126096135758 5.170688281740002 9.346179163763164 4.47187159313925 11 74.29571351338889 7.430502981451621 11.167421930102334 7.106361575057156 12 41.911074494178955 23.125129687146377 17.162744017687796 17.80105180098687 13 33.363132949733846 24.52055161913079 24.272305130505853 17.84401030062951 14 28.55573335993341 23.65799388041351 28.021316449811724 19.764956309841356 15 22.605393009104098 26.665465271605466 31.299478145980792 19.429663573309643 16 17.26188263624973 33.119685767750255 30.027473677920412 19.5909579180796 17 17.53440797023677 24.503236473601227 38.385560297876964 19.57679525828504 18 21.12513627443 21.3166380198249 37.03441432226027 20.523811383484833 19 20.79450168846195 21.992775631944 29.338914330964894 27.873808348629165 20 21.835057241142103 22.890763546160624 32.20137137834675 23.07280783435052 21 25.700192960358198 23.888313547172242 27.71839550709615 22.693097985373406 22 26.822054413785867 22.095537256499885 27.672002209563136 23.410406120151112 23 25.882613664755254 24.326979584596483 27.77099967204738 22.01940707860088 24 28.312427334027507 21.847102559771365 25.960531819638295 23.879938286562837 25 26.63196422916783 24.984061126227882 25.015962399785067 23.36801224481922 26 26.099429400081963 22.081562804808904 30.23469079996443 21.5843169951447 27 26.567832317872192 23.58732173751839 26.756322733609778 23.088523210999632 28 22.977292221782548 27.518989021350798 25.694593769276626 23.809124987590028 29 21.75775076259571 27.415098148173417 26.63370515412597 24.193445935104904 30 20.36345807923279 27.575498504451357 28.7674674764634 23.293575939852452 31 20.55580676109381 27.56641746345351 27.8500941275778 24.02768164787487 32 22.056248814877097 26.624624113128124 26.83207649530162 24.487050576693157 33 23.860035279609015 27.820639559367187 24.722169550093234 23.59715561093056 34 25.669467987448403 28.063710325143614 24.379583749547713 21.88723793786027 35 25.19664217922399 25.602371798521347 24.698831745249038 24.502154277005626 36 22.120098414017363 27.924059912285614 26.576819254818247 23.37902241887878 37 22.54427242746577 26.470058208061236 27.39867699113587 23.586992373337125 38 25.19301917323003 26.620295326745737 24.294937154961612 23.89174834506262 39 23.168605759073866 28.079378649766834 26.60575625074401 22.14625934041529 40 22.774874406379876 27.48002994390928 26.57371382110914 23.171381828601703 41 22.32976224140795 28.257235307652024 25.163047032734564 24.249955418205463 42 24.60675093057144 24.592447114699194 27.435471675386193 23.365330279343173 43 21.488989590680312 25.2240264582952 28.639203653872126 24.647780297152362 44 21.41652947080116 26.71345833801893 25.956720605540752 25.913291585639158 45 21.459205658288425 24.187893796049227 27.402441153207512 26.950459392454828 46 23.677567523186063 25.47711930558738 26.491655087947297 24.35365808327926 47 20.299561428066628 26.600392319791915 26.570184919166973 26.529861332974487 48 21.07300262973773 27.0015578925774 26.236162587334444 25.68927689035043 49 22.885587823312115 25.46272138566334 28.66367070733781 22.988020083686735 50 21.59523306515247 23.902382102915016 30.01312281002227 24.489262021910246 51 20.73968607829363 24.548218210357376 27.631584519318857 27.080511192030137 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 748.0 1 1673.0 2 2598.0 3 6042.5 4 9487.0 5 6697.5 6 3908.0 7 4073.0 8 4238.0 9 4437.5 10 4637.0 11 4954.0 12 5271.0 13 5205.5 14 5140.0 15 5184.0 16 5228.0 17 5464.5 18 5701.0 19 6515.5 20 7330.0 21 6450.0 22 5570.0 23 7765.5 24 9961.0 25 12195.5 26 19435.5 27 24441.0 28 27582.5 29 30724.0 30 34685.0 31 38646.0 32 44340.5 33 50035.0 34 55988.0 35 61941.0 36 67511.0 37 73081.0 38 89109.0 39 105137.0 40 123443.0 41 141749.0 42 158813.5 43 175878.0 44 193059.0 45 210240.0 46 198478.0 47 186716.0 48 169814.5 49 152913.0 50 143240.5 51 133568.0 52 120048.5 53 106529.0 54 110737.5 55 114946.0 56 113455.0 57 111964.0 58 106314.5 59 100665.0 60 86068.5 61 71472.0 62 61320.5 63 51169.0 64 43490.0 65 35811.0 66 28153.0 67 20495.0 68 19112.5 69 17730.0 70 14987.5 71 12245.0 72 9216.5 73 6188.0 74 4773.5 75 2530.5 76 1702.0 77 1243.0 78 784.0 79 672.5 80 561.0 81 407.0 82 253.0 83 154.0 84 55.0 85 41.5 86 28.0 87 22.0 88 16.0 89 10.5 90 5.0 91 8.0 92 11.0 93 6.5 94 2.0 95 1.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2125307.