##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545650_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1052078 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.96280979166944 31.0 31.0 34.0 31.0 34.0 2 32.63150165672127 34.0 31.0 34.0 31.0 34.0 3 32.552978011136055 34.0 31.0 34.0 31.0 34.0 4 35.99207283110188 37.0 35.0 37.0 35.0 37.0 5 35.74153627392646 37.0 35.0 37.0 35.0 37.0 6 35.74945013582643 37.0 35.0 37.0 35.0 37.0 7 35.71897901106192 37.0 35.0 37.0 33.0 37.0 8 35.69715933609485 37.0 35.0 37.0 33.0 37.0 9 37.91174513676743 39.0 38.0 39.0 35.0 39.0 10 37.85667507542217 39.0 38.0 39.0 35.0 39.0 11 37.68735968245701 39.0 38.0 39.0 35.0 39.0 12 37.18510129477092 39.0 37.0 39.0 33.0 39.0 13 36.90072504129922 39.0 37.0 39.0 33.0 39.0 14 37.27529612823384 39.0 35.0 41.0 33.0 41.0 15 37.02652274831334 39.0 35.0 41.0 32.0 41.0 16 37.10517185988111 39.0 35.0 41.0 32.0 41.0 17 37.28212166778509 39.0 35.0 41.0 32.0 41.0 18 37.399719412439005 39.0 35.0 41.0 33.0 41.0 19 37.37803755995278 39.0 35.0 41.0 33.0 41.0 20 37.35509344364201 39.0 35.0 41.0 33.0 41.0 21 37.33004967312309 39.0 35.0 41.0 33.0 41.0 22 37.235881750212435 39.0 35.0 41.0 32.0 41.0 23 37.14409387897095 39.0 35.0 41.0 32.0 41.0 24 37.10764981303667 39.0 35.0 41.0 32.0 41.0 25 37.03355359583605 39.0 35.0 41.0 32.0 41.0 26 36.957843429859764 39.0 35.0 41.0 32.0 41.0 27 36.89226749347482 38.0 35.0 41.0 32.0 41.0 28 36.73801847391543 38.0 35.0 41.0 31.0 41.0 29 36.64645301964303 38.0 35.0 41.0 31.0 41.0 30 36.57391086972639 38.0 35.0 41.0 31.0 41.0 31 36.499881187516515 38.0 35.0 41.0 31.0 41.0 32 36.39798570067999 38.0 35.0 41.0 31.0 41.0 33 36.23946988721369 38.0 35.0 41.0 30.0 41.0 34 36.13089808930516 38.0 35.0 40.0 30.0 41.0 35 36.08713137238874 38.0 35.0 40.0 30.0 41.0 36 35.954860761274354 38.0 35.0 40.0 30.0 41.0 37 35.86053980788497 38.0 35.0 40.0 30.0 41.0 38 35.78754522003121 38.0 35.0 40.0 30.0 41.0 39 35.694342054486455 37.0 35.0 40.0 30.0 41.0 40 35.62615699596418 37.0 35.0 40.0 30.0 41.0 41 35.59892042225006 37.0 35.0 40.0 29.0 41.0 42 35.4807086546815 37.0 34.0 40.0 29.0 41.0 43 35.3995654314604 37.0 34.0 40.0 29.0 41.0 44 35.32292852811293 37.0 34.0 40.0 29.0 41.0 45 35.25220753594315 37.0 34.0 40.0 28.0 41.0 46 35.163747364739116 36.0 34.0 40.0 28.0 41.0 47 35.062199760854234 36.0 34.0 40.0 28.0 41.0 48 35.0615705299417 36.0 34.0 40.0 28.0 41.0 49 35.02968981387312 36.0 34.0 40.0 28.0 41.0 50 34.91607751516523 36.0 34.0 40.0 28.0 41.0 51 34.8110244677676 36.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 4.0 11 4.0 12 10.0 13 7.0 14 12.0 15 22.0 16 61.0 17 119.0 18 281.0 19 452.0 20 865.0 21 1542.0 22 2406.0 23 3691.0 24 5536.0 25 8142.0 26 11128.0 27 13623.0 28 15539.0 29 18448.0 30 22511.0 31 27371.0 32 34597.0 33 45365.0 34 73934.0 35 171625.0 36 74129.0 37 96464.0 38 140899.0 39 283132.0 40 155.