##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1545647_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1661019 Sequences flagged as poor quality 0 Sequence length 52 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.596176202680404 33.0 31.0 34.0 31.0 34.0 2 33.008854805393554 34.0 33.0 34.0 31.0 34.0 3 33.08875756388097 34.0 33.0 34.0 31.0 34.0 4 36.45124649386913 37.0 37.0 37.0 35.0 37.0 5 36.441999158347976 37.0 37.0 37.0 35.0 37.0 6 36.449501781737595 37.0 37.0 37.0 35.0 37.0 7 36.51166603151439 37.0 37.0 37.0 35.0 37.0 8 36.53312876011653 37.0 37.0 37.0 35.0 37.0 9 38.343201974209805 39.0 39.0 39.0 37.0 39.0 10 38.12210396148389 39.0 39.0 39.0 35.0 39.0 11 37.96155131277848 39.0 38.0 39.0 35.0 39.0 12 37.63833706899199 39.0 37.0 39.0 35.0 39.0 13 37.60378598920301 39.0 37.0 39.0 35.0 39.0 14 38.972138789502104 41.0 38.0 41.0 35.0 41.0 15 38.96207930192249 41.0 38.0 41.0 35.0 41.0 16 39.026648099750815 41.0 38.0 41.0 35.0 41.0 17 38.98418862156303 41.0 38.0 41.0 35.0 41.0 18 38.957429746438784 41.0 38.0 41.0 35.0 41.0 19 38.93438064224431 41.0 38.0 41.0 35.0 41.0 20 38.86951865090044 40.0 38.0 41.0 35.0 41.0 21 38.77917290530692 40.0 38.0 41.0 35.0 41.0 22 38.876380703652394 41.0 38.0 41.0 35.0 41.0 23 38.863765555962935 41.0 38.0 41.0 35.0 41.0 24 38.844184804628966 41.0 38.0 41.0 35.0 41.0 25 38.759009379182295 41.0 38.0 41.0 35.0 41.0 26 38.65411473318487 40.0 38.0 41.0 35.0 41.0 27 38.57283751721082 40.0 37.0 41.0 35.0 41.0 28 38.53331117825865 40.0 37.0 41.0 35.0 41.0 29 38.50209178823361 40.0 37.0 41.0 35.0 41.0 30 38.400973137573985 40.0 37.0 41.0 35.0 41.0 31 38.34501170666922 40.0 36.0 41.0 35.0 41.0 32 38.16839783289655 40.0 36.0 41.0 34.0 41.0 33 38.15057202837535 40.0 36.0 41.0 34.0 41.0 34 38.02754513945957 40.0 36.0 41.0 34.0 41.0 35 37.83007539347834 40.0 35.0 41.0 34.0 41.0 36 37.86574566576301 40.0 35.0 41.0 34.0 41.0 37 37.790393126147265 40.0 35.0 41.0 34.0 41.0 38 37.74526119207547 40.0 35.0 41.0 34.0 41.0 39 37.59002154701421 40.0 35.0 41.0 33.0 41.0 40 37.43628640009536 39.0 35.0 41.0 33.0 41.0 41 37.33753256284245 39.0 35.0 41.0 33.0 41.0 42 37.291882272267806 39.0 35.0 41.0 33.0 41.0 43 37.232675243329545 39.0 35.0 41.0 33.0 41.0 44 37.11779215048112 39.0 35.0 41.0 33.0 41.0 45 37.012975769693185 39.0 35.0 41.0 33.0 41.0 46 36.98366364261938 39.0 35.0 41.0 33.0 41.0 47 36.93598086475832 39.0 35.0 41.0 33.0 41.0 48 36.82314049387755 38.0 35.0 41.0 33.0 41.0 49 36.721610649848074 38.0 35.0 40.0 32.0 41.0 50 36.606781740606216 38.0 35.0 40.0 32.0 41.0 51 36.47601081023155 38.0 35.0 40.0 32.0 41.0 52 36.12141281948009 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 2.0 10 3.0 11 6.0 12 8.0 13 15.0 14 26.0 15 48.0 16 86.0 17 156.0 18 219.0 19 354.0 20 707.0 21 1056.0 22 1675.0 23 2511.0 24 3268.0 25 4340.0 26 5643.0 27 7113.0 28 9019.0 29 11542.0 30 14973.0 31 19558.0 32 26018.0 33 37771.0 34 87636.0 35 170572.0 36 99103.0 37 150539.0 38 266400.0 39 739665.0 40 981.