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.875575354837087 #Duplication Level Percentage of deduplicated Percentage of total 1 71.86650504067792 10.690556112213837 2 10.951062507947519 3.2580671110500905 3 4.875360780035617 2.1757138999631143 4 2.6287617259901896 1.564173725795147 5 1.669676265001009 1.2418697549102722 6 1.1198413603970745 0.9994970725229976 7 0.79591423304639 0.8287777504768258 8 0.5600876942377392 0.6665301360760354 9 0.3764767234681143 0.5040277082362887 >10 2.5212492865294722 7.800271261807463 >50 0.7419765091770046 8.162513624537016 >100 1.8698812547237205 57.59504317080012 >500 0.015577045474554676 1.5014821998922316 >1k 0.006993775519187814 2.3345775958010675 >5k 6.357977744716194E-4 0.6768988759175272 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 9019 0.42436222155199227 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5295 0.24914047711695297 No Hit ATGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCT 3974 0.18698475090892752 No Hit GCCAGACAAAGGTTGCCAATCTTTGTGGTATAAACCAGAAGCTAATGGCTG 3889 0.1829853287078055 No Hit ATCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTG 3832 0.180303363231759 No Hit CTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGCT 3324 0.15640093407681807 No Hit ATGCCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 3116 0.14661411269054306 No Hit ATGTCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 2903 0.13659203117479027 No Hit ATTGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 2845 0.1338630136728482 No Hit ATATCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 2397 0.11278370607164048 No Hit ATAGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 2345 0.11033700072507172 No Hit CCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTCTGC 2276 0.10709041093827858 No Hit ATGGCTGTCTCTTATACACATCTGACGCACACAACTTCGTATGCCGTCTTC 2263 0.10647873460163637 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.410405179110594E-5 0.0 0.0 0.1668935358515264 0.0 2 9.410405179110594E-5 0.0 0.0 0.7521736859663098 0.0 3 9.410405179110594E-5 0.0 0.0 1.0194762450789463 0.0 4 9.410405179110594E-5 0.0 0.0 1.3663908320068583 0.0 5 9.410405179110594E-5 0.0 0.0 2.681165591606295 0.0 6 1.4115607768665892E-4 0.0 0.0 2.9872860720827625 0.0 7 2.3526012947776485E-4 0.0 0.0 3.4593119958669503 0.0 8 2.3526012947776485E-4 0.0 0.0 4.8863528892531765 0.0 9 2.8231215537331784E-4 0.0 0.0 5.0651505876562775 0.0 10 2.8231215537331784E-4 0.0 0.0 5.409242053030456 0.0 11 2.8231215537331784E-4 0.0 0.0 5.6697220683882374 0.0 12 2.8231215537331784E-4 0.0 0.0 6.386042110622136 0.0 13 4.2346823305997673E-4 0.0 0.0 7.012445731369633 0.0 14 4.2346823305997673E-4 0.0 0.0 7.287605978806827 0.0 15 4.705202589555297E-4 0.0 0.0 7.440713271070956 0.0 16 5.175722848510827E-4 0.0 0.0 7.554861485893567 0.0 17 5.175722848510827E-4 0.0 0.0 7.713662073291059 0.0 18 5.175722848510827E-4 0.0 0.0 8.039497352617763 0.0 19 5.646243107466357E-4 0.0 0.0 8.439345468678171 0.0 20 5.646243107466357E-4 0.0 0.0 8.907089658105864 0.0 21 5.646243107466357E-4 0.0 0.0 9.200600195642323 0.0 22 6.587283625377416E-4 0.0 0.0 9.512272815174466 0.0 23 6.587283625377416E-4 0.0 0.0 9.968771570413121 0.0 24 7.057803884332946E-4 0.0 0.0 10.379818068636672 0.0 25 7.528324143288475E-4 0.0 0.0 10.799663295702691 0.0 26 7.528324143288475E-4 0.0 0.0 11.119758227870138 0.0 27 7.528324143288475E-4 0.0 0.0 11.414398014028091 0.0 28 7.528324143288475E-4 0.0 0.0 11.693651787718197 0.0 29 7.528324143288475E-4 0.0 0.0 11.947638623502392 0.0 30 7.998844402244005E-4 0.0 0.0 12.217952512272344 0.0 31 8.469364661199535E-4 0.0 0.0 12.513674495025896 0.0 32 8.469364661199535E-4 0.0 0.0 12.829393588785056 0.0 33 8.939884920155064E-4 0.0 0.0 13.132926207837269 0.0 34 8.939884920155064E-4 0.0 0.0 13.421402178602904 0.0 35 8.939884920155064E-4 0.0 0.0 13.712042542559734 0.0 36 8.939884920155064E-4 0.0 0.0 14.006070652381045 0.0 37 9.410405179110594E-4 0.0 0.0 14.352279458920522 0.0 38 9.410405179110594E-4 0.0 0.0 14.664046182504457 0.0 39 9.880925438066125E-4 0.0 0.0 14.977600883072421 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGAATA 30 2.1663745E-6 45.000004 44 AAATCGT 30 2.1663745E-6 45.000004 40 CTCCGAT 20 7.03464E-4 45.000004 22 CCGATCA 20 7.03464E-4 45.000004 24 GACACGT 20 7.03464E-4 45.000004 11 CCAATCG 40 6.8193913E-9 45.000004 18 ACCGAAC 30 2.1663745E-6 45.000004 34 CGTTCGA 20 7.03464E-4 45.000004 21 AATGCGT 30 2.1663745E-6 45.000004 32 CTACGAC 30 2.1663745E-6 45.000004 31 ACTACGT 20 7.03464E-4 45.000004 29 ACTACGA 30 2.1663745E-6 45.000004 44 ACGCTAA 20 7.03464E-4 45.000004 29 TACTACG 30 2.1663745E-6 45.000004 43 CGGTCTA 30 2.1663745E-6 45.000004 33 CAATCGT 40 6.8193913E-9 45.000004 19 CGATCAA 30 2.1663745E-6 45.000004 34 TCGACTA 20 7.03464E-4 45.000004 2 TCGACGA 20 7.03464E-4 45.000004 2 TGTCGAC 30 2.1663745E-6 45.000004 29 >>END_MODULE