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 1.3856387073962197 92.2683489246995 2.738865369297714 3.6071469986065674 2 3.4511699702873737 2.189571495649562 91.71183125205545 2.6474272820076075 3 24.820593149937555 15.7321985632244 46.10865354089716 13.33855474594089 4 26.740317733095836 14.643305914580479 45.61600945937469 13.000366892949003 5 23.700714205600725 13.320305148477585 48.36314417752296 14.61583646839873 6 21.97432129556934 14.111025988567388 49.37780278648541 14.53684992937786 7 22.450806879337843 17.097211423487614 46.243244322189035 14.208737374985505 8 24.695317267350898 18.163482175275977 44.71607618446541 12.425124372907712 9 81.42656723170715 3.632905545026129 10.252471774906423 4.688055448360292 10 82.3291619062465 4.08220683257325 9.777697090900105 3.8109341702801505 11 75.9061590490439 6.555787688745511 10.566707031227722 6.971346230982873 12 45.457846281359366 21.556101353701912 16.430150616209062 16.555901748729656 13 36.87663842414726 20.39497071509907 26.114033370149365 16.61435749060431 14 30.843625662736034 24.393248409338472 26.86350251597315 17.899623411952344 15 19.06892834941896 33.485444995523146 31.38503038748078 16.060596267577118 16 13.53806466820901 40.210516710738176 29.859192949572176 16.39222567148063 17 13.372012341290285 23.503580533002307 45.16794382165581 17.9564633040516 18 16.22969019407306 21.03085512671114 42.524413589106516 20.21504109010929 19 17.025923933396573 20.590678637895667 28.344001110183846 34.03939631852391 20 20.16970224641139 22.647940551936262 35.33682863818082 21.845528563471532 21 25.28434203547646 24.363212613513447 27.670762053764076 22.68168329724602 22 25.92431359652041 23.728468801742835 26.66152129404854 23.685696307688215 23 21.220765000313666 28.25750562220672 29.338223971986864 21.18350540549275 24 26.79192987592175 21.590604498905975 25.007651523936435 26.60981410123584 25 21.963770747035866 28.0691165483928 23.19609382574296 26.77101887882837 26 22.16470641910581 23.15845403097489 33.808519900615735 20.86831964930357 27 24.61671092827718 23.44930699054633 30.769296573067777 21.164685508108715 28 19.442474797496004 30.7197755299512 26.487199618279256 23.35055005427354 29 19.082235347569288 30.623584943321692 25.77318411752741 24.520995591581613 30 19.243915375095764 26.167261362750672 32.811160389248705 21.77766287290486 31 17.322860092122447 23.829126737751384 33.425563503846675 25.422449666279494 32 18.323736453000635 30.280929740950768 28.079286896979124 23.31604690906948 33 25.426917015658535 26.5926100536272 23.23896136978437 24.741511560929894 34 24.99339402591823 26.22048935535198 26.76626637948897 22.019850239240817 35 25.24518144091978 25.236626942108852 24.147639243478146 25.370552373493222 36 19.68228591416226 25.24461114099905 25.610648640119837 29.46245430471885 37 18.82151323380966 27.1073057320845 30.14510330983064 23.926077724275196 38 26.63709344744401 25.76491476867685 24.331560967913028 23.266430815966118 39 22.4002402863666 28.323090113090476 26.0436963799262 23.232973220616724 40 20.991694532154458 28.509102937234694 26.270770798362857 24.22843173224799 41 18.643294508582066 30.516083408264404 24.5990316307346 26.24159045241893 42 24.44020310281177 24.07331015380989 25.56664049623697 25.919846247141372 43 19.9285604299301 22.66723569925424 27.617248911202402 29.78695495961326 44 19.72021085889069 26.06090042753484 25.4319546649583 28.78693404861617 45 19.46994424367775 23.459762489093013 28.92722782911533 28.143065438113908 46 22.79298683177483 24.76118690819502 29.10753765405227 23.338288605977883 47 17.36135533677161 30.30260113793844 26.618368600046765 25.717674925243184 48 20.484888002600567 28.871813686817898 25.375685072779774 25.26761323780176 49 20.909951543516737 25.641159685878804 28.962206224253332 24.486682546351126 50 20.38622611631457 