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.368971095454054 13.33013048014502 45.67912829413751 12.62177013026341 2 25.374604384417037 12.706055740482197 49.3225544078665 12.59678546723427 3 26.770494497654752 14.069796913822177 44.98052099343837 14.179187595084706 4 24.59315636967428 14.6519696644048 45.349752170203956 15.405121795716967 5 23.767458409566657 17.179875726888135 43.14688754312865 15.905778320416564 6 26.539732537677175 19.741797053495475 42.341779353517325 11.376691055310022 7 86.85258868200785 2.992018754752354 6.191380110642925 3.9640124525968696 8 87.17486073308012 3.492976299488446 6.244359637066163 3.0878033303652757 9 80.00113183533722 5.399577006644717 8.353607032791317 6.245684125226743 10 43.72291948496676 23.56523314904887 13.664864760728204 19.046982605256172 11 34.551260400994806 23.571735181837173 23.194015240042408 18.68298917712561 12 30.543299023069576 23.257289651713798 25.699164187766666 20.50024713744996 13 23.152715291035204 24.122662052631547 31.68464659344655 21.039976062886698 14 19.360404667255462 31.691570054285954 28.7758899807889 20.172135297669683 15 18.26174173805357 23.99159792874133 37.0197451082739 20.726915224931204 16 22.428822307270416 21.815764900943336 34.436210543046165 21.31920224874008 17 23.167766292859984 21.286752288805847 27.545560887623804 27.999920530710366 18 23.257289651713798 23.494613848486985 28.908218388832395 24.339878110966822 19 27.291620384836058 24.941436551899766 26.321372603203212 21.44557046006096 20 30.335836013916754 21.104033126652975 25.0297558306076 23.530375028822668 21 27.256762264609858 24.063601921471097 26.200543160553853 22.479092653365193 22 28.67649316473803 22.00745446018378 23.9729948904859 25.34305748459229 23 28.943076509058596 24.621753273141366 22.363139735307062 24.072030482492977 24 27.804618731031976 20.171232237560197 26.783859787275162 25.24028924413267 25 29.33145256014531 21.68698852933049 24.18093953169711 24.800619378827093 26 24.580272712112265 26.239314541254494 23.89840212544227 25.28201062119097 27 24.75191433692209 24.161252821310292 25.883388450102018 25.2034443916656 28 24.919582497250182 23.68949422011428 27.24050718263909 24.15041609999645 29 26.19301765964146 23.57823721462548 24.94679470854939 25.28195041718367 30 25.936428180532552 23.93482554985825 26.275015517582883 23.853730752026316 31 27.3579049968724 24.442345331389948 22.144117556752814 26.05563211498484 32 30.433306301734053 24.702667458951403 23.79160021649361 21.07242602282093 33 30.161605616793064 24.19255890510584 22.94573391394078 22.700101564160313 34 26.450510198859856 24.733552114695858 25.657503014715665 23.15843467172862 35 24.95594571765886 22.559103779065744 27.89733290227264 24.58761760100276 36 28.390584334074443 25.56785924784726 22.739776004970444 23.301780413107856 37 28.443925084541476 27.441648771025495 23.340009957742808 20.774416186690218 38 26.185913586780163 25.152812821527025 25.74907330981765 22.912200281875162 39 26.004940340838967 25.32884933886969 24.10995900709143 24.55625131319991 40 27.048516603362156 22.07668906857778 28.280290592702436 22.594503735357634 41 23.54139236215841 24.17269158269713 27.41828961619343 24.867626438951028 42 24.444211655616222 25.641368340759495 24.169259954281078 25.745160049343202 43 24.043553987040486 23.23880702147296 25.964603655948547 26.753035335538005 44 28.29696710272429 22.730564791853674 24.680151160221527 