22.86512977174696 32.82351688753115 23.925127224407316 51 19.886358235796205 22.254338556646942 30.478158463535976 27.38114474402088 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1283.0 1 1228.0 2 1173.0 3 3070.0 4 4967.0 5 3353.0 6 1739.0 7 1992.0 8 2245.0 9 2504.5 10 2764.0 11 2929.5 12 3095.0 13 3029.5 14 2964.0 15 3470.0 16 3976.0 17 3745.5 18 3515.0 19 3703.0 20 3891.0 21 3845.0 22 3799.0 23 4157.5 24 4516.0 25 5421.5 26 7251.5 27 8176.0 28 8987.0 29 9798.0 30 12183.5 31 14569.0 32 17956.0 33 21343.0 34 25138.5 35 28934.0 36 34313.5 37 39693.0 38 49748.5 39 59804.0 40 71058.0 41 82312.0 42 90621.5 43 98931.0 44 99270.5 45 99610.0 46 104386.5 47 109163.0 48 110245.5 49 111328.0 50 103823.5 51 96319.0 52 78432.5 53 60546.0 54 51420.5 55 42295.0 56 39280.0 57 36265.0 58 33267.5 59 30270.0 60 26137.0 61 22004.0 62 17445.0 63 12886.0 64 11715.0 65 10544.0 66 7967.5 67 5391.0 68 4226.5 69 3062.0 70 2051.5 71 1041.0 72 843.5 73 646.0 74 533.0 75 359.5 76 299.0 77 225.0 78 151.0 79 80.0 80 9.0 81 8.5 82 8.0 83 5.0 84 2.0 85 2.0 86 2.0 87 1.5 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1052078.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.477120337861344 #Duplication Level Percentage of deduplicated Percentage of total 1 70.69532766924925 11.648554213307587 2 11.75250366213083 3.872948342241716 3 5.264789378995265 2.6024570445359783 4 2.873698904910927 1.8940113068399083 5 1.7596431777087462 1.4496926195401874 6 1.1432924554238304 1.1302900421632458 7 0.7701531258796082 0.8882934013588865 8 0.6213264733305554 0.8190136856133247 9 0.46094808398542164 0.683558734440097 >10 2.570976785969646 8.208090091651817 >50 0.5553898755873865 6.744644075811923 >100 1.5007097263267497 53.602637931453046 >500 0.020248589214123452 2.146439079840815 >1k 0.01041356016726349 3.583848809596984 >5k 5.785311204035272E-4 0.7255206216044963 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 7611 0.7234254494438626 Illumina PCR Primer Index 7 (95% over 22bp) ATCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTG 4240 0.40301194398133977 RNA PCR Primer, Index 16 (95% over 24bp) CTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGCT 3440 0.3269719545508983 RNA PCR Primer, Index 16 (96% over 26bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3074 0.29218365938647134 No Hit ATGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCT 2714 0.2579656641427727 RNA PCR Primer, Index 16 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCTGC 2583 0.2455141158735379 RNA PCR Primer, Index 16 (96% over 25bp) TAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 2415 0.2295457180931452 No Hit ATTGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 2329 0.22137141922937273 No Hit ATATCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 2134 0.20283667180570264 RNA PCR Primer, Index 16 (95% over 22bp) ATGCCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 1954 0.18572767418385328 No Hit ATGTCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 1844 0.17527217563716757 RNA PCR Primer, Index 16 (95% over 22bp) ATTTCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 1775 0.16871372654879202 No Hit ATGTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 1598 0.15188987888730682 No Hit ATGGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 1447 0.13753733088231102 RNA PCR Primer, Index 16 (95% over 22bp) ATAGCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 1352 0.12850758213744606 RNA PCR Primer, Index 16 (95% over 22bp) ATCCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTCT 1315 0.12499073262628817 No Hit ATTTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTT 1172 0.11139858451559677 No Hit ATTCCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 1144 0.1087371848855313 RNA PCR Primer, Index 16 (95% over 22bp) ATACCTGTCTCTTATACACATCTGACGCAGTCCACCTCGTATGCCGTCTTC 1066 0.10132328591606327 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.36774839888297256 0.0 2 0.0 0.0 0.0 1.4804035442239074 0.0 3 0.0 0.0 0.0 2.0715194120588016 0.0 4 0.0 0.0 0.0 2.6721402785725012 0.0 5 0.0 0.0 0.0 4.777877685875001 0.0 6 0.0 0.0 0.0 5.217293774796166 0.0 7 0.0 0.0 0.0 5.9233250766578145 0.0 8 0.0 0.0 0.0 8.130670919836742 0.0 9 0.0 0.0 0.0 8.410307980967191 0.0 10 9.504998678805184E-5 0.0 0.0 8.9782316520258 0.0 11 9.504998678805184E-5 0.0 0.0 9.368031647843601 0.0 12 9.504998678805184E-5 0.0 0.0 10.409589403067073 0.0 13 9.504998678805184E-5 0.0 0.0 11.387653767116126 0.0 14 9.504998678805184E-5 0.0 0.0 11.849216502958907 0.0 15 1.9009997357610368E-4 0.0 0.0 12.068021572545002 0.0 16 1.9009997357610368E-4 0.0 0.0 12.20422820361228 0.0 17 1.9009997357610368E-4 0.0 0.0 12.39347272730729 0.0 18 1.9009997357610368E-4 0.0 0.0 12.846005714405205 0.0 19 1.9009997357610368E-4 0.0 0.0 13.435505732464703 0.0 20 2.851499603641555E-4 0.0 0.0 14.176230279503992 0.0 21 2.851499603641555E-4 0.0 0.0 14.570212474740465 0.0 22 2.851499603641555E-4 0.0 0.0 15.017612762551826 0.0 23 2.851499603641555E-4 0.0 0.0 15.60825338045278 0.0 24 2.851499603641555E-4 0.0 0.0 16.08977661352105 0.0 25 0.0025663496432773996 0.0 0.0 16.665779533456647 0.0 26 0.0026613996300654513 0.0 0.0 17.07725092626212 0.0 27 0.0026613996300654513 0.0 0.0 17.436539876320957 0.0 28 0.0027564496168535034 0.0 0.0 17.768739580145198 0.0 29 0.0027564496168535034 0.0 0.0 18.066436138765376 0.0 30 0.0027564496168535034 0.0 0.0 18.384568444544986 0.0 31 0.0027564496168535034 0.0 0.0 18.717243398303168 0.0 32 0.0027564496168535034 0.0 0.0 19.13270689055374 0.0 33 0.0027564496168535034 0.0 0.0 19.51138603791734 0.0 34 0.0027564496168535034 0.0 0.0 19.85147489064499 0.0 35 0.0027564496168535034 0.0 0.0 20.192704343214096 0.0 36 0.0027564496168535034 0.0 0.0 20.519296097817843 0.0 37 0.0027564496168535034 0.0 0.0 20.969547885232846 0.0 38 0.0027564496168535034 0.0 0.0 21.352124082054754 0.0 39 0.0027564496168535034 0.0 0.0 21.69630008421429 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGATCCG 30 2.165325E-6 45.000004 15 TTCTACG 30 2.165325E-6 45.000004 25 TAGAGAC 30 2.165325E-6 45.000004 25 GTCGATT 30 2.165325E-6 45.000004 28 CACGGTT 30 2.165325E-6 45.000004 18 CGAAATG 30 2.165325E-6 45.000004 37 CACGGCT 30 2.165325E-6 45.000004 27 CAACGAC 30 2.165325E-6 45.000004 38 GCGAAGT 30 2.165325E-6 45.000004 3 TAGCGTA 60 0.0 45.000004 26 ACTCTAC 30 2.165325E-6 45.000004 25 GATCCGT 30 2.165325E-6 45.000004 29 ATTCGAT 130 0.0 45.000004 1 TCCTATC 30 2.165325E-6 45.000004 8 ATGTCCA 30 2.165325E-6 45.000004 14 ATCACGG 30 2.165325E-6 45.000004 38 CCGTCCG 30 2.165325E-6 45.000004 13 GCCGCAA 30 2.165325E-6 45.000004 45 CCCCGTT 30 2.165325E-6 45.000004 17 GCCGAGT 30 2.165325E-6 45.000004 30 >>END_MODULE