24.292316945200508 45 23.757946176413395 23.033571560590214 25.954128158678497 27.25435410431789 46 22.98396345857573 25.206454592030553 24.563656406097703 27.24592554329601 47 25.37165438805938 22.90678192121824 28.138991787571367 23.582571903151017 48 24.748302096484146 20.575261330544684 30.285505463814683 24.39093110915649 49 23.52561891224604 22.525750759022024 26.266285936524508 27.682344392207437 50 22.560127247189826 23.645244274749416 28.985038702146092 24.809589775914663 51 24.368475014433912 24.19141502896716 26.012345433736762 25.427764522862173 52 23.586184143588966 23.085888842933162 27.660129113514053 25.66779789996382 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 199.0 1 160.0 2 121.0 3 110.5 4 100.0 5 141.0 6 182.0 7 272.5 8 363.0 9 653.5 10 944.0 11 829.5 12 715.0 13 945.0 14 1186.0 15 1197.0 16 1253.5 17 1310.0 18 1425.5 19 1541.0 20 1765.5 21 1990.0 22 3218.5 23 4447.0 24 5786.5 25 7126.0 26 7681.0 27 8236.0 28 10978.0 29 13720.0 30 15370.5 31 17021.0 32 19844.5 33 22668.0 34 26593.5 35 30519.0 36 30826.0 37 31133.0 38 37110.5 39 50580.0 40 58072.0 41 68532.5 42 78993.0 43 82610.5 44 86228.0 45 91119.5 46 96011.0 47 108571.5 48 121132.0 49 137230.5 50 153329.0 51 158287.5 52 163246.0 53 145662.5 54 128079.0 55 117716.0 56 107353.0 57 109356.5 58 111360.0 59 105119.5 60 98879.0 61 89224.0 62 79569.0 63 72344.5 64 53456.5 65 41793.0 66 34763.0 67 27733.0 68 23703.0 69 19673.0 70 16965.0 71 14257.0 72 11662.5 73 9068.0 74 7398.0 75 5728.0 76 4591.0 77 3454.0 78 2675.5 79 1897.0 80 1573.0 81 1249.0 82 880.5 83 512.0 84 373.5 85 235.0 86 194.0 87 153.0 88 95.5 89 39.5 90 41.0 91 22.0 92 3.0 93 5.0 94 7.0 95 5.5 96 4.0 97 3.5 98 3.0 99 4.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 52 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 52 1661019.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.744512832303553 #Duplication Level Percentage of deduplicated Percentage of total 1 69.49044721464558 11.635836851081459 2 12.109764493627226 4.055442139194302 3 4.942807007123487 2.4829468607513747 4 2.6798807455106735 1.7949319012898677 5 1.633676006861526 1.3677554430359624 6 0.9998018396991233 1.0044716840761603 7 0.702307484533082 0.8231857680890915 8 0.522535629543055 0.6999683643375599 9 0.4116106127000249 0.6202997267641106 >10 3.2528178261030605 12.477113185519645 >50 1.5429153733977727 18.937130447521938 >100 1.6999375624930848 40.9754041881497 >500 0.00610842074875927 0.6722970505249465 >1k 0.005030464146037045 2.017372481125958 >5k 3.593188675740747E-4 0.43584390853791943 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCTT 7244 0.43611782887492556 Illumina Single End Adapter 1 (95% over 22bp) GTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 4119 0.2479803060651323 No Hit GCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCT 3778 0.22745073957612766 Illumina Single End Adapter 1 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 3544 0.21336300186813034 No Hit GCCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 3267 0.19668649184627027 No Hit TTCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 2762 0.16628346816020767 No Hit ATCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 2470 0.14870389802886058 No Hit GGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 2404 0.14473043354711776 No Hit CCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGCT 2173 0.13082330786101784 Illumina Single End Adapter 1 (95% over 21bp) AGCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 1983 0.11938454647418242 No Hit TCCTGTCTCTTATACACATCTGACGCTCGGGTGATCGTATGCCGTCTTCTGC 1959 0.1179396502990032 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4573096394442207 0.0 2 0.0 0.0 0.0 0.9301519127716179 0.0 3 0.0 0.0 0.0 2.7245323503223022 0.0 4 0.0 0.0 0.0 3.103576780277649 0.0 5 0.0 0.0 0.0 3.759499439801712 0.0 6 0.0 0.0 0.0 5.760560234410323 0.0 7 0.0 0.0 0.0 6.0268425586943914 0.0 8 0.0 0.0 0.0 6.533158260080107 0.0 9 6.020400729913385E-5 0.0 0.0 6.858139491480832 0.0 10 6.020400729913385E-5 0.0 0.0 7.946567739441873 0.0 11 6.020400729913385E-5 0.0 0.0 8.881836992833916 0.0 12 6.020400729913385E-5 0.0 0.0 9.290260978351242 0.0 13 6.020400729913385E-5 0.0 0.0 9.501577043971201 0.0 14 6.020400729913385E-5 0.0 0.0 9.647872781708097 0.0 15 6.020400729913385E-5 0.0 0.0 9.839140912897443 0.0 16 6.020400729913385E-5 0.0 0.0 10.279653634305207 0.0 17 6.020400729913385E-5 0.0 0.0 10.834915193625118 0.0 18 6.020400729913385E-5 0.0 0.0 11.504744978835282 0.0 19 6.020400729913385E-5 0.0 0.0 11.934119958892703 0.0 20 6.020400729913385E-5 0.0 0.0 12.389202050066856 0.0 21 1.204080145982677E-4 0.0 0.0 13.05969407935731 0.0 22 1.204080145982677E-4 0.0 0.0 13.625732155983767 0.0 23 1.204080145982677E-4 0.0 0.0 14.23710385010647 0.0 24 1.204080145982677E-4 0.0 0.0 14.69314920539741 0.0 25 1.204080145982677E-4 0.0 0.0 15.106509919513263 0.0 26 1.204080145982677E-4 0.0 0.0 15.474296200103671 0.0 27 1.8061202189740153E-4 0.0 0.0 15.814027413292683 0.0 28 1.8061202189740153E-4 0.0 0.0 16.17139840062034 0.0 29 1.8061202189740153E-4 0.0 0.0 16.544603041867674 0.0 30 1.8061202189740153E-4 0.0 0.0 16.936591333392332 0.0 31 1.8061202189740153E-4 0.0 0.0 17.324967384479045 0.0 32 1.8061202189740153E-4 0.0 0.0 17.721470976551142 0.0 33 1.8061202189740153E-4 0.0 0.0 18.10183989466707 0.0 34 1.8061202189740153E-4 0.0 0.0 18.476730248118777 0.0 35 1.8061202189740153E-4 0.0 0.0 18.88100015713246 0.0 36 1.8061202189740153E-4 0.0 0.0 19.277503749204556 0.0 37 1.8061202189740153E-4 0.0 0.0 19.68159304619634 0.0 38 3.010200364956692E-4 0.0 0.0 20.067019100925396 0.0 39 4.214280510939369E-4 0.0 0.0 20.466954321413542 0.0 40 4.214280510939369E-4 0.0 0.0 20.897774197646143 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTGATA 35 1.01994374E-7 46.000004 12 TCTATCG 35 1.01994374E-7 46.000004 1 CGAGTTG 60 0.0 46.0 1 GTCGACG 20 6.312271E-4 46.0 12 CCGATAA 20 6.312271E-4 46.0 46 AACCCGT 20 6.312271E-4 46.0 43 TAGCGAT 30 1.8619066E-6 46.0 14 ATTAACG 25 3.417817E-5 46.0 1 CTAAGCG 20 6.312271E-4 46.0 15 TCGATTG 30 1.8619066E-6 46.0 1 TTATACG 25 3.417817E-5 46.0 39 TACGCTA 30 1.8619066E-6 46.0 21 TCAATCG 30 1.8619066E-6 46.0 41 TACGCGA 20 6.312271E-4 46.0 39 CTACGTA 20 6.312271E-4 46.0 23 TTGACGA 20 6.312271E-4 46.0 28 TCTAACG 25 3.417817E-5 46.0 1 TCATGCG 45 3.110472E-10 46.0 1 TGTTACG 45 3.110472E-10 46.0 1 CATACCG 30 1.8619066E-6 46.0 28 >>END